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The map label for this gene is bepC [H]

Identifier: 197104808

GI number: 197104808

Start: 1520766

End: 1522304

Strand: Direct

Name: bepC [H]

Synonym: PHZ_c1342

Alternate gene names: 197104808

Gene position: 1520766-1522304 (Clockwise)

Preceding gene: 197104807

Following gene: 197104809

Centisome position: 38.05

GC content: 73.36

Gene sequence:

>1539_bases
ATGTCGAAGAGTCCGCGCGGCCGCCTCCTGGCCGCGGTCTTCAGCGTGGGGCTCGCCGCCGCCTTCGCGGGCCCGGCCGC
CGCCGAGACCCTGGCCGACGCCATCGCGCTGGCCTACGAGACCAACCCCACGCTGCAGGCCCAGAGGGCGACCCAGCGGG
CGCTCGACGAGAGCTTCGTCCAGGCCCGCACCGGCTGGCGCCCGACGCTGAACCTCAACGGCTCGGTCCGATACCTCGAG
GACCGCTCGCCGCGGGCCATCATCAACCCGGCCCAGCGCACCACCATCGAAGAGGGCAACAGCGCCAGCGTCGGCCTGAC
CTTCAACCAACCCCTGTGGACCGGCGGCCGGGTCGCCGCGGCCGTGTCCGCGGCCCAGGCCGAGGTGCTGGCCGGCCGCG
AGAACCTGCGGCGCATCGAGGCCCAGATCCTGGCCACCGTCATCCAGGCCTACGCCGACGTCCGGCGGGACCAGGAGGCA
CTGCGCATCCGCCAGGAGAACGTCCGCGTCCTGACCCGCCAGCTGGAGGAGTCCCAGGCCCGCTTCGACGTGGGCGAGGT
GACCCGCACCGACGTCGCCCAGTCGGAAGCCCGCCTGGCCCAGGCGCAGGCCCTGTTCAGCGAGTCCGAGGCCCAGCTGG
CCATCAGCCGCGCCAACTACGCCCAGGTGGTCGGCCAGAATCCCGGCGAGCTCGCGCCCGAGCCGTCGCTGGCGCACATG
CTGCCGACCGATCCCGATCAGGCCTACACGGTGGCCGAGGAGAACAACCCGCAGCTCCGCGCCCAGCAGTTCGCCGAGCA
GGCCAGCCGCGCGCGCATCGCCGGCGCCCGCGCCGAGCGGATGCCGAACGTCAGCGCCCAGGCGACCATGGCCTTTGGCG
GCCCGGCGCGGCCCCAGCCGCCGAACGATCCGTTCGAGCGCGGCCTCTTCAACCGCGAGAGCACGGCGACGGTGAACGTG
ACCGTGCCGCTGTTCTCGGGCGGCCTCGTCTCCTCGCGCGTGCGCCAGGCCGTCGAGCGCAACAACTCCGACCGGCTGAC
CACCGAGGCCGTGCGCCGCAGCGTGCTCCAGAACATCACCTCGTTCTGGAGCCAGCTGATCGCCGCCCGGGCCAACATCG
CTTCCAGCGAGCAGCAGGTCCGCGCCGCCACCATCGCCGCCGAAGGCACCCGCCAGGAGCAGCAGGTGGGCCTTCGCACC
ACCATCGATGTGCTGAACGCCGAGCAGGAGCTGCGCCAGGCGCAGCTGAACCAGGTCTTCGCGCGCCGCGACGAATACGT
CTCGGCCGCCGGCGTGCTCTCGACCATGGGCCGGCTCGAGGCCCGCAACCTCGTTCCGACGGCGCCGCAGTACGATCCGG
CCAAGAACTTCCGGAAGCTGCGCGTCACCTGGGGCTGGGTGCCGTGGGAGGAGCCGATCGGCATCGTCGACCGCGTCCTG
ACGCCCTGGCCGGCGCCGACGCCCGACCCGAAGCCGGTCGAGGCGGCGATTCCCCCCGGGCTGACCCCGCCGCCGGCGAA
CGCGGCGGCGCCCCGCTGA

Upstream 100 bases:

>100_bases
GAAACCGGGCCGTGAAAAAAGCTTAAGGTGACGCCGCTTGGTCCTGCGGGCACAGGACGCATATAGAACACGACGTCTCT
CGCACGATCGGGGATTACGA

Downstream 100 bases:

>100_bases
CTCTCCGCTGACCCTCCGGTGGTTCCCCCTGGAGGGGAACGGAGGGCGGCTGTGCGTGCGGAAATTGCAGGAACGTCGCC
GCGCGCTTAGGCTCGGGCGA

Product: type I secretion outer membrane protein, TolC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 511

Protein sequence:

>512_residues
MSKSPRGRLLAAVFSVGLAAAFAGPAAAETLADAIALAYETNPTLQAQRATQRALDESFVQARTGWRPTLNLNGSVRYLE
DRSPRAIINPAQRTTIEEGNSASVGLTFNQPLWTGGRVAAAVSAAQAEVLAGRENLRRIEAQILATVIQAYADVRRDQEA
LRIRQENVRVLTRQLEESQARFDVGEVTRTDVAQSEARLAQAQALFSESEAQLAISRANYAQVVGQNPGELAPEPSLAHM
LPTDPDQAYTVAEENNPQLRAQQFAEQASRARIAGARAERMPNVSAQATMAFGGPARPQPPNDPFERGLFNRESTATVNV
TVPLFSGGLVSSRVRQAVERNNSDRLTTEAVRRSVLQNITSFWSQLIAARANIASSEQQVRAATIAAEGTRQEQQVGLRT
TIDVLNAEQELRQAQLNQVFARRDEYVSAAGVLSTMGRLEARNLVPTAPQYDPAKNFRKLRVTWGWVPWEEPIGIVDRVL
TPWPAPTPDPKPVEAAIPPGLTPPPANAAAPR

Sequences:

>Translated_512_residues
MSKSPRGRLLAAVFSVGLAAAFAGPAAAETLADAIALAYETNPTLQAQRATQRALDESFVQARTGWRPTLNLNGSVRYLE
DRSPRAIINPAQRTTIEEGNSASVGLTFNQPLWTGGRVAAAVSAAQAEVLAGRENLRRIEAQILATVIQAYADVRRDQEA
LRIRQENVRVLTRQLEESQARFDVGEVTRTDVAQSEARLAQAQALFSESEAQLAISRANYAQVVGQNPGELAPEPSLAHM
LPTDPDQAYTVAEENNPQLRAQQFAEQASRARIAGARAERMPNVSAQATMAFGGPARPQPPNDPFERGLFNRESTATVNV
TVPLFSGGLVSSRVRQAVERNNSDRLTTEAVRRSVLQNITSFWSQLIAARANIASSEQQVRAATIAAEGTRQEQQVGLRT
TIDVLNAEQELRQAQLNQVFARRDEYVSAAGVLSTMGRLEARNLVPTAPQYDPAKNFRKLRVTWGWVPWEEPIGIVDRVL
TPWPAPTPDPKPVEAAIPPGLTPPPANAAAPR
>Mature_511_residues
SKSPRGRLLAAVFSVGLAAAFAGPAAAETLADAIALAYETNPTLQAQRATQRALDESFVQARTGWRPTLNLNGSVRYLED
RSPRAIINPAQRTTIEEGNSASVGLTFNQPLWTGGRVAAAVSAAQAEVLAGRENLRRIEAQILATVIQAYADVRRDQEAL
RIRQENVRVLTRQLEESQARFDVGEVTRTDVAQSEARLAQAQALFSESEAQLAISRANYAQVVGQNPGELAPEPSLAHML
PTDPDQAYTVAEENNPQLRAQQFAEQASRARIAGARAERMPNVSAQATMAFGGPARPQPPNDPFERGLFNRESTATVNVT
VPLFSGGLVSSRVRQAVERNNSDRLTTEAVRRSVLQNITSFWSQLIAARANIASSEQQVRAATIAAEGTRQEQQVGLRTT
IDVLNAEQELRQAQLNQVFARRDEYVSAAGVLSTMGRLEARNLVPTAPQYDPAKNFRKLRVTWGWVPWEEPIGIVDRVLT
PWPAPTPDPKPVEAAIPPGLTPPPANAAAPR

Specific function: Involved in the efflux of toxic and relatively hydrophobic compounds. Influences survival inside the host [H]

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cell outer membrane (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the outer membrane factor (OMF) (TC 1.B.17) family [H]

Homologues:

Organism=Escherichia coli, GI87082199, Length=431, Percent_Identity=23.4338747099768, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003423
- InterPro:   IPR010130 [H]

Pfam domain/function: PF02321 OEP [H]

EC number: NA

Molecular weight: Translated: 55645; Mature: 55514

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSPRGRLLAAVFSVGLAAAFAGPAAAETLADAIALAYETNPTLQAQRATQRALDESFV
CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QARTGWRPTLNLNGSVRYLEDRSPRAIINPAQRTTIEEGNSASVGLTFNQPLWTGGRVAA
HHHCCCCCEEECCCCEEEECCCCCCCEECCHHHHHHCCCCCCEEEEEECCCCCCCCHHHH
AVSAAQAEVLAGRENLRRIEAQILATVIQAYADVRRDQEALRIRQENVRVLTRQLEESQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RFDVGEVTRTDVAQSEARLAQAQALFSESEAQLAISRANYAQVVGQNPGELAPEPSLAHM
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCC
LPTDPDQAYTVAEENNPQLRAQQFAEQASRARIAGARAERMPNVSAQATMAFGGPARPQP
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PNDPFERGLFNRESTATVNVTVPLFSGGLVSSRVRQAVERNNSDRLTTEAVRRSVLQNIT
CCCHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SFWSQLIAARANIASSEQQVRAATIAAEGTRQEQQVGLRTTIDVLNAEQELRQAQLNQVF
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHH
ARRDEYVSAAGVLSTMGRLEARNLVPTAPQYDPAKNFRKLRVTWGWVPWEEPIGIVDRVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCHHHHHHHC
TPWPAPTPDPKPVEAAIPPGLTPPPANAAAPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKSPRGRLLAAVFSVGLAAAFAGPAAAETLADAIALAYETNPTLQAQRATQRALDESFV
CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
QARTGWRPTLNLNGSVRYLEDRSPRAIINPAQRTTIEEGNSASVGLTFNQPLWTGGRVAA
HHHCCCCCEEECCCCEEEECCCCCCCEECCHHHHHHCCCCCCEEEEEECCCCCCCCHHHH
AVSAAQAEVLAGRENLRRIEAQILATVIQAYADVRRDQEALRIRQENVRVLTRQLEESQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
RFDVGEVTRTDVAQSEARLAQAQALFSESEAQLAISRANYAQVVGQNPGELAPEPSLAHM
HCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEHHHHHHHHHHCCCCCCCCCCCCCCCC
LPTDPDQAYTVAEENNPQLRAQQFAEQASRARIAGARAERMPNVSAQATMAFGGPARPQP
CCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCC
PNDPFERGLFNRESTATVNVTVPLFSGGLVSSRVRQAVERNNSDRLTTEAVRRSVLQNIT
CCCHHHHCCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
SFWSQLIAARANIASSEQQVRAATIAAEGTRQEQQVGLRTTIDVLNAEQELRQAQLNQVF
HHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHCHHHHHHHHHHHHHH
ARRDEYVSAAGVLSTMGRLEARNLVPTAPQYDPAKNFRKLRVTWGWVPWEEPIGIVDRVL
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCEEEEEEECCCCCCCCHHHHHHHC
TPWPAPTPDPKPVEAAIPPGLTPPPANAAAPR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]