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The map label for this gene is cirA [H]

Identifier: 197104930

GI number: 197104930

Start: 1663749

End: 1666238

Strand: Reverse

Name: cirA [H]

Synonym: PHZ_c1465

Alternate gene names: 197104930

Gene position: 1666238-1663749 (Counterclockwise)

Preceding gene: 197104931

Following gene: 197104929

Centisome position: 41.69

GC content: 69.68

Gene sequence:

>2490_bases
ATGGGATACCGGCGCTCGGCCGCTCGCGCGGCGCTTCTGGCTTCTGTTTCCGCTCTCGGGAGCGGTCTCATCCTCGGCCT
GCCGGCGGCCGCATCCGCGCAGGACGCTGCGGCCGGGCAGGTGGACGAGGTGGTCGTCACCGGCACCCGGCGCGCCGGCG
TGACCCTGACGGAGTCCTCGACGCCCGTGGACGTGGTGTCGGGCGAAACGCTGCAGCGGCAGGGCGCCTCGGACCTCAAT
GACGCCCTGAAGACCACCGTTGTCTCCCTGAACGTCCAGAAGTTCGTGGCGCAGGACGCCTCGGCCTTCGTCCGTCCCTT
CAGCCTCCGGGGCCTGCCGCCGGACCAGACGCTCGTGCTGGTGAACGGCAAGCGGCGGCATCGCTCGGCCGTGGTGCAGA
TCACCAACCAGCCGCTCGCCGCCGGCGCCCAGGGGCCGGACCTTTCGGCGATCCCGGCCATCGCCGTCGACCGCATCGAG
GTGCTCCGCGACGGCGCGGCGGCCCAATATGGGTCCGACGCCATCGCCGGGGTGATCAACTTCCAGCTGAAGCGGGCCCG
CGAGGGGGTCACCGCCATCGCCCGCTACGGCCAGTTCTACGAGGGCGACGGCGAGGACTACAACCTGCAGCTCAACGTCG
GACTGCCGCTGGGCGAAGAGGGCTTCTTCAACGTCAGCGGCGAGCTCTCCAGCTCCGCCAAGACGTCCCGCGGGCGCCAG
CGGCCCGACGCTCAGGCCCTGATCGACGCCGGCAACACGGCGGTGCCCGACCCGGCCCAGCGCTGGGGCGCGCCCAGCGT
CGACGCCGCGCGCCTGTTCTTCAACGCTGAACTCCCCACAAGCGGGACGGCCACGGCCTACGCCTTCGGAAACTTCGGCC
AGGCCTCGGCCGAGTCAGACTTCTTCTACCGTCCGCTGAACCGCGCCGATGTCTTCGCCAGCGTGCCATTGACGAACCAG
CCGGGCGGGCCCCGCTTCAGCTTCACAAGCCGGTTCCCGGGCGGCTTCGCGCCGGTCTTCCGCAGCAACATGCTCGACAT
GAGCCTGACGGGCGGCGTCAAGGGGGAGGCCTTCGGGGGACTGCGCTACGACCTCAGCGCCGGGCTCGCGCAGAACGAGA
TCGAATTCAAGCTCGACAACACGGTCAACCCGTCCCTCGGGCCGGACTCGCCCGCCTCCTTCCGCGCCGGCGAGCTGCAG
CAGCGCGAGGCCCGGCTCAACGCCGACTTCGTCTACCCTGTCGAGACGGGAATGTTCGCCGAGCCGCTGAACGTGGCGTT
CGGGGCGGAGTACCGGCGCGAGACCTTCGAGATCAAGGCGGGCGAGCCCGCGTCCTACCAGGCCGGGCGGTTCGCCAGCC
TCACCGATCCCGACACCGGCCGGATCATCGGGCTGGCGGTGGGCTCCAGCGGCTTCCCGGGCTACACGCCGGCTTCCGCA
GGCGCCTTCTCGCGCAGCAACTGGGCGGCCTACGTCGACCTGGAGACCGAGGTCGTCGAGCGGCTGACCGTCGGTGCGGC
GGCCCGCTACGAGGACTTCTCCGACTTCGGCTCCACCTTCAACTGGAAGCTGACCGCCCGCTACGAGCTCTTCGACGGCC
TGGCCCTGCGCGGCTCGGTCAACACCGGCTTCCGCGCGCCGACGCCCGGACAGTCCAACATCTCCGACGTTGCCACCAAC
ATCGACCCGCTCACCGGCGGGCTGCTGCTGATCGCCACGCGGCCGCCCACCGACCCGATCGCCCAGTACTACGGCGCGAA
GCCGCTCAAGGAGGAGGAGTCGAAGAACTTCGCCTTCGGCGCCGTGCTCGACGTGGCCGGCTGGGTGCTGACGGCGGACT
ATTTCAACATCGAGGTGAAGGACCGCATCGCCCTCACCTCGCGCATTCCGATCACCGCGGCCGACCGCGCCGCCCTCGCC
GCCCGCGGCACGCCGGCCGGGGACCTGCAGAGCGTCCGCTTCTTCGGCAACTTCTTCGACACCGAGACCGAGGGTCTGGA
TGTGGTGCTGTCCAGGTCCTGGCCGTTGGACATCGGAAGGGTCGGCCTCACGGCGGCGGCCAACTACACCCGCAGCAAGG
TGACCAACCTTCGCGACGCCCGCGCGGTGGATCGTGAGCGGCGGATCGAAATCGGCCGGTTCAATCCCCGCTGGCGGGGC
AATGTCACGGGCACCTGGGAGAGTGGCCGCTGGAACGTGCTGCTGCGGGCGAACTACTACGGCGCGTGGGTCGATGCGGT
GCCCAACGCCACGCCGACAGCGCTGTCCTTCGATCAGGGTTTCGGCGCGGAATGGCTCGTCGACGCCGAGGTCAGCTACC
AGGCGACCGAGAACATCTCCATCGCCGTGGGCGCGGACAACCTGCTCGACGCCTACCCCGACAAGGACCGGCGCCAGGCG
CAGATCAACAACGGCATCGTCTATCCGCAGTTCTCGCCCTTCGGATTCAACGGCGGCTTCTGGTACGTGCGCCTGACCGG
CAAGTTCTGA

Upstream 100 bases:

>100_bases
TTTGAAGTCCTTCCCCGTGCATGTTCGGCTCTGGCCAAGGCTCGCGGGTTTCCGCGGCCGCGACCGCAGCAGCGGCACGA
AGACAACGATGGGGGAAGGC

Downstream 100 bases:

>100_bases
CCGCCGCCCGCCTCCGCTTCCTTCCCACGAGAGAGGGCCGCCCGGCGCGGCCCGAAGGCCCCGCATGACCACCGCTTCCT
TCGACGACCGCTTGAAAGAC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 829; Mature: 828

Protein sequence:

>829_residues
MGYRRSAARAALLASVSALGSGLILGLPAAASAQDAAAGQVDEVVVTGTRRAGVTLTESSTPVDVVSGETLQRQGASDLN
DALKTTVVSLNVQKFVAQDASAFVRPFSLRGLPPDQTLVLVNGKRRHRSAVVQITNQPLAAGAQGPDLSAIPAIAVDRIE
VLRDGAAAQYGSDAIAGVINFQLKRAREGVTAIARYGQFYEGDGEDYNLQLNVGLPLGEEGFFNVSGELSSSAKTSRGRQ
RPDAQALIDAGNTAVPDPAQRWGAPSVDAARLFFNAELPTSGTATAYAFGNFGQASAESDFFYRPLNRADVFASVPLTNQ
PGGPRFSFTSRFPGGFAPVFRSNMLDMSLTGGVKGEAFGGLRYDLSAGLAQNEIEFKLDNTVNPSLGPDSPASFRAGELQ
QREARLNADFVYPVETGMFAEPLNVAFGAEYRRETFEIKAGEPASYQAGRFASLTDPDTGRIIGLAVGSSGFPGYTPASA
GAFSRSNWAAYVDLETEVVERLTVGAAARYEDFSDFGSTFNWKLTARYELFDGLALRGSVNTGFRAPTPGQSNISDVATN
IDPLTGGLLLIATRPPTDPIAQYYGAKPLKEEESKNFAFGAVLDVAGWVLTADYFNIEVKDRIALTSRIPITAADRAALA
ARGTPAGDLQSVRFFGNFFDTETEGLDVVLSRSWPLDIGRVGLTAAANYTRSKVTNLRDARAVDRERRIEIGRFNPRWRG
NVTGTWESGRWNVLLRANYYGAWVDAVPNATPTALSFDQGFGAEWLVDAEVSYQATENISIAVGADNLLDAYPDKDRRQA
QINNGIVYPQFSPFGFNGGFWYVRLTGKF

Sequences:

>Translated_829_residues
MGYRRSAARAALLASVSALGSGLILGLPAAASAQDAAAGQVDEVVVTGTRRAGVTLTESSTPVDVVSGETLQRQGASDLN
DALKTTVVSLNVQKFVAQDASAFVRPFSLRGLPPDQTLVLVNGKRRHRSAVVQITNQPLAAGAQGPDLSAIPAIAVDRIE
VLRDGAAAQYGSDAIAGVINFQLKRAREGVTAIARYGQFYEGDGEDYNLQLNVGLPLGEEGFFNVSGELSSSAKTSRGRQ
RPDAQALIDAGNTAVPDPAQRWGAPSVDAARLFFNAELPTSGTATAYAFGNFGQASAESDFFYRPLNRADVFASVPLTNQ
PGGPRFSFTSRFPGGFAPVFRSNMLDMSLTGGVKGEAFGGLRYDLSAGLAQNEIEFKLDNTVNPSLGPDSPASFRAGELQ
QREARLNADFVYPVETGMFAEPLNVAFGAEYRRETFEIKAGEPASYQAGRFASLTDPDTGRIIGLAVGSSGFPGYTPASA
GAFSRSNWAAYVDLETEVVERLTVGAAARYEDFSDFGSTFNWKLTARYELFDGLALRGSVNTGFRAPTPGQSNISDVATN
IDPLTGGLLLIATRPPTDPIAQYYGAKPLKEEESKNFAFGAVLDVAGWVLTADYFNIEVKDRIALTSRIPITAADRAALA
ARGTPAGDLQSVRFFGNFFDTETEGLDVVLSRSWPLDIGRVGLTAAANYTRSKVTNLRDARAVDRERRIEIGRFNPRWRG
NVTGTWESGRWNVLLRANYYGAWVDAVPNATPTALSFDQGFGAEWLVDAEVSYQATENISIAVGADNLLDAYPDKDRRQA
QINNGIVYPQFSPFGFNGGFWYVRLTGKF
>Mature_828_residues
GYRRSAARAALLASVSALGSGLILGLPAAASAQDAAAGQVDEVVVTGTRRAGVTLTESSTPVDVVSGETLQRQGASDLND
ALKTTVVSLNVQKFVAQDASAFVRPFSLRGLPPDQTLVLVNGKRRHRSAVVQITNQPLAAGAQGPDLSAIPAIAVDRIEV
LRDGAAAQYGSDAIAGVINFQLKRAREGVTAIARYGQFYEGDGEDYNLQLNVGLPLGEEGFFNVSGELSSSAKTSRGRQR
PDAQALIDAGNTAVPDPAQRWGAPSVDAARLFFNAELPTSGTATAYAFGNFGQASAESDFFYRPLNRADVFASVPLTNQP
GGPRFSFTSRFPGGFAPVFRSNMLDMSLTGGVKGEAFGGLRYDLSAGLAQNEIEFKLDNTVNPSLGPDSPASFRAGELQQ
REARLNADFVYPVETGMFAEPLNVAFGAEYRRETFEIKAGEPASYQAGRFASLTDPDTGRIIGLAVGSSGFPGYTPASAG
AFSRSNWAAYVDLETEVVERLTVGAAARYEDFSDFGSTFNWKLTARYELFDGLALRGSVNTGFRAPTPGQSNISDVATNI
DPLTGGLLLIATRPPTDPIAQYYGAKPLKEEESKNFAFGAVLDVAGWVLTADYFNIEVKDRIALTSRIPITAADRAALAA
RGTPAGDLQSVRFFGNFFDTETEGLDVVLSRSWPLDIGRVGLTAAANYTRSKVTNLRDARAVDRERRIEIGRFNPRWRGN
VTGTWESGRWNVLLRANYYGAWVDAVPNATPTALSFDQGFGAEWLVDAEVSYQATENISIAVGADNLLDAYPDKDRRQAQ
INNGIVYPQFSPFGFNGGFWYVRLTGKF

Specific function: Not yet known. Postulated to participate in iron transport. Outer membrane receptor for colicins IA and IB [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB-dependent receptor family [H]

Homologues:

Organism=Escherichia coli, GI1788478, Length=234, Percent_Identity=29.4871794871795, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012910
- InterPro:   IPR000531
- InterPro:   IPR010916
- InterPro:   IPR010917 [H]

Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]

EC number: NA

Molecular weight: Translated: 88890; Mature: 88759

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRRSAARAALLASVSALGSGLILGLPAAASAQDAAAGQVDEVVVTGTRRAGVTLTESS
CCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCCCCEEEEECCCCCCEEEECCC
TPVDVVSGETLQRQGASDLNDALKTTVVSLNVQKFVAQDASAFVRPFSLRGLPPDQTLVL
CCEEEECCCHHHHCCCHHHHHHHHHEEEEEEHHHHHHHCHHHHHCCEECCCCCCCCEEEE
VNGKRRHRSAVVQITNQPLAAGAQGPDLSAIPAIAVDRIEVLRDGAAAQYGSDAIAGVIN
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHH
FQLKRAREGVTAIARYGQFYEGDGEDYNLQLNVGLPLGEEGFFNVSGELSSSAKTSRGRQ
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHCCCC
RPDAQALIDAGNTAVPDPAQRWGAPSVDAARLFFNAELPTSGTATAYAFGNFGQASAESD
CCCHHHHEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCC
FFYRPLNRADVFASVPLTNQPGGPRFSFTSRFPGGFAPVFRSNMLDMSLTGGVKGEAFGG
CEECCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCCCC
LRYDLSAGLAQNEIEFKLDNTVNPSLGPDSPASFRAGELQQREARLNADFVYPVETGMFA
EEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC
EPLNVAFGAEYRRETFEIKAGEPASYQAGRFASLTDPDTGRIIGLAVGSSGFPGYTPASA
CCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCC
GAFSRSNWAAYVDLETEVVERLTVGAAARYEDFSDFGSTFNWKLTARYELFDGLALRGSV
CCCCCCCEEEEEEEHHHHHHHHHHCHHHCCCCHHHHCCEEEEEEEEEEEEECCEEEECCC
NTGFRAPTPGQSNISDVATNIDPLTGGLLLIATRPPTDPIAQYYGAKPLKEEESKNFAFG
CCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEH
AVLDVAGWVLTADYFNIEVKDRIALTSRIPITAADRAALAARGTPAGDLQSVRFFGNFFD
HHHHHHCEEEEEEEEEEEEECEEEEEECCCEEECCCHHHEECCCCCCCHHHHHHHHHHCC
TETEGLDVVLSRSWPLDIGRVGLTAAANYTRSKVTNLRDARAVDRERRIEIGRFNPRWRG
CCCCCEEEEEECCCCCCCCCCCEEHHCCHHHHHHHCCHHHHHHCHHHCEEEECCCCCCCC
NVTGTWESGRWNVLLRANYYGAWVDAVPNATPTALSFDQGFGAEWLVDAEVSYQATENIS
CEEEEEECCEEEEEEEECCCEEEHHCCCCCCCCEEEECCCCCCCEEEECCEEEEECCCEE
IAVGADNLLDAYPDKDRRQAQINNGIVYPQFSPFGFNGGFWYVRLTGKF
EEECCCHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCC
>Mature Secondary Structure 
GYRRSAARAALLASVSALGSGLILGLPAAASAQDAAAGQVDEVVVTGTRRAGVTLTESS
CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHCCCCCCEEEEECCCCCCEEEECCC
TPVDVVSGETLQRQGASDLNDALKTTVVSLNVQKFVAQDASAFVRPFSLRGLPPDQTLVL
CCEEEECCCHHHHCCCHHHHHHHHHEEEEEEHHHHHHHCHHHHHCCEECCCCCCCCEEEE
VNGKRRHRSAVVQITNQPLAAGAQGPDLSAIPAIAVDRIEVLRDGAAAQYGSDAIAGVIN
ECCCCCCCEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCHHHHHHH
FQLKRAREGVTAIARYGQFYEGDGEDYNLQLNVGLPLGEEGFFNVSGELSSSAKTSRGRQ
HHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCEEECCCCCCCHHHHCCCC
RPDAQALIDAGNTAVPDPAQRWGAPSVDAARLFFNAELPTSGTATAYAFGNFGQASAESD
CCCHHHHEECCCCCCCCHHHHCCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCC
FFYRPLNRADVFASVPLTNQPGGPRFSFTSRFPGGFAPVFRSNMLDMSLTGGVKGEAFGG
CEECCCCCCCEEEECCCCCCCCCCCEEECCCCCCCCHHHHHCCCEEEEECCCCCCCCCCC
LRYDLSAGLAQNEIEFKLDNTVNPSLGPDSPASFRAGELQQREARLNADFVYPVETGMFA
EEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCC
EPLNVAFGAEYRRETFEIKAGEPASYQAGRFASLTDPDTGRIIGLAVGSSGFPGYTPASA
CCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEECCCCCCCCEEEEEECCCCCCCCCCCCC
GAFSRSNWAAYVDLETEVVERLTVGAAARYEDFSDFGSTFNWKLTARYELFDGLALRGSV
CCCCCCCEEEEEEEHHHHHHHHHHCHHHCCCCHHHHCCEEEEEEEEEEEEECCEEEECCC
NTGFRAPTPGQSNISDVATNIDPLTGGLLLIATRPPTDPIAQYYGAKPLKEEESKNFAFG
CCCCCCCCCCCCCHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCCCCEEEH
AVLDVAGWVLTADYFNIEVKDRIALTSRIPITAADRAALAARGTPAGDLQSVRFFGNFFD
HHHHHHCEEEEEEEEEEEEECEEEEEECCCEEECCCHHHEECCCCCCCHHHHHHHHHHCC
TETEGLDVVLSRSWPLDIGRVGLTAAANYTRSKVTNLRDARAVDRERRIEIGRFNPRWRG
CCCCCEEEEEECCCCCCCCCCCEEHHCCHHHHHHHCCHHHHHHCHHHCEEEECCCCCCCC
NVTGTWESGRWNVLLRANYYGAWVDAVPNATPTALSFDQGFGAEWLVDAEVSYQATENIS
CEEEEEECCEEEEEEEECCCEEEHHCCCCCCCCEEEECCCCCCCEEEECCEEEEECCCEE
IAVGADNLLDAYPDKDRRQAQINNGIVYPQFSPFGFNGGFWYVRLTGKF
EEECCCHHHHCCCCCCHHHHHHCCCEEECCCCCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2644220; 9278503; 3316180; 1315732; 2160948 [H]