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The map label for this gene is 197104800

Identifier: 197104800

GI number: 197104800

Start: 1513033

End: 1513524

Strand: Reverse

Name: 197104800

Synonym: PHZ_c1334

Alternate gene names: NA

Gene position: 1513524-1513033 (Counterclockwise)

Preceding gene: 197104813

Following gene: 197104795

Centisome position: 37.87

GC content: 74.19

Gene sequence:

>492_bases
ATGGACACCCGCCTCACCAGCGCCCTCATCGCGATCCGGCGGATCGTGCGCGCTGCGGAATTCGCGGCGCGGGACATCTC
GCGCGCGTCGGGGCTGACGCCGTCGCAGCTGCTCGTGCTGCAGCTGGTCGACCGCCAGGGCGTGCTGAGCGCCGGCGGCA
TCGCCGAAGCCGCCCGGCTGAGCCAGGCCACCGTCACGGCCCTGCTCGACAAGCTGGAACAGCGCGGACTCCTCATGCGC
CGGCGCGGCGAGACCGACCGCCGTCGGGTCGACGTCGTGCTGACGCCGGCGGGCCGCGAGGCGCTGGCCGGAACGCCGGA
CCTCCTGCAGGACCGCTTCGCCGCGCGCTTCGAGAAGCTCGCCGACTGGGAGCAGGCGAGCCTAGTCGCGGCCCTGGAGC
GGGTCGCCGTGCTGCTGGACGCCGACACCATCGACGCCTCGCCGATCCTCGACATCGGCTCGCTGCAGCGCTCGGCGCCG
CCCGAGACCTAG

Upstream 100 bases:

>100_bases
TTACTTCGATAATCGAATCTTCTGATGAGCCTCTCGCGGCGATGCTTGCCCCACCGCCCAAGCTGCGGAACAACACCGCG
GTCGCGTCGCAGGAGCCTCC

Downstream 100 bases:

>100_bases
GCGGCCGCCAGCCGCTGGAGGTCGAGGCCGGTCGGGGCCTGGAACACCCGCAGGCCGAACTCGGGCAGGACCGCGTAGAG
GTGGTCGAAGATGTCCGACT

Product: transcriptional regulator, MarR family

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; Transcriptional Regulator; Transcriptional Regulator TrmB; Regulatory Protein MarR; Transcriptional Regulator MarR Family Protein; Transcriptional Regulator BlaI/MecI/CopY Family

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MDTRLTSALIAIRRIVRAAEFAARDISRASGLTPSQLLVLQLVDRQGVLSAGGIAEAARLSQATVTALLDKLEQRGLLMR
RRGETDRRRVDVVLTPAGREALAGTPDLLQDRFAARFEKLADWEQASLVAALERVAVLLDADTIDASPILDIGSLQRSAP
PET

Sequences:

>Translated_163_residues
MDTRLTSALIAIRRIVRAAEFAARDISRASGLTPSQLLVLQLVDRQGVLSAGGIAEAARLSQATVTALLDKLEQRGLLMR
RRGETDRRRVDVVLTPAGREALAGTPDLLQDRFAARFEKLADWEQASLVAALERVAVLLDADTIDASPILDIGSLQRSAP
PET
>Mature_163_residues
MDTRLTSALIAIRRIVRAAEFAARDISRASGLTPSQLLVLQLVDRQGVLSAGGIAEAARLSQATVTALLDKLEQRGLLMR
RRGETDRRRVDVVLTPAGREALAGTPDLLQDRFAARFEKLADWEQASLVAALERVAVLLDADTIDASPILDIGSLQRSAP
PET

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17622; Mature: 17622

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRLTSALIAIRRIVRAAEFAARDISRASGLTPSQLLVLQLVDRQGVLSAGGIAEAARL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
SQATVTALLDKLEQRGLLMRRRGETDRRRVDVVLTPAGREALAGTPDLLQDRFAARFEKL
HHHHHHHHHHHHHHCCHHHHHCCCCCHHEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHH
ADWEQASLVAALERVAVLLDADTIDASPILDIGSLQRSAPPET
HCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MDTRLTSALIAIRRIVRAAEFAARDISRASGLTPSQLLVLQLVDRQGVLSAGGIAEAARL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHH
SQATVTALLDKLEQRGLLMRRRGETDRRRVDVVLTPAGREALAGTPDLLQDRFAARFEKL
HHHHHHHHHHHHHHCCHHHHHCCCCCHHEEEEEECCCCCHHHCCCHHHHHHHHHHHHHHH
ADWEQASLVAALERVAVLLDADTIDASPILDIGSLQRSAPPET
HCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA