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The map label for this gene is ectD [H]

Identifier: 197104804

GI number: 197104804

Start: 1516077

End: 1517000

Strand: Direct

Name: ectD [H]

Synonym: PHZ_c1338

Alternate gene names: 197104804

Gene position: 1516077-1517000 (Clockwise)

Preceding gene: 197104803

Following gene: 197104805

Centisome position: 37.94

GC content: 69.26

Gene sequence:

>924_bases
ATGACGGAAGATCTCTATCCCTCCCGCGTGGCCTCGAAGCCTGCCTGGCAGCCGCGCATCGACCCGGTGGCCCACAGCCG
CTGGACCCCTGAGGCGCCGATCTCGGCCGAACAGCACGTGATGTTCGAGCGCGACGGCTATCTCGTGCTCGAGAACCTGT
TCTCGGCCGCCGAGGTGGCCACGCTACAGCGCGAACTGGAGCGGATGCGCAAGATGCCGGCCTCGCTGGAGACCGAGACG
CTGATCGCCGAGCCCGGCTCGGGCGCGCTGCGCTCTGTCTTCGCGATCCACGCCCAGAACCGGCTGTTCGGCCGGCTGGC
CGCCGACGAGCGGCTGGTGTCGGTCGCTCGCCACCTGCTGGGCGACGAGGTCTACATCCACCAGTCGCGGCTGAACTACA
AAAGCGGCTTCGACGGCAGGGAATTCTACTGGCACTCGGATTTCGAGACCTGGCACGTCGAGGACGGGATGCCCCGCATG
CGGGCGCTGTCGATGTCGGTCCAGCTCGCCGACAACCACGCCGTCAACGGCCCGCTGATGGTGATGCCGGGCTCGCAGCG
GACGTACGTCTCGTGCGTCGGCGAGACGCCCGAGGACCACTACAAGCAGTCGCTGCGCAAGCAGGAGTACGGCGTGCCGG
ATCGCGACAGCCTGGCCCGCCTGGCCGAGACCTGCGGGATCGTCGCCCCCACCGGGCCGGCCGGCTCGGTCGTCCTGTTC
GACTGCAACACCATGCACGGCTCGAACGGCAACATCACCCCGTTCCCGCGGGCCAACGCCTTCATCGTCTACAACTCGGT
CTCCAACCGTCTGGTGGAGCCGTTCGGCGGGCGCGCCCCGCGGCCCGAGTTCATCGCCACCCGCGAGGGCTTCGAGCCGC
TCACGGCGATGGGCGGCGACCTCGCCGAGGGGAGGGCGGCCTGA

Upstream 100 bases:

>100_bases
GTCATGGCCTGCGCCTTCAACCCGCCGGTGACCGGCCGCGAGGTGCACGACGAGACCGGCGCCTATCCCCTCGAAGCGGA
GATGGCCTGAGGCCGCAGCG

Downstream 100 bases:

>100_bases
TGGGCGTGCATACCGTCGAGAAGATCGGCGGCACCTCCATCTCGGACACGCGCGCGGTCCTGGACAACATCCTGATCGGC
GCGCGGACGGGGGCCGAGCT

Product: phytanoyl-CoA dioxygenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 307; Mature: 306

Protein sequence:

>307_residues
MTEDLYPSRVASKPAWQPRIDPVAHSRWTPEAPISAEQHVMFERDGYLVLENLFSAAEVATLQRELERMRKMPASLETET
LIAEPGSGALRSVFAIHAQNRLFGRLAADERLVSVARHLLGDEVYIHQSRLNYKSGFDGREFYWHSDFETWHVEDGMPRM
RALSMSVQLADNHAVNGPLMVMPGSQRTYVSCVGETPEDHYKQSLRKQEYGVPDRDSLARLAETCGIVAPTGPAGSVVLF
DCNTMHGSNGNITPFPRANAFIVYNSVSNRLVEPFGGRAPRPEFIATREGFEPLTAMGGDLAEGRAA

Sequences:

>Translated_307_residues
MTEDLYPSRVASKPAWQPRIDPVAHSRWTPEAPISAEQHVMFERDGYLVLENLFSAAEVATLQRELERMRKMPASLETET
LIAEPGSGALRSVFAIHAQNRLFGRLAADERLVSVARHLLGDEVYIHQSRLNYKSGFDGREFYWHSDFETWHVEDGMPRM
RALSMSVQLADNHAVNGPLMVMPGSQRTYVSCVGETPEDHYKQSLRKQEYGVPDRDSLARLAETCGIVAPTGPAGSVVLF
DCNTMHGSNGNITPFPRANAFIVYNSVSNRLVEPFGGRAPRPEFIATREGFEPLTAMGGDLAEGRAA
>Mature_306_residues
TEDLYPSRVASKPAWQPRIDPVAHSRWTPEAPISAEQHVMFERDGYLVLENLFSAAEVATLQRELERMRKMPASLETETL
IAEPGSGALRSVFAIHAQNRLFGRLAADERLVSVARHLLGDEVYIHQSRLNYKSGFDGREFYWHSDFETWHVEDGMPRMR
ALSMSVQLADNHAVNGPLMVMPGSQRTYVSCVGETPEDHYKQSLRKQEYGVPDRDSLARLAETCGIVAPTGPAGSVVLFD
CNTMHGSNGNITPFPRANAFIVYNSVSNRLVEPFGGRAPRPEFIATREGFEPLTAMGGDLAEGRAA

Specific function: Catalyzes the conversion of ectoine to hydroxyectoine [H]

COG id: COG5285

COG function: function code Q; Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family. EctD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012774
- InterPro:   IPR008775 [H]

Pfam domain/function: PF05721 PhyH [H]

EC number: NA

Molecular weight: Translated: 34133; Mature: 34002

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEDLYPSRVASKPAWQPRIDPVAHSRWTPEAPISAEQHVMFERDGYLVLENLFSAAEVA
CCCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
TLQRELERMRKMPASLETETLIAEPGSGALRSVFAIHAQNRLFGRLAADERLVSVARHLL
HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDEVYIHQSRLNYKSGFDGREFYWHSDFETWHVEDGMPRMRALSMSVQLADNHAVNGPLM
CCEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHEEEEEECCCCCCCCCEE
VMPGSQRTYVSCVGETPEDHYKQSLRKQEYGVPDRDSLARLAETCGIVAPTGPAGSVVLF
EECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEE
DCNTMHGSNGNITPFPRANAFIVYNSVSNRLVEPFGGRAPRPEFIATREGFEPLTAMGGD
ECCEEECCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEECCCCCCHHHHCCCC
LAEGRAA
CCCCCCC
>Mature Secondary Structure 
TEDLYPSRVASKPAWQPRIDPVAHSRWTPEAPISAEQHVMFERDGYLVLENLFSAAEVA
CCCCCCHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHH
TLQRELERMRKMPASLETETLIAEPGSGALRSVFAIHAQNRLFGRLAADERLVSVARHLL
HHHHHHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GDEVYIHQSRLNYKSGFDGREFYWHSDFETWHVEDGMPRMRALSMSVQLADNHAVNGPLM
CCEEEEECCCCCCCCCCCCCEEEEECCCCEEEECCCCCHHHHHEEEEEECCCCCCCCCEE
VMPGSQRTYVSCVGETPEDHYKQSLRKQEYGVPDRDSLARLAETCGIVAPTGPAGSVVLF
EECCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEE
DCNTMHGSNGNITPFPRANAFIVYNSVSNRLVEPFGGRAPRPEFIATREGFEPLTAMGGD
ECCEEECCCCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCCCEEECCCCCCHHHHCCCC
LAEGRAA
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12910271 [H]