Click here to switch to the map view.

The map label for this gene is frc [H]

Identifier: 197104641

GI number: 197104641

Start: 1348308

End: 1349504

Strand: Reverse

Name: frc [H]

Synonym: PHZ_c1175

Alternate gene names: 197104641

Gene position: 1349504-1348308 (Counterclockwise)

Preceding gene: 197104642

Following gene: 197104638

Centisome position: 33.77

GC content: 74.02

Gene sequence:

>1197_bases
GTGCTGCTGCAGGGCCTGAAGGTCGTCGACTTCACCGCCTATATCGCCGGGCCCGGAGCGGCCTGCATCCTGGGCGACTG
GGGGGCGGACGTGATCAAGGTCGAGCGGCCCGGCGGCGATTCCATGCGCCACATCTTCGCCGACCTGAAGACGGACCTGG
GGGCCAACCCGACCTTCGATCTCGACAACCGCGGCAAGCGCGGGGTCGTGCTCGACATCTCGAAGCCGGAGGGGCGGGAG
GCGCTGGCGAAGCTGGCCGAGCAGGCCGACGTCTTCCTCACCAACGTGCGGCCGGCCTCCCTGCGCCGCGCCGGGCTGGA
CGACGAGACCCTGCGGGCGGCCAACCCGCGCCTCGTCTACGCGGTCATCACCGGCTACGGCCTGGAAGGGCCCGAGGCGC
ACAAGCCCGGCTTCGACGTCACTGCCTTCTGGGCCCGGGCCGGCGTCGCCAACATGACCGCGCCCAAGGGCATGGACCCG
TTCCTGCTGCGCTCGGGGGTGGGCGACCACACGACCTCGCTGGCGACCGTCTCGGCGATCCTGGCCGCCCTCTACGAGCG
CGAGCGCACCGGGGTGGGGCGGCTGGTCCAGACCTCGCTGCTGGCCACCGGCATCTACGTGATGAGCTCGGACCTGGCGG
TGCAGCTCAGGTTCGGGCGGCTGGCGTCGGCGCGGACCCGGGACAACCCGATCAACGCCCTGGCCAACTTCTACAAGAGC
GCCGACGGCCGGTGGTTCGTGCACAACCCGCGCGGCCCCGGCGGCGGCTGGGAGGCGTTCTGCGAGGCGGCCGGACGCCC
GGACCTGATCGCCGACGAACGCTTCGCCACCGGCAAGGCCCGCCGCGAGAACGCCAAGGCCCTGACCGAGGCCTTCGACG
AGGGCTTCGGCGCCCTGCCCTTCGACGAGATCGCCCGGCGGCTGGATGCGGCCGACCTCGTCTGGGCGCCCGTGCAGACC
CCGGCCGAGGTCGCCGCCGATCCGCAGGCCGCGGCGGCGGGCGCCTTCCTGGAGATCGAGGACGGCCAGGGCGGTACCTA
CCGCTCGGTGGCCGCGCCCGCCCGCTTCCCCGGGGCCGACGCCGAACGCCGCCCGCCCGCGCCGGCGCTGGGCCAGCACA
CCCGCGAGGTCCTGGCCGAGCTGGGCTACGGCGAGGCGCAGATCGAGGCCATGCTGCAGGCCGGCGCGGCGGCGTAG

Upstream 100 bases:

>100_bases
CAGGCGCTCTCGCCCCGCCCCTCGCCCGCCAATGACCGCGCGGTAGCCTGACAAGGCCTCCAACACGCGTTTAAATGCCT
CCAAACAGAGGGAGGCGCGC

Downstream 100 bases:

>100_bases
GGGCCCGTCACCGCGCCTCGCTGGGGACCGGCCGGGCCTCCAGCTCGGCGCCGCGCAGATAGGCGGCGCTGAGCTCGCGG
TAGTACCGGGAGTTCAGGGC

Product: fatty acid-CoA racemase

Products: NA

Alternate protein names: Formyl-CoA transferase [H]

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLLQGLKVVDFTAYIAGPGAACILGDWGADVIKVERPGGDSMRHIFADLKTDLGANPTFDLDNRGKRGVVLDISKPEGRE
ALAKLAEQADVFLTNVRPASLRRAGLDDETLRAANPRLVYAVITGYGLEGPEAHKPGFDVTAFWARAGVANMTAPKGMDP
FLLRSGVGDHTTSLATVSAILAALYERERTGVGRLVQTSLLATGIYVMSSDLAVQLRFGRLASARTRDNPINALANFYKS
ADGRWFVHNPRGPGGGWEAFCEAAGRPDLIADERFATGKARRENAKALTEAFDEGFGALPFDEIARRLDAADLVWAPVQT
PAEVAADPQAAAAGAFLEIEDGQGGTYRSVAAPARFPGADAERRPPAPALGQHTREVLAELGYGEAQIEAMLQAGAAA

Sequences:

>Translated_398_residues
MLLQGLKVVDFTAYIAGPGAACILGDWGADVIKVERPGGDSMRHIFADLKTDLGANPTFDLDNRGKRGVVLDISKPEGRE
ALAKLAEQADVFLTNVRPASLRRAGLDDETLRAANPRLVYAVITGYGLEGPEAHKPGFDVTAFWARAGVANMTAPKGMDP
FLLRSGVGDHTTSLATVSAILAALYERERTGVGRLVQTSLLATGIYVMSSDLAVQLRFGRLASARTRDNPINALANFYKS
ADGRWFVHNPRGPGGGWEAFCEAAGRPDLIADERFATGKARRENAKALTEAFDEGFGALPFDEIARRLDAADLVWAPVQT
PAEVAADPQAAAAGAFLEIEDGQGGTYRSVAAPARFPGADAERRPPAPALGQHTREVLAELGYGEAQIEAMLQAGAAA
>Mature_398_residues
MLLQGLKVVDFTAYIAGPGAACILGDWGADVIKVERPGGDSMRHIFADLKTDLGANPTFDLDNRGKRGVVLDISKPEGRE
ALAKLAEQADVFLTNVRPASLRRAGLDDETLRAANPRLVYAVITGYGLEGPEAHKPGFDVTAFWARAGVANMTAPKGMDP
FLLRSGVGDHTTSLATVSAILAALYERERTGVGRLVQTSLLATGIYVMSSDLAVQLRFGRLASARTRDNPINALANFYKS
ADGRWFVHNPRGPGGGWEAFCEAAGRPDLIADERFATGKARRENAKALTEAFDEGFGALPFDEIARRLDAADLVWAPVQT
PAEVAADPQAAAAGAFLEIEDGQGGTYRSVAAPARFPGADAERRPPAPALGQHTREVLAELGYGEAQIEAMLQAGAAA

Specific function: Catalyzes the transfer of the CoA moiety from formyl-CoA to oxalate [H]

COG id: COG1804

COG function: function code C; Predicted acyl-CoA transferases/carnitine dehydratase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CaiB/BaiF CoA-transferase family [H]

Homologues:

Organism=Homo sapiens, GI300863128, Length=406, Percent_Identity=32.512315270936, Blast_Score=171, Evalue=7e-43,
Organism=Homo sapiens, GI300863124, Length=431, Percent_Identity=30.6264501160093, Blast_Score=161, Evalue=1e-39,
Organism=Homo sapiens, GI300863126, Length=402, Percent_Identity=30.3482587064677, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI13376042, Length=431, Percent_Identity=27.8422273781903, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI42794625, Length=392, Percent_Identity=27.5510204081633, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI266456254, Length=395, Percent_Identity=27.3417721518987, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI266458397, Length=250, Percent_Identity=30.4, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI266458393, Length=250, Percent_Identity=30.4, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI266458395, Length=141, Percent_Identity=34.7517730496454, Blast_Score=86, Evalue=7e-17,
Organism=Homo sapiens, GI42822893, Length=141, Percent_Identity=34.7517730496454, Blast_Score=85, Evalue=9e-17,
Organism=Escherichia coli, GI1788717, Length=415, Percent_Identity=29.8795180722892, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI87082093, Length=383, Percent_Identity=26.8929503916449, Blast_Score=132, Evalue=6e-32,
Organism=Escherichia coli, GI1786222, Length=410, Percent_Identity=26.3414634146341, Blast_Score=94, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI115535051, Length=358, Percent_Identity=23.7430167597765, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI32564160, Length=211, Percent_Identity=26.0663507109005, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24648431, Length=395, Percent_Identity=32.4050632911392, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI24585488, Length=367, Percent_Identity=27.7929155313352, Blast_Score=102, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003673
- InterPro:   IPR017659 [H]

Pfam domain/function: PF02515 CoA_transf_3 [H]

EC number: =2.8.3.16 [H]

Molecular weight: Translated: 42224; Mature: 42224

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLQGLKVVDFTAYIAGPGAACILGDWGADVIKVERPGGDSMRHIFADLKTDLGANPTFD
CCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
LDNRGKRGVVLDISKPEGREALAKLAEQADVFLTNVRPASLRRAGLDDETLRAANPRLVY
CCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEECCCHHHHHHCCCCHHHHHCCCCCEEE
AVITGYGLEGPEAHKPGFDVTAFWARAGVANMTAPKGMDPFLLRSGVGDHTTSLATVSAI
EEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHH
LAALYERERTGVGRLVQTSLLATGIYVMSSDLAVQLRFGRLASARTRDNPINALANFYKS
HHHHHHHHHCCHHHHHHHHHHHHHHHEEECCEEEEEECCCHHCCCCCCCHHHHHHHHHHC
ADGRWFVHNPRGPGGGWEAFCEAAGRPDLIADERFATGKARRENAKALTEAFDEGFGALP
CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
FDEIARRLDAADLVWAPVQTPAEVAADPQAAAAGAFLEIEDGQGGTYRSVAAPARFPGAD
HHHHHHHCCCCCEEEECCCCCHHHHCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCC
AERRPPAPALGQHTREVLAELGYGEAQIEAMLQAGAAA
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MLLQGLKVVDFTAYIAGPGAACILGDWGADVIKVERPGGDSMRHIFADLKTDLGANPTFD
CCCCCCEEEEEEEEECCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCC
LDNRGKRGVVLDISKPEGREALAKLAEQADVFLTNVRPASLRRAGLDDETLRAANPRLVY
CCCCCCCCEEEECCCCCCHHHHHHHHHHCCEEEECCCHHHHHHCCCCHHHHHCCCCCEEE
AVITGYGLEGPEAHKPGFDVTAFWARAGVANMTAPKGMDPFLLRSGVGDHTTSLATVSAI
EEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHH
LAALYERERTGVGRLVQTSLLATGIYVMSSDLAVQLRFGRLASARTRDNPINALANFYKS
HHHHHHHHHCCHHHHHHHHHHHHHHHEEECCEEEEEECCCHHCCCCCCCHHHHHHHHHHC
ADGRWFVHNPRGPGGGWEAFCEAAGRPDLIADERFATGKARRENAKALTEAFDEGFGALP
CCCCEEEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
FDEIARRLDAADLVWAPVQTPAEVAADPQAAAAGAFLEIEDGQGGTYRSVAAPARFPGAD
HHHHHHHCCCCCEEEECCCCCHHHHCCCCHHHCCEEEEEECCCCCCCCCCCCCCCCCCCC
AERRPPAPALGQHTREVLAELGYGEAQIEAMLQAGAAA
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA