| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197104902
Identifier: 197104902
GI number: 197104902
Start: 1629506
End: 1630576
Strand: Reverse
Name: 197104902
Synonym: PHZ_c1437
Alternate gene names: NA
Gene position: 1630576-1629506 (Counterclockwise)
Preceding gene: 197104903
Following gene: 197104901
Centisome position: 40.8
GC content: 68.44
Gene sequence:
>1071_bases ATGTCCCGCTTCGAGCGGTTCCTGACCCTCTGGGTCGCGCTCTGCATCGTGGTCGGCATCGGCCTCGGCCACCTCTTCCC GAGCGTCTTCCAGGCGATCGGCGGGGCCGAGGTCGCCAAGGTCAACCTGCCGGTGGCGGTGCTCATCTGGCTGATGATCA TCCCGATGCTCATGAAGGTCGATTTCGGCGCCATGCGCCAAGTCGGCCAGCACTGGCGCGGCATCGGCGTGACCCTGTTC GTCAACTGGGCGGTGAAGCCGTTCTCGATGGCGGCGCTGGGCGCCTTCTTCATCGGCTACCTGTTCCGCCCTCACCTGCC CGCCGGCGAGATCAACAGCTACATCGCCGGCCTGATCCTGCTGGCTGCGGCGCCCTGTACGGCCATGGTGTTCGTCTGGA GCAACCTGACCCGCGGCGAGCCGCACTTCACGCTGAGCCAGGTGGCGGTGAACGACGCGATCATGGTCGTCGCATTCGCG CCCATCGTCGGGCTGCTGCTGGGCCTATCCGCCATCACCGTGCCCTGGGAGACCCTGCTGCTCTCCGTCGGGCTCTACAT CATCGTGCCCGTCGTCCTGGCGCAGCTGCTGAGGCGCGCGCTCCTCAAGCGCGGCGGCAAAGCCGAGCTCCAGCGCGTCC TGGCGCGCATCGGCCCCCTCTCCCTCACCGCCCTGCTCGCCACCCTGGTCCTGCTGTTCGGCTTCCAGGGCGAGCAGATC CTCACCCAGCCGGCGATCATCGCCATGCTGGCCGTGCCGATCCTGATCCAGGTCTACGCCAACTCGGCCATCGCCTATCT GCTGAACCGTGCGACGGGCGAAGCCCACTGCGTCGCGGGCCCGTCGGCGCTGATCGGCGCCAGCAACTTCTTCGAACTGG CCGTCGCCGCCGCCATCAGCCTGTTCGGCTTCAGCTCCGGTGCGGCGCTCGCGACCGTGGTCGGCGTGCTGATCGAGGTG CCGGTGATGCTGACCATCGTCGCCATCGTGAACCGGTCCAAGCGCTGGTACGAGCGGGGCGCGGCCGTTCAACGGGTGGC GGCGCGCTGCGCCCCGCCGATCACGAGGTGA
Upstream 100 bases:
>100_bases TGCAAGCCAAGCTGCGCGAGATCGGCCAGGCCGCCGACGAGACCCAGCCCGCCCAATGACGACGATCGAACCGCCCGCGC CGTCCGAAGGGCCCAAGGCC
Downstream 100 bases:
>100_bases GCTGCATGTCCGAATTCCCGATCACCATCTTCCACAACCCGGCTTGCGGCACCTCCCGCAACACCGTCGCCATGGTGCGG GCCGCCGGCTACGAGCCCGA
Product: arsenite efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MSRFERFLTLWVALCIVVGIGLGHLFPSVFQAIGGAEVAKVNLPVAVLIWLMIIPMLMKVDFGAMRQVGQHWRGIGVTLF VNWAVKPFSMAALGAFFIGYLFRPHLPAGEINSYIAGLILLAAAPCTAMVFVWSNLTRGEPHFTLSQVAVNDAIMVVAFA PIVGLLLGLSAITVPWETLLLSVGLYIIVPVVLAQLLRRALLKRGGKAELQRVLARIGPLSLTALLATLVLLFGFQGEQI LTQPAIIAMLAVPILIQVYANSAIAYLLNRATGEAHCVAGPSALIGASNFFELAVAAAISLFGFSSGAALATVVGVLIEV PVMLTIVAIVNRSKRWYERGAAVQRVAARCAPPITR
Sequences:
>Translated_356_residues MSRFERFLTLWVALCIVVGIGLGHLFPSVFQAIGGAEVAKVNLPVAVLIWLMIIPMLMKVDFGAMRQVGQHWRGIGVTLF VNWAVKPFSMAALGAFFIGYLFRPHLPAGEINSYIAGLILLAAAPCTAMVFVWSNLTRGEPHFTLSQVAVNDAIMVVAFA PIVGLLLGLSAITVPWETLLLSVGLYIIVPVVLAQLLRRALLKRGGKAELQRVLARIGPLSLTALLATLVLLFGFQGEQI LTQPAIIAMLAVPILIQVYANSAIAYLLNRATGEAHCVAGPSALIGASNFFELAVAAAISLFGFSSGAALATVVGVLIEV PVMLTIVAIVNRSKRWYERGAAVQRVAARCAPPITR >Mature_355_residues SRFERFLTLWVALCIVVGIGLGHLFPSVFQAIGGAEVAKVNLPVAVLIWLMIIPMLMKVDFGAMRQVGQHWRGIGVTLFV NWAVKPFSMAALGAFFIGYLFRPHLPAGEINSYIAGLILLAAAPCTAMVFVWSNLTRGEPHFTLSQVAVNDAIMVVAFAP IVGLLLGLSAITVPWETLLLSVGLYIIVPVVLAQLLRRALLKRGGKAELQRVLARIGPLSLTALLATLVLLFGFQGEQIL TQPAIIAMLAVPILIQVYANSAIAYLLNRATGEAHCVAGPSALIGASNFFELAVAAAISLFGFSSGAALATVVGVLIEVP VMLTIVAIVNRSKRWYERGAAVQRVAARCAPPITR
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=345, Percent_Identity=26.0869565217391, Blast_Score=94, Evalue=5e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 38029; Mature: 37898
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRFERFLTLWVALCIVVGIGLGHLFPSVFQAIGGAEVAKVNLPVAVLIWLMIIPMLMKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHC DFGAMRQVGQHWRGIGVTLFVNWAVKPFSMAALGAFFIGYLFRPHLPAGEINSYIAGLIL CHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LAAAPCTAMVFVWSNLTRGEPHFTLSQVAVNDAIMVVAFAPIVGLLLGLSAITVPWETLL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVGLYIIVPVVLAQLLRRALLKRGGKAELQRVLARIGPLSLTALLATLVLLFGFQGEQI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH LTQPAIIAMLAVPILIQVYANSAIAYLLNRATGEAHCVAGPSALIGASNFFELAVAAAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHHHHHHH LFGFSSGAALATVVGVLIEVPVMLTIVAIVNRSKRWYERGAAVQRVAARCAPPITR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SRFERFLTLWVALCIVVGIGLGHLFPSVFQAIGGAEVAKVNLPVAVLIWLMIIPMLMKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHC DFGAMRQVGQHWRGIGVTLFVNWAVKPFSMAALGAFFIGYLFRPHLPAGEINSYIAGLIL CHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH LAAAPCTAMVFVWSNLTRGEPHFTLSQVAVNDAIMVVAFAPIVGLLLGLSAITVPWETLL HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVGLYIIVPVVLAQLLRRALLKRGGKAELQRVLARIGPLSLTALLATLVLLFGFQGEQI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHH LTQPAIIAMLAVPILIQVYANSAIAYLLNRATGEAHCVAGPSALIGASNFFELAVAAAIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHHHHHHH LFGFSSGAALATVVGVLIEVPVMLTIVAIVNRSKRWYERGAAVQRVAARCAPPITR HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]