Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104793

Identifier: 197104793

GI number: 197104793

Start: 1505786

End: 1506391

Strand: Reverse

Name: 197104793

Synonym: PHZ_c1327

Alternate gene names: NA

Gene position: 1506391-1505786 (Counterclockwise)

Preceding gene: 197104795

Following gene: 197104791

Centisome position: 37.7

GC content: 73.43

Gene sequence:

>606_bases
ATCGCCTGTTGTCGTGGCTTCATGGCAAGTTGTGTCGTCAGAATTCGGCGGCTCGACTGCCGTCCGGCGGTTGAACCGTA
CGCCCTGGCCGTGCATTTGCGCAGCGGAGCGCTGGGCCCACGGCGACGTTCAGGCGCAGTTCACGACCCGCATTACAGTG
TAGACGCTCAACGACGCAGCCTGGAGGCGTTCGGCGTGAAACGGCGCCAGTTCCTGACATTCGCGGCCGTGGTCCTGCTG
GCCGGCCCGTCCCTGTCGGCGGATCCCGCCGAGGCCCAGGATCGCGGCCGCGGGCGTGGACGCGGCCGCGAAGGGGGCCG
GGGCGAAGGCCGCGGCCGCCGCGGCGACGACCGGCGCTGGGACCGCGGCGGCCCTGGCGAGGGCCGCGGCTATCGCCGTT
TCGACGACGCGCCGCGGGACTACGGTCCGCCCCAGCGCGTGCGGCCGGGCGGCTACCTGCCGCCGGAGCAGCGGGGCGCG
CCAGTGGACGACTACCCGCGATACCGCCTGCGCCAGCCGCCGCGCGGCTACGCCTGGCGGCGGATGGGGGACGGCTTCGT
GCTGGTCGACCCGAACGGCCGGGTCTTCGACATCGTCCCGGACTAG

Upstream 100 bases:

>100_bases
ATCTTCGAGTCCCTGTTCGGGGCCGGCGGATCCGGTTTTCGGAGCCTGCACCGGCCTTAAGAAGCACAGGAAACCAAGCT
CAAGCTGAACACATGGTTAA

Downstream 100 bases:

>100_bases
ACGCCCAGTTTCGCCTTCAGCAGCTGGTTGACGGCGCCGGGGTTGGCCTTGCCGCCCGTCGCCTTCATCACCTGGCCCAC
GAACCAGCCGATGGCCTGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MACCRGFMASCVVRIRRLDCRPAVEPYALAVHLRSGALGPRRRSGAVHDPHYSVDAQRRSLEAFGVKRRQFLTFAAVVLL
AGPSLSADPAEAQDRGRGRGRGREGGRGEGRGRRGDDRRWDRGGPGEGRGYRRFDDAPRDYGPPQRVRPGGYLPPEQRGA
PVDDYPRYRLRQPPRGYAWRRMGDGFVLVDPNGRVFDIVPD

Sequences:

>Translated_201_residues
MACCRGFMASCVVRIRRLDCRPAVEPYALAVHLRSGALGPRRRSGAVHDPHYSVDAQRRSLEAFGVKRRQFLTFAAVVLL
AGPSLSADPAEAQDRGRGRGRGREGGRGEGRGRRGDDRRWDRGGPGEGRGYRRFDDAPRDYGPPQRVRPGGYLPPEQRGA
PVDDYPRYRLRQPPRGYAWRRMGDGFVLVDPNGRVFDIVPD
>Mature_200_residues
ACCRGFMASCVVRIRRLDCRPAVEPYALAVHLRSGALGPRRRSGAVHDPHYSVDAQRRSLEAFGVKRRQFLTFAAVVLLA
GPSLSADPAEAQDRGRGRGRGREGGRGEGRGRRGDDRRWDRGGPGEGRGYRRFDDAPRDYGPPQRVRPGGYLPPEQRGAP
VDDYPRYRLRQPPRGYAWRRMGDGFVLVDPNGRVFDIVPD

Specific function: Unknown

COG id: COG5455

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22468; Mature: 22336

Theoretical pI: Translated: 11.36; Mature: 11.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACCRGFMASCVVRIRRLDCRPAVEPYALAVHLRSGALGPRRRSGAVHDPHYSVDAQRRS
CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
LEAFGVKRRQFLTFAAVVLLAGPSLSADPAEAQDRGRGRGRGREGGRGEGRGRRGDDRRW
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
DRGGPGEGRGYRRFDDAPRDYGPPQRVRPGGYLPPEQRGAPVDDYPRYRLRQPPRGYAWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHE
RMGDGFVLVDPNGRVFDIVPD
ECCCCEEEECCCCCEEEECCC
>Mature Secondary Structure 
ACCRGFMASCVVRIRRLDCRPAVEPYALAVHLRSGALGPRRRSGAVHDPHYSVDAQRRS
CHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
LEAFGVKRRQFLTFAAVVLLAGPSLSADPAEAQDRGRGRGRGREGGRGEGRGRRGDDRRW
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
DRGGPGEGRGYRRFDDAPRDYGPPQRVRPGGYLPPEQRGAPVDDYPRYRLRQPPRGYAWR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHE
RMGDGFVLVDPNGRVFDIVPD
ECCCCEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA