| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is coaD [H]
Identifier: 197104863
GI number: 197104863
Start: 1582048
End: 1582542
Strand: Direct
Name: coaD [H]
Synonym: PHZ_c1397
Alternate gene names: 197104863
Gene position: 1582048-1582542 (Clockwise)
Preceding gene: 197104862
Following gene: 197104864
Centisome position: 39.59
GC content: 67.47
Gene sequence:
>495_bases ATGACCCGCGTCGGCCTCTATCCGGGCACCTTCGATCCGATCCACAACGGCCACACCGACATCATCGGTCGGGCCGCCAA GCTGGTGGACAAGCTGGTGCTGGGCGTCGCCATCAACGCCGGCAAGGGCCCGCTCTTCTCGCTGGAGGAGCGGGTGGCGA TCGTCGAGGAGGCCATTGCGCCGCTGCGCGACCGCGTCGAGATCGTGGTCCAGCCGTTCGAGGGGCTGACCATGCACTTC GCCCGGGAGGTTGGGGCCAGCGTCATCGTCCGCGGTCTGCGGGCCGTCGCCGACTTCGAGTTCGAGTTCCAGATGACGGC CATGAACCAGCAGCTCGACCGGCAGATCGAGACTGTTTTCTTCATGGCCGACCCGCGCCACCAGGCCATCGCCTCCAAGC TGGTCAAGGAGATCGCGATCCTGGGCGGGGAGATCCACAAGTTCGTGAGCCCGGCCGTCGAGGCCCGCCTGCTGGCCAAG GTCGGCCGCGCCTGA
Upstream 100 bases:
>100_bases CAACGGGGGCGACGTGGCGTAAGGCAGCCAACTTTCGCTTGCCAGGCGCCCGGTCGGCGGGCCAAAGGCGAAACCCGTGA GTTGGGGGGACCTGAGCCTT
Downstream 100 bases:
>100_bases TCGCTGCTCCTGATCGCGCTCTGGCCCGAGCGGGGCGGCGCCTGTACGAGTGACCCGATGAACCTCAAGACCGTCCTGAT CGCCGCGGGTCTCGCGGCGT
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTRVGLYPGTFDPIHNGHTDIIGRAAKLVDKLVLGVAINAGKGPLFSLEERVAIVEEAIAPLRDRVEIVVQPFEGLTMHF AREVGASVIVRGLRAVADFEFEFQMTAMNQQLDRQIETVFFMADPRHQAIASKLVKEIAILGGEIHKFVSPAVEARLLAK VGRA
Sequences:
>Translated_164_residues MTRVGLYPGTFDPIHNGHTDIIGRAAKLVDKLVLGVAINAGKGPLFSLEERVAIVEEAIAPLRDRVEIVVQPFEGLTMHF AREVGASVIVRGLRAVADFEFEFQMTAMNQQLDRQIETVFFMADPRHQAIASKLVKEIAILGGEIHKFVSPAVEARLLAK VGRA >Mature_163_residues TRVGLYPGTFDPIHNGHTDIIGRAAKLVDKLVLGVAINAGKGPLFSLEERVAIVEEAIAPLRDRVEIVVQPFEGLTMHFA REVGASVIVRGLRAVADFEFEFQMTAMNQQLDRQIETVFFMADPRHQAIASKLVKEIAILGGEIHKFVSPAVEARLLAKV GRA
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=162, Percent_Identity=45.0617283950617, Blast_Score=142, Evalue=1e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 17999; Mature: 17868
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRVGLYPGTFDPIHNGHTDIIGRAAKLVDKLVLGVAINAGKGPLFSLEERVAIVEEAIA CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH PLRDRVEIVVQPFEGLTMHFAREVGASVIVRGLRAVADFEFEFQMTAMNQQLDRQIETVF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHE FMADPRHQAIASKLVKEIAILGGEIHKFVSPAVEARLLAKVGRA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TRVGLYPGTFDPIHNGHTDIIGRAAKLVDKLVLGVAINAGKGPLFSLEERVAIVEEAIA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHH PLRDRVEIVVQPFEGLTMHFAREVGASVIVRGLRAVADFEFEFQMTAMNQQLDRQIETVF HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHHHE FMADPRHQAIASKLVKEIAILGGEIHKFVSPAVEARLLAKVGRA EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA