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The map label for this gene is mcpU [H]

Identifier: 197104664

GI number: 197104664

Start: 1380883

End: 1383297

Strand: Direct

Name: mcpU [H]

Synonym: PHZ_c1198

Alternate gene names: 197104664

Gene position: 1380883-1383297 (Clockwise)

Preceding gene: 197104663

Following gene: 197104665

Centisome position: 34.55

GC content: 69.36

Gene sequence:

>2415_bases
ATGCCGGCGTCCACCTCATGCAGCGGCTCGGTGCGGAGGAAGGCTTCGACGGCCGATGGGTCGAGTACGAAGTGGGCGTC
TCGCGCGCCCTCGGCCGCGCGAGCGCCGCGCTCATCGTCAACTATTCGCCGGACGCCGACGGCCCCGCTCGGGAGGCCTG
GTGGAACCAGGCTCTGGTCGCCTGGGGCCTCACGGACGCGAGCCGGATCTCGGCAGCCGTGGGTCGCCGGACGGCCGACG
GTGGGGGCGACTACAACGCCTGGAATATCGGGTTCACGCACCGAACCCCGGCGGGCGCGGCCTTCGACGTTCGCTTCCTC
GACACCGACAAGCACGAGTTCGGCGGCGAGTTCGGTCGACGCCTCGTCGGCACGCTCTCCCACACCTTCTGATTCCCACA
CCTTATGGCGGTCCGGACGTCGACCGGACCGAGATGCACCTCGTGTGCGACCGCCGCCAGAAAGAGGCCCCACAATGCGT
CTTGCCAACCTATCCGTATCGCGAAAGCTGGTCCTGGCTTTCGGGATCATGGTCGCCATCAGCATCGCGTCTTCCGCCCT
CAGCATCGTCAGGATGCGCGAGGCGGCGGAGGCGACGCGGTGGAACAACCACACCCATGAGGTGCTGGCCGCCGCCAACG
CGGTGGGCGCGGCCATGGTCGACCAGGAGACGGGCGTCCGGGGCTTCCTGATCGCGGGCGACGATCGCTTCCTCGAGCCC
TACGAGGCGGGCGGCAAGGCTTACGGCGAGGCGTTCGAGCGCCTGAAGACCCTGACCTCTGACAACGCGGAACAGCAGGT
CCGCATTGAGGCCCTGGGCGTTGCGGCGGCTGGCTGGCGCGACCAGGTCGCGGCCGTCGAGATCCGCAAGATGAAGGATC
CCGCGATGGTCGAGGAAGCTCGCCAGATGGAGGCGTCGCAGGCGGGGAAGACGTTCATGGACGAGATCCGCGGGCGGCTG
GGCGAAATCCGCTCGGCGGAAGAGGTCCTGCTTGAGAAGCGCTCCACGGAGCAGCGCCAGGACGAGGCCGAAGCCCAACT
CACACTGATCCTCGGCGGCGTGGCCGGCGTGGTCTGCGCGATCATCCTGGGCGTCATGCTGAGCCGGGCGATCGCCGCGC
CGCTCGTGGCCCTGCAGGGCGTGATGCGCAAGCTGGCGTCCGGCGACAACACCGTCGAGGTCGACGGCGTCGATCGCAAG
GACGAGGTGGGGGCCATGGCCGCGGCCGTGCAGGTGTTCAAGGAGGCGGCCATCGAGAAGCTGCGGCTGGAGGGCATGAC
GGCCGAGCAGGCGAAGGCCGCCGAAGAGGACCGCCGCCGGCAGGAGACGGCCAAGGCCGAGGCCGCCCGCCAGCTGGCTC
TGGTCGTCGAGAACATCGCCGCCGGCCTGGAAAAGCTGTCCGGCGGGGAGCTCACCTACCGCATCGTCCAGCCGTTCTCG
GGCGAGTACGAGAAGCTCCGCACCGACTTCAACGCCGCCATGGGCCAGCTGCAGGAAACGATGCAGGTGGTCGCGGGCAA
TGTTCGCGCCATGACGGCGGGCGCCGGCGAGATCAGCCAGGCCGCCGACGATCTTTCCAAGCGGACCGAACAGCAGGCCG
CGAGCCTGGAGGAGACCGCCGCGGCGCTCGACCAGATCACCGCCACCGTCCGGAAGACCGCTGAGGGGGCGATCGACGCC
AGCACGGTGGTGAACACCGCCAAGGAAGACGCCGAACACTCCGGCGACGTCGTCCGCAACGCCGTCTCCGCAATGAGCGA
GATCGAACGGTCCGCCCAGCAGATCAGCCAGATCATCGGAGTGATCGACGAGATCGCCTTCCAGACCAACCTGCTGGCCC
TGAATGCGGGCGTGGAAGCGGCGCGGGCCGGCGACGCCGGCAAGGGCTTCGCGGTGGTCGCTTCGGAAGTCCGCGCGCTC
GCCCAGCGCTCGGCCGAGGCGGCCAAGGAGATCAAGACGCTGATCGGCGCGTCCACCCAGCAGGTGGCGCAGGGCGTCTC
GCTGGTGGGTGAGACCGGGGAGGCCCTGGAGCGCATCGTTGGCCAGGTTTCCCGGATCACCAGCATCGTGACCGAGATCG
CCGCCTCCGCCCAGGAGCAGGCCACAGGGCTGCATCAGGTGAACACAGCGGTGAACCAGATGGACCAGGTGACCCAGCAG
AACGCCGCCATGGTGGAGGAGTCGACGGCCGCCAGTCACAACCTGGCGCAGGAAGCGCAGGAGCTTTCGACCCTCATCGG
ACGCTTCAAGGTCGGGCAGACGGCGGCGGCGCCGCTCAAGGCGCGGACCCCTGCGGCCCCCCGCGGAAGGCGCCCGGCGC
TGAAGGCGGTCTCGAGCCACGTCGGCGGCGGAGGGGCCCTGCGCAAGCCGGAGGTCGAAGTCGTGGCCGACGCCGATCGC
TGGGAGGAGTTCTGA

Upstream 100 bases:

>100_bases
GCGAGCGCCTCGGCGAACACGGTCAGGCTCGGTCCCGGTGGCGAGGGCGAAGCAAACCTGACCGTGGGCGCCAGGTCGAA
GGCGGCCGGCTTCGAAGGCC

Downstream 100 bases:

>100_bases
TGACGCGCCAGGCCCCACCCGTACGCGACCTGCCGGCCGAGCTGATCTCGATCCGTGTCGGCGACCAGCTGTTCGCCCTC
GACATCATGGTGGTTCGCGA

Product: methyl-accepting chemotaxis protein McpU

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 804; Mature: 803

Protein sequence:

>804_residues
MPASTSCSGSVRRKASTADGSSTKWASRAPSAARAPRSSSTIRRTPTAPLGRPGGTRLWSPGASRTRAGSRQPWVAGRPT
VGATTTPGISGSRTEPRRARPSTFASSTPTSTSSAASSVDASSARSPTPSDSHTLWRSGRRPDRDAPRVRPPPERGPTMR
LANLSVSRKLVLAFGIMVAISIASSALSIVRMREAAEATRWNNHTHEVLAAANAVGAAMVDQETGVRGFLIAGDDRFLEP
YEAGGKAYGEAFERLKTLTSDNAEQQVRIEALGVAAAGWRDQVAAVEIRKMKDPAMVEEARQMEASQAGKTFMDEIRGRL
GEIRSAEEVLLEKRSTEQRQDEAEAQLTLILGGVAGVVCAIILGVMLSRAIAAPLVALQGVMRKLASGDNTVEVDGVDRK
DEVGAMAAAVQVFKEAAIEKLRLEGMTAEQAKAAEEDRRRQETAKAEAARQLALVVENIAAGLEKLSGGELTYRIVQPFS
GEYEKLRTDFNAAMGQLQETMQVVAGNVRAMTAGAGEISQAADDLSKRTEQQAASLEETAAALDQITATVRKTAEGAIDA
STVVNTAKEDAEHSGDVVRNAVSAMSEIERSAQQISQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVASEVRAL
AQRSAEAAKEIKTLIGASTQQVAQGVSLVGETGEALERIVGQVSRITSIVTEIAASAQEQATGLHQVNTAVNQMDQVTQQ
NAAMVEESTAASHNLAQEAQELSTLIGRFKVGQTAAAPLKARTPAAPRGRRPALKAVSSHVGGGGALRKPEVEVVADADR
WEEF

Sequences:

>Translated_804_residues
MPASTSCSGSVRRKASTADGSSTKWASRAPSAARAPRSSSTIRRTPTAPLGRPGGTRLWSPGASRTRAGSRQPWVAGRPT
VGATTTPGISGSRTEPRRARPSTFASSTPTSTSSAASSVDASSARSPTPSDSHTLWRSGRRPDRDAPRVRPPPERGPTMR
LANLSVSRKLVLAFGIMVAISIASSALSIVRMREAAEATRWNNHTHEVLAAANAVGAAMVDQETGVRGFLIAGDDRFLEP
YEAGGKAYGEAFERLKTLTSDNAEQQVRIEALGVAAAGWRDQVAAVEIRKMKDPAMVEEARQMEASQAGKTFMDEIRGRL
GEIRSAEEVLLEKRSTEQRQDEAEAQLTLILGGVAGVVCAIILGVMLSRAIAAPLVALQGVMRKLASGDNTVEVDGVDRK
DEVGAMAAAVQVFKEAAIEKLRLEGMTAEQAKAAEEDRRRQETAKAEAARQLALVVENIAAGLEKLSGGELTYRIVQPFS
GEYEKLRTDFNAAMGQLQETMQVVAGNVRAMTAGAGEISQAADDLSKRTEQQAASLEETAAALDQITATVRKTAEGAIDA
STVVNTAKEDAEHSGDVVRNAVSAMSEIERSAQQISQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVASEVRAL
AQRSAEAAKEIKTLIGASTQQVAQGVSLVGETGEALERIVGQVSRITSIVTEIAASAQEQATGLHQVNTAVNQMDQVTQQ
NAAMVEESTAASHNLAQEAQELSTLIGRFKVGQTAAAPLKARTPAAPRGRRPALKAVSSHVGGGGALRKPEVEVVADADR
WEEF
>Mature_803_residues
PASTSCSGSVRRKASTADGSSTKWASRAPSAARAPRSSSTIRRTPTAPLGRPGGTRLWSPGASRTRAGSRQPWVAGRPTV
GATTTPGISGSRTEPRRARPSTFASSTPTSTSSAASSVDASSARSPTPSDSHTLWRSGRRPDRDAPRVRPPPERGPTMRL
ANLSVSRKLVLAFGIMVAISIASSALSIVRMREAAEATRWNNHTHEVLAAANAVGAAMVDQETGVRGFLIAGDDRFLEPY
EAGGKAYGEAFERLKTLTSDNAEQQVRIEALGVAAAGWRDQVAAVEIRKMKDPAMVEEARQMEASQAGKTFMDEIRGRLG
EIRSAEEVLLEKRSTEQRQDEAEAQLTLILGGVAGVVCAIILGVMLSRAIAAPLVALQGVMRKLASGDNTVEVDGVDRKD
EVGAMAAAVQVFKEAAIEKLRLEGMTAEQAKAAEEDRRRQETAKAEAARQLALVVENIAAGLEKLSGGELTYRIVQPFSG
EYEKLRTDFNAAMGQLQETMQVVAGNVRAMTAGAGEISQAADDLSKRTEQQAASLEETAAALDQITATVRKTAEGAIDAS
TVVNTAKEDAEHSGDVVRNAVSAMSEIERSAQQISQIIGVIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVASEVRALA
QRSAEAAKEIKTLIGASTQQVAQGVSLVGETGEALERIVGQVSRITSIVTEIAASAQEQATGLHQVNTAVNQMDQVTQQN
AAMVEESTAASHNLAQEAQELSTLIGRFKVGQTAAAPLKARTPAAPRGRRPALKAVSSHVGGGGALRKPEVEVVADADRW
EEF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=309, Percent_Identity=49.5145631067961, Blast_Score=232, Evalue=8e-62,
Organism=Escherichia coli, GI1788195, Length=329, Percent_Identity=45.2887537993921, Blast_Score=226, Evalue=5e-60,
Organism=Escherichia coli, GI1788194, Length=272, Percent_Identity=48.1617647058824, Blast_Score=211, Evalue=1e-55,
Organism=Escherichia coli, GI1787690, Length=318, Percent_Identity=42.7672955974843, Blast_Score=211, Evalue=2e-55,
Organism=Escherichia coli, GI1789453, Length=254, Percent_Identity=39.3700787401575, Blast_Score=166, Evalue=6e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 84726; Mature: 84595

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASTSCSGSVRRKASTADGSSTKWASRAPSAARAPRSSSTIRRTPTAPLGRPGGTRLWS
CCCCCCCCCHHHHHCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGASRTRAGSRQPWVAGRPTVGATTTPGISGSRTEPRRARPSTFASSTPTSTSSAASSVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
ASSARSPTPSDSHTLWRSGRRPDRDAPRVRPPPERGPTMRLANLSVSRKLVLAFGIMVAI
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
SIASSALSIVRMREAAEATRWNNHTHEVLAAANAVGAAMVDQETGVRGFLIAGDDRFLEP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
YEAGGKAYGEAFERLKTLTSDNAEQQVRIEALGVAAAGWRDQVAAVEIRKMKDPAMVEEA
HHCCCHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
RQMEASQAGKTFMDEIRGRLGEIRSAEEVLLEKRSTEQRQDEAEAQLTLILGGVAGVVCA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGVMLSRAIAAPLVALQGVMRKLASGDNTVEVDGVDRKDEVGAMAAAVQVFKEAAIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LRLEGMTAEQAKAAEEDRRRQETAKAEAARQLALVVENIAAGLEKLSGGELTYRIVQPFS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GEYEKLRTDFNAAMGQLQETMQVVAGNVRAMTAGAGEISQAADDLSKRTEQQAASLEETA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALDQITATVRKTAEGAIDASTVVNTAKEDAEHSGDVVRNAVSAMSEIERSAQQISQIIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVASEVRALAQRSAEAAKEIKTLIGASTQ
HHHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QVAQGVSLVGETGEALERIVGQVSRITSIVTEIAASAQEQATGLHQVNTAVNQMDQVTQQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAMVEESTAASHNLAQEAQELSTLIGRFKVGQTAAAPLKARTPAAPRGRRPALKAVSSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHH
VGGGGALRKPEVEVVADADRWEEF
CCCCCCCCCCCCEEEECCHHCCCC
>Mature Secondary Structure 
PASTSCSGSVRRKASTADGSSTKWASRAPSAARAPRSSSTIRRTPTAPLGRPGGTRLWS
CCCCCCCCHHHHHCCCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
PGASRTRAGSRQPWVAGRPTVGATTTPGISGSRTEPRRARPSTFASSTPTSTSSAASSVD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
ASSARSPTPSDSHTLWRSGRRPDRDAPRVRPPPERGPTMRLANLSVSRKLVLAFGIMVAI
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH
SIASSALSIVRMREAAEATRWNNHTHEVLAAANAVGAAMVDQETGVRGFLIAGDDRFLEP
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCC
YEAGGKAYGEAFERLKTLTSDNAEQQVRIEALGVAAAGWRDQVAAVEIRKMKDPAMVEEA
HHCCCHHHHHHHHHHHHHHCCCCHHEEEHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHH
RQMEASQAGKTFMDEIRGRLGEIRSAEEVLLEKRSTEQRQDEAEAQLTLILGGVAGVVCA
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IILGVMLSRAIAAPLVALQGVMRKLASGDNTVEVDGVDRKDEVGAMAAAVQVFKEAAIEK
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
LRLEGMTAEQAKAAEEDRRRQETAKAEAARQLALVVENIAAGLEKLSGGELTYRIVQPFS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC
GEYEKLRTDFNAAMGQLQETMQVVAGNVRAMTAGAGEISQAADDLSKRTEQQAASLEETA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
AALDQITATVRKTAEGAIDASTVVNTAKEDAEHSGDVVRNAVSAMSEIERSAQQISQIIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIDEIAFQTNLLALNAGVEAARAGDAGKGFAVVASEVRALAQRSAEAAKEIKTLIGASTQ
HHHHHHHHHHHEEEECCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
QVAQGVSLVGETGEALERIVGQVSRITSIVTEIAASAQEQATGLHQVNTAVNQMDQVTQQ
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NAAMVEESTAASHNLAQEAQELSTLIGRFKVGQTAAAPLKARTPAAPRGRRPALKAVSSH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCHHHHHHHHH
VGGGGALRKPEVEVVADADRWEEF
CCCCCCCCCCCCEEEECCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]