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The map label for this gene is ytfM [H]

Identifier: 197104873

GI number: 197104873

Start: 1591608

End: 1593551

Strand: Direct

Name: ytfM [H]

Synonym: PHZ_c1407

Alternate gene names: 197104873

Gene position: 1591608-1593551 (Clockwise)

Preceding gene: 197104870

Following gene: 197104874

Centisome position: 39.83

GC content: 73.2

Gene sequence:

>1944_bases
ATGGGTATAGTGCCGCTACGGCGGCGCTTGTTTACTTTCATCGACCTGTTGCGATGCCGCCGAGCCCCGTCACGATTCGC
CTTTGATGGACTCGCTCGCCCTGCACGTGACAGGCGCCGGCCGCGCCGCTACAGGGAAGGGGGGGCTCGCGGGGAATCGA
GCTTGGGTCGACTGATCTATGCCGTCGCCGCTGCGGCGGCCCTGTGCGTCCAGGGACTGGGCGCGGAAGCCCGGGCCGAG
CCGCGTGCGCGCGTCGAGGGCGAGCTCGGCGACGACCTGCGTGATGCGATCCAGCGCGCGATCGGCGACATCGACGATCC
CATCGAGACCCGCTTCGAGGCCCGCCGCCGCGCCCGCGCCGCGGCCGAGGACGCCATCGCCGTTCTGCGGTCCGAAGGCT
ACTACGCCTATTCCGTCGAACCGGACGTCAGCGAGAGCGATCCGCCGGTCCCGCTGGTCCGCATCCAGCCGGGGCCGCGT
TTCACGCTGGGCGAAGCGGCCATCGACTGGCAGGGCGAGGCGCCTGACGAGCCCAGCCAGGCCGCGGCCCGGGACGCCGT
TGACCTGGAGCCGGGCGCCCCCGGTCGGGCGGCCGAGGTCGTGGCCGCGGAGGGCCGGATCGTCGCCACCCTCCAGGGCC
GCGGCTACGCCGACGCCTCGCCCCGGCCGCGCGAGGTGATCGTCGACCACGCCGACGACAGCCTGACCCCCACCTATCGG
ATCGCCGCCGGGCGGCTGGTCCGCCTCAACGGGGTCGAGCTGCGCACCGACGGCCGGACCCGGCCCGCCTGGGTGGACGG
GCTAGCGCCCTGGACCCCGGGCGAGCGCTACAGCCCGGACAGCGTGGGGGAGCTGGAGCGGCGGCTGCTGGACACCGGCG
TCTACGATTCCGTCACCGTCGCGCTGGCGCCGGCCGAGCGGGAGACCGCCGAAGGCCTGCGGCCGGTGGTGGTGAGCCTC
GCCGAACGCAAGCGGCGGTCGATCGAGGCGGGGGCGAGCTATTCCACCACGGACGGCGCGGGCGTCGACGTCCGCTGGAC
CCGCTACAACGTGCTTGGCCGCGCCGACACCCTGGCGGTTCTGGGCCGCCTGTCCGAGCAGGACAGCCGGGTCGGCGTGG
ACCTGACGCTGCCCCACTGGCGGCGGGCGCAGCAGACGCTGGTGCTGGGCGCGGCCGCCTACGACGTCTCGACCGACGCC
TATGACGAGACCGGCTTCGGCGTGCGGACCGACGTCACCCGCAGATACGGCAAGACGTCGTATCTCACCGTCGGCGGGAC
TCTGGACGCCAGCCGCACCAAGGATCGCCGTCCCGAGGACCTCTCCAGCCTCGGCCGCGACATCGTTACGGCGTCCGTTC
TCGGCGAAGTGCTGCTGGACCGCTCGAACGATCCCCTCGATCCGCGCCGCGGCTGGCGGGTGGCCGCCCGGGCCGAGCCC
ACCGTCCTGCTGGGCGAGGAGAACCTGCCGTACGTGCGCGTGCAGGTGCAGGGAACGGGCTATCTGCCGCTGGACGACCA
GGCGCGCACGGTGCTGGCGGGACGGCTGCGGGTCGGGCGGATCCTGAACGGAAGCATCCCCGAGGTGCCGGCCTCCCGCC
GCTTCTTCGCCGGCGGCGGCGGCTCGGTGCGCGGCTTCCCCTACCAGGCCGTGGGTCCCAGGCTCGCCGACAACACGCCG
AAGGGCGGGCTCTCGCTGTTCGAGGCCTCGGCCGAGGTGCGCCGCGACCTGACCGAGCGTTGGGGCGTGGCGCTATTCGT
CGACGCCGGCTCGGTCGGCTCCAGCGGGGCCGTGGACCTGGGCGACCTGGCGGTCGGGGCAGGCTTCGGCGTGCGATACA
ACCTCGGCTTCGCGCCGATCCGGGTGGACATCGCCACGCCCGTCTCCAACCGGCGGGGCGAGGCGGCCTTCCAGATCTAC
CTCAGCATTGGGCAGAGCTTTTGA

Upstream 100 bases:

>100_bases
CGATACTGTTGTGAAGCTTTCAGGTTATTGTCGATAAGTCGACGGGGCTGCGGCGGCCGGTCGCAGCCGTCGAGTAAAGC
CACATTTTGGACGTGGATGC

Downstream 100 bases:

>100_bases
GCGAGCCCGAAGACACCCCGCCGGTCCCGGCCGCGCTGAAGCGCTCGGCGCTTCCGAAGACGATCGTCGCGATCGCCGTC
GTCGTGCTGGTCGTGCTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 647; Mature: 646

Protein sequence:

>647_residues
MGIVPLRRRLFTFIDLLRCRRAPSRFAFDGLARPARDRRRPRRYREGGARGESSLGRLIYAVAAAAALCVQGLGAEARAE
PRARVEGELGDDLRDAIQRAIGDIDDPIETRFEARRRARAAAEDAIAVLRSEGYYAYSVEPDVSESDPPVPLVRIQPGPR
FTLGEAAIDWQGEAPDEPSQAAARDAVDLEPGAPGRAAEVVAAEGRIVATLQGRGYADASPRPREVIVDHADDSLTPTYR
IAAGRLVRLNGVELRTDGRTRPAWVDGLAPWTPGERYSPDSVGELERRLLDTGVYDSVTVALAPAERETAEGLRPVVVSL
AERKRRSIEAGASYSTTDGAGVDVRWTRYNVLGRADTLAVLGRLSEQDSRVGVDLTLPHWRRAQQTLVLGAAAYDVSTDA
YDETGFGVRTDVTRRYGKTSYLTVGGTLDASRTKDRRPEDLSSLGRDIVTASVLGEVLLDRSNDPLDPRRGWRVAARAEP
TVLLGEENLPYVRVQVQGTGYLPLDDQARTVLAGRLRVGRILNGSIPEVPASRRFFAGGGGSVRGFPYQAVGPRLADNTP
KGGLSLFEASAEVRRDLTERWGVALFVDAGSVGSSGAVDLGDLAVGAGFGVRYNLGFAPIRVDIATPVSNRRGEAAFQIY
LSIGQSF

Sequences:

>Translated_647_residues
MGIVPLRRRLFTFIDLLRCRRAPSRFAFDGLARPARDRRRPRRYREGGARGESSLGRLIYAVAAAAALCVQGLGAEARAE
PRARVEGELGDDLRDAIQRAIGDIDDPIETRFEARRRARAAAEDAIAVLRSEGYYAYSVEPDVSESDPPVPLVRIQPGPR
FTLGEAAIDWQGEAPDEPSQAAARDAVDLEPGAPGRAAEVVAAEGRIVATLQGRGYADASPRPREVIVDHADDSLTPTYR
IAAGRLVRLNGVELRTDGRTRPAWVDGLAPWTPGERYSPDSVGELERRLLDTGVYDSVTVALAPAERETAEGLRPVVVSL
AERKRRSIEAGASYSTTDGAGVDVRWTRYNVLGRADTLAVLGRLSEQDSRVGVDLTLPHWRRAQQTLVLGAAAYDVSTDA
YDETGFGVRTDVTRRYGKTSYLTVGGTLDASRTKDRRPEDLSSLGRDIVTASVLGEVLLDRSNDPLDPRRGWRVAARAEP
TVLLGEENLPYVRVQVQGTGYLPLDDQARTVLAGRLRVGRILNGSIPEVPASRRFFAGGGGSVRGFPYQAVGPRLADNTP
KGGLSLFEASAEVRRDLTERWGVALFVDAGSVGSSGAVDLGDLAVGAGFGVRYNLGFAPIRVDIATPVSNRRGEAAFQIY
LSIGQSF
>Mature_646_residues
GIVPLRRRLFTFIDLLRCRRAPSRFAFDGLARPARDRRRPRRYREGGARGESSLGRLIYAVAAAAALCVQGLGAEARAEP
RARVEGELGDDLRDAIQRAIGDIDDPIETRFEARRRARAAAEDAIAVLRSEGYYAYSVEPDVSESDPPVPLVRIQPGPRF
TLGEAAIDWQGEAPDEPSQAAARDAVDLEPGAPGRAAEVVAAEGRIVATLQGRGYADASPRPREVIVDHADDSLTPTYRI
AAGRLVRLNGVELRTDGRTRPAWVDGLAPWTPGERYSPDSVGELERRLLDTGVYDSVTVALAPAERETAEGLRPVVVSLA
ERKRRSIEAGASYSTTDGAGVDVRWTRYNVLGRADTLAVLGRLSEQDSRVGVDLTLPHWRRAQQTLVLGAAAYDVSTDAY
DETGFGVRTDVTRRYGKTSYLTVGGTLDASRTKDRRPEDLSSLGRDIVTASVLGEVLLDRSNDPLDPRRGWRVAARAEPT
VLLGEENLPYVRVQVQGTGYLPLDDQARTVLAGRLRVGRILNGSIPEVPASRRFFAGGGGSVRGFPYQAVGPRLADNTPK
GGLSLFEASAEVRRDLTERWGVALFVDAGSVGSSGAVDLGDLAVGAGFGVRYNLGFAPIRVDIATPVSNRRGEAAFQIYL
SIGQSF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0698 [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=605, Percent_Identity=24.6280991735537, Blast_Score=122, Evalue=7e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 69949; Mature: 69818

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIVPLRRRLFTFIDLLRCRRAPSRFAFDGLARPARDRRRPRRYREGGARGESSLGRLIY
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AVAAAAALCVQGLGAEARAEPRARVEGELGDDLRDAIQRAIGDIDDPIETRFEARRRARA
HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AAEDAIAVLRSEGYYAYSVEPDVSESDPPVPLVRIQPGPRFTLGEAAIDWQGEAPDEPSQ
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEECCEEEECCCCCCCCHHH
AAARDAVDLEPGAPGRAAEVVAAEGRIVATLQGRGYADASPRPREVIVDHADDSLTPTYR
HHHCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEE
IAAGRLVRLNGVELRTDGRTRPAWVDGLAPWTPGERYSPDSVGELERRLLDTGVYDSVTV
ECCCCEEEECCEEEEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
ALAPAERETAEGLRPVVVSLAERKRRSIEAGASYSTTDGAGVDVRWTRYNVLGRADTLAV
EEECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHH
LGRLSEQDSRVGVDLTLPHWRRAQQTLVLGAAAYDVSTDAYDETGFGVRTDVTRRYGKTS
HHHHCCCCCCCEEEEECCCHHHCCCEEEEEEEEEECCCCCCCCCCCCEEHHHHHHCCCCE
YLTVGGTLDASRTKDRRPEDLSSLGRDIVTASVLGEVLLDRSNDPLDPRRGWRVAARAEP
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
TVLLGEENLPYVRVQVQGTGYLPLDDQARTVLAGRLRVGRILNGSIPEVPASRRFFAGGG
EEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCC
GSVRGFPYQAVGPRLADNTPKGGLSLFEASAEVRRDLTERWGVALFVDAGSVGSSGAVDL
CCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
GDLAVGAGFGVRYNLGFAPIRVDIATPVSNRRGEAAFQIYLSIGQSF
CCEEECCCCCEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCC
>Mature Secondary Structure 
GIVPLRRRLFTFIDLLRCRRAPSRFAFDGLARPARDRRRPRRYREGGARGESSLGRLIY
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
AVAAAAALCVQGLGAEARAEPRARVEGELGDDLRDAIQRAIGDIDDPIETRFEARRRARA
HHHHHHHHHHHCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AAEDAIAVLRSEGYYAYSVEPDVSESDPPVPLVRIQPGPRFTLGEAAIDWQGEAPDEPSQ
HHHHHHHHHHCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEECCEEEECCCCCCCCHHH
AAARDAVDLEPGAPGRAAEVVAAEGRIVATLQGRGYADASPRPREVIVDHADDSLTPTYR
HHHCCCCCCCCCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCEEE
IAAGRLVRLNGVELRTDGRTRPAWVDGLAPWTPGERYSPDSVGELERRLLDTGVYDSVTV
ECCCCEEEECCEEEEECCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEE
ALAPAERETAEGLRPVVVSLAERKRRSIEAGASYSTTDGAGVDVRWTRYNVLGRADTLAV
EEECCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCHHHHHH
LGRLSEQDSRVGVDLTLPHWRRAQQTLVLGAAAYDVSTDAYDETGFGVRTDVTRRYGKTS
HHHHCCCCCCCEEEEECCCHHHCCCEEEEEEEEEECCCCCCCCCCCCEEHHHHHHCCCCE
YLTVGGTLDASRTKDRRPEDLSSLGRDIVTASVLGEVLLDRSNDPLDPRRGWRVAARAEP
EEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCC
TVLLGEENLPYVRVQVQGTGYLPLDDQARTVLAGRLRVGRILNGSIPEVPASRRFFAGGG
EEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCHHHCCCCCCCCCCCEEEECCC
GSVRGFPYQAVGPRLADNTPKGGLSLFEASAEVRRDLTERWGVALFVDAGSVGSSGAVDL
CCCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCC
GDLAVGAGFGVRYNLGFAPIRVDIATPVSNRRGEAAFQIYLSIGQSF
CCEEECCCCCEEEECCCEEEEEEEECCCCCCCCCEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]