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The map label for this gene is ybcS [C]

Identifier: 197104749

GI number: 197104749

Start: 1459881

End: 1461218

Strand: Direct

Name: ybcS [C]

Synonym: PHZ_c1283

Alternate gene names: 197104749

Gene position: 1459881-1461218 (Clockwise)

Preceding gene: 197104748

Following gene: 197104750

Centisome position: 36.53

GC content: 73.32

Gene sequence:

>1338_bases
ATGAGTCCGCGTCACCGCGTCTCCCGGAACGCCATCGAGCTGATCAAGCGGTTCGAAGGCTACCGCCGCAAGGCCGCCCA
GCTGCCCGACGGGCGCTGGACGATCGGCTACGGCCACACGCTGACCGCGCGGGAAGGGGCCGAGGTCTCGGAAGAGGACG
CCGAGGCGCTGCTCATCTACGACCTGATCGCGGTGGCCCACGCCGTGAACGAGCACGCCCTCGTCCCGCTCACCCAGAAC
CAGTTCGACGCCCTCTGCAGCTTCGCGTTCAACCTCGGGCTCGATGCGTTCCGCACCTCGCAGGTGCTGAAGCGGCTCAA
CGCCGGCGAGACGGTGCAGGCCGCCTGCGCCATGGAGCTGTGGCGCAAGGCCGAGTTCCAGGGCCAGCGGATCGTGCTGG
ACGCCCTCGTTCGCCGCCGCTCGGCCGAGAAGGCGCTGTTCCTGACCCCGCCGGGGGACGCCTGGGTCCCGGCGCCGTCG
CCGGTGCTGCGCCCGCTGGTGGACCTGGACGTCCGCGAGCTGATCCCGTCCGAGGCGCCGACCGAACTCGTGGCCTCGCT
GGAGGGCGATCGGGTCGTCGTCAGCCGCGACGGCGAGCCGCTGGCCGTGCCGCCGCCGATCGAGGACGAGACGCCGGGCG
GGGCGGTCCGCGCCGCCGCCGAGGCGGTGACCGCGCGCCTGCAGACCATCTTCCCCGAGAACGAACCGGAACCGGCGCCC
GAGCCTCCCGCCGAGCCGGAAGCGGCCGAGCCTCACGAGGTGCGCCCGCAGGCCGATTTCGCGCCGCCGATCACCACCCT
GGCCGACGGCGCGGACGAGGCTGAGACGACCGCGCCGCCGACCGTCACGACCTATCCGCAGGAGCCCGCAGCGCCCGAAG
CGGCGCCTGAATGGTCCGAGGTCCCGCCCGAGGCCCCGGAGCGCCCCGAGGAGTTCCCCGAGGAGTTCCCCGAGGAGATC
CCGGAGGAGATTCCGGAGGGCGCCCTGGAGGCTCCCGCGCCGGCCAACGACGCCAGTCTGGTCCTCGACGCTCCGTTCGA
GGGGCGGCGGATCGTGATCGACGACATGGCGGTGCACGAGTTCATCCCCGCCCGTGTCGCCCCGCTGCCGCGCAGGAAGG
AGGGCGGCCTGTTCGCCGAGGTCGCCCTGGCGCTGCTGGGTCTGGCCTTCTTTGGGTTCGGCATCTTCTGGGGCCTGAAC
GCCCGGGCCGGGGCGGTCGCGGCCTTCCCGAATCCGCTGCTGGTCGCCTGGGCGGCGGGGGTCGCCGGCGTGGGCTTCTT
CGTGGTCGCCGTCTACCGCCTGCTGGAGCGCCTGGGCCGCCTGACCGAGCGGGACTAG

Upstream 100 bases:

>100_bases
TGGGACTCGCGGCGCTCATTCTGCTGTAAGTGGTCCCTAAGTTGCGGCGGGGGGCCACAGGCGCCGTCCGCCTGTGCCGT
TTTGGGTCAAATTCGGGGCC

Downstream 100 bases:

>100_bases
CCGCTCTCGCACCCTTGGGCGACGCATGGTAACGCATCGCCCATGATCCCGAACCACGGACCCACCCTCGAATTCGGCCT
CGGCGAGAGCGCGGACATGA

Product: lysozyme family protein

Products: Hydrolysed Peptidoglycan; Chitodextrin [C]

Alternate protein names: Phage-Related Lysozyme; Phage Related Lysozyme; Phage Lysozyme; Glycoside Hydrolase Family Protein; Glycoside Hydrolase Family; Phage Lysozyme Lysis Protein; Lysozyme Family Protein; Family; Gifsy-2 Prophage Lysozyme; Bacteriophage Lysozyme; Lysozyme-Family Localization Factor SpmX; APSE-2 Prophage; Glycoside Hydrolase; Mur1 Protein

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MSPRHRVSRNAIELIKRFEGYRRKAAQLPDGRWTIGYGHTLTAREGAEVSEEDAEALLIYDLIAVAHAVNEHALVPLTQN
QFDALCSFAFNLGLDAFRTSQVLKRLNAGETVQAACAMELWRKAEFQGQRIVLDALVRRRSAEKALFLTPPGDAWVPAPS
PVLRPLVDLDVRELIPSEAPTELVASLEGDRVVVSRDGEPLAVPPPIEDETPGGAVRAAAEAVTARLQTIFPENEPEPAP
EPPAEPEAAEPHEVRPQADFAPPITTLADGADEAETTAPPTVTTYPQEPAAPEAAPEWSEVPPEAPERPEEFPEEFPEEI
PEEIPEGALEAPAPANDASLVLDAPFEGRRIVIDDMAVHEFIPARVAPLPRRKEGGLFAEVALALLGLAFFGFGIFWGLN
ARAGAVAAFPNPLLVAWAAGVAGVGFFVVAVYRLLERLGRLTERD

Sequences:

>Translated_445_residues
MSPRHRVSRNAIELIKRFEGYRRKAAQLPDGRWTIGYGHTLTAREGAEVSEEDAEALLIYDLIAVAHAVNEHALVPLTQN
QFDALCSFAFNLGLDAFRTSQVLKRLNAGETVQAACAMELWRKAEFQGQRIVLDALVRRRSAEKALFLTPPGDAWVPAPS
PVLRPLVDLDVRELIPSEAPTELVASLEGDRVVVSRDGEPLAVPPPIEDETPGGAVRAAAEAVTARLQTIFPENEPEPAP
EPPAEPEAAEPHEVRPQADFAPPITTLADGADEAETTAPPTVTTYPQEPAAPEAAPEWSEVPPEAPERPEEFPEEFPEEI
PEEIPEGALEAPAPANDASLVLDAPFEGRRIVIDDMAVHEFIPARVAPLPRRKEGGLFAEVALALLGLAFFGFGIFWGLN
ARAGAVAAFPNPLLVAWAAGVAGVGFFVVAVYRLLERLGRLTERD
>Mature_444_residues
SPRHRVSRNAIELIKRFEGYRRKAAQLPDGRWTIGYGHTLTAREGAEVSEEDAEALLIYDLIAVAHAVNEHALVPLTQNQ
FDALCSFAFNLGLDAFRTSQVLKRLNAGETVQAACAMELWRKAEFQGQRIVLDALVRRRSAEKALFLTPPGDAWVPAPSP
VLRPLVDLDVRELIPSEAPTELVASLEGDRVVVSRDGEPLAVPPPIEDETPGGAVRAAAEAVTARLQTIFPENEPEPAPE
PPAEPEAAEPHEVRPQADFAPPITTLADGADEAETTAPPTVTTYPQEPAAPEAAPEWSEVPPEAPERPEEFPEEFPEEIP
EEIPEGALEAPAPANDASLVLDAPFEGRRIVIDDMAVHEFIPARVAPLPRRKEGGLFAEVALALLGLAFFGFGIFWGLNA
RAGAVAAFPNPLLVAWAAGVAGVGFFVVAVYRLLERLGRLTERD

Specific function: Essential For Lysis Of Bacterial Cell Wall, By Showing Cell Wall Hydrolyzing Activity (By Similarity). [C]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.17 [C]

Molecular weight: Translated: 48170; Mature: 48039

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPRHRVSRNAIELIKRFEGYRRKAAQLPDGRWTIGYGHTLTAREGAEVSEEDAEALLIY
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCCCCHHHHHHHHHH
DLIAVAHAVNEHALVPLTQNQFDALCSFAFNLGLDAFRTSQVLKRLNAGETVQAACAMEL
HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHH
WRKAEFQGQRIVLDALVRRRSAEKALFLTPPGDAWVPAPSPVLRPLVDLDVRELIPSEAP
HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHCCCCCH
TELVASLEGDRVVVSRDGEPLAVPPPIEDETPGGAVRAAAEAVTARLQTIFPENEPEPAP
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPPAEPEAAEPHEVRPQADFAPPITTLADGADEAETTAPPTVTTYPQEPAAPEAAPEWSE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
VPPEAPERPEEFPEEFPEEIPEEIPEGALEAPAPANDASLVLDAPFEGRRIVIDDMAVHE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEEECHHHHH
FIPARVAPLPRRKEGGLFAEVALALLGLAFFGFGIFWGLNARAGAVAAFPNPLLVAWAAG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
VAGVGFFVVAVYRLLERLGRLTERD
HHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SPRHRVSRNAIELIKRFEGYRRKAAQLPDGRWTIGYGHTLTAREGAEVSEEDAEALLIY
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEECCCCCCCCCHHHHHHHHHH
DLIAVAHAVNEHALVPLTQNQFDALCSFAFNLGLDAFRTSQVLKRLNAGETVQAACAMEL
HHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHH
WRKAEFQGQRIVLDALVRRRSAEKALFLTPPGDAWVPAPSPVLRPLVDLDVRELIPSEAP
HHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHCCCHHHHCCCCCH
TELVASLEGDRVVVSRDGEPLAVPPPIEDETPGGAVRAAAEAVTARLQTIFPENEPEPAP
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPPAEPEAAEPHEVRPQADFAPPITTLADGADEAETTAPPTVTTYPQEPAAPEAAPEWSE
CCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC
VPPEAPERPEEFPEEFPEEIPEEIPEGALEAPAPANDASLVLDAPFEGRRIVIDDMAVHE
CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEEECHHHHH
FIPARVAPLPRRKEGGLFAEVALALLGLAFFGFGIFWGLNARAGAVAAFPNPLLVAWAAG
HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHH
VAGVGFFVVAVYRLLERLGRLTERD
HHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Peptidoglycan (N-acetylmuraminic acid and N-acetyl-D-glucosamine Residues); Chitodextrin (N-acetyl-D-glucosamine residues) [C]

Specific reaction: Hydrolysis of beta-linkage between N-acetylmuraminic acid and N-acetyl- D-glucosamine residues in peptidoglycan and between N-acetyl-D-glucosamine residues in chitodextrin [C]

General reaction: O-Glycosyl bond hydrolysis; glycosyltransfer to saccharides other alcohols and H2O [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA