| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104626
Identifier: 197104626
GI number: 197104626
Start: 1331786
End: 1332280
Strand: Reverse
Name: 197104626
Synonym: PHZ_c1160
Alternate gene names: NA
Gene position: 1332280-1331786 (Counterclockwise)
Preceding gene: 197104630
Following gene: 197104624
Centisome position: 33.34
GC content: 69.7
Gene sequence:
>495_bases TTGTCATTTGCCCGCCGCGGCGGACGCATGGGACCGCTCGGCGCTTCAACGGGGGACTCCATGGACGAGACAGCCGCCAT CGGCGCCGTGATCGACGAGATGTACGCGATGATCTCGGGGCCCGCCGGCCCGCGGGACTGGTCGCGCCAGCGCGCCGTCT TCCACCCGCAGTCCCGGCAGATGCGCACCGGCGTGGACGAGCACGGCGCCCCCTGGATCAGGATCATGTCGCCCGCCGAA TACGAGGCCGACGTGACGCCCTTCTTCATGGCCAACCCGTTCTTCGAGGTCGAGATCGCCCGGCGGATCGACGTGCTGGG GAACATGGCCCACGTCTGGAGCCTCTACGAGGCCCGCACCGCGCCCGACGACGCCACGCCCGAGCGGCGGGGGATCAACT CGATCCAGCTCTACCGGGACGCGGGCGGGGACTGGAGGATCATCTCGATGATCTGGGACAACGAGCGGCCGGGCGTGCAG GCCCAGCCCTTCTAG
Upstream 100 bases:
>100_bases GGCGGAACGTCATCGATGTCTCTCTCCGGCGGCGCGGCCGTCGCCGCGCGCGTTTGCAGGGGTTCTACACCGCCCCGCGC CGGCCGCGACCGTTACAGCT
Downstream 100 bases:
>100_bases CTAGCGCTCGTCCGCCCTTTCGCGGATCCGCACGATCAGCGACTGGCTGGCGGTGGCCATCAGCTCGCCGTCCTCGGCGA ACAGGTACATGGCGCCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSFARRGGRMGPLGASTGDSMDETAAIGAVIDEMYAMISGPAGPRDWSRQRAVFHPQSRQMRTGVDEHGAPWIRIMSPAE YEADVTPFFMANPFFEVEIARRIDVLGNMAHVWSLYEARTAPDDATPERRGINSIQLYRDAGGDWRIISMIWDNERPGVQ AQPF
Sequences:
>Translated_164_residues MSFARRGGRMGPLGASTGDSMDETAAIGAVIDEMYAMISGPAGPRDWSRQRAVFHPQSRQMRTGVDEHGAPWIRIMSPAE YEADVTPFFMANPFFEVEIARRIDVLGNMAHVWSLYEARTAPDDATPERRGINSIQLYRDAGGDWRIISMIWDNERPGVQ AQPF >Mature_163_residues SFARRGGRMGPLGASTGDSMDETAAIGAVIDEMYAMISGPAGPRDWSRQRAVFHPQSRQMRTGVDEHGAPWIRIMSPAEY EADVTPFFMANPFFEVEIARRIDVLGNMAHVWSLYEARTAPDDATPERRGINSIQLYRDAGGDWRIISMIWDNERPGVQA QPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18361; Mature: 18230
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFARRGGRMGPLGASTGDSMDETAAIGAVIDEMYAMISGPAGPRDWSRQRAVFHPQSRQ CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCH MRTGVDEHGAPWIRIMSPAEYEADVTPFFMANPFFEVEIARRIDVLGNMAHVWSLYEART HHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCC APDDATPERRGINSIQLYRDAGGDWRIISMIWDNERPGVQAQPF CCCCCCCHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCC >Mature Secondary Structure SFARRGGRMGPLGASTGDSMDETAAIGAVIDEMYAMISGPAGPRDWSRQRAVFHPQSRQ CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCH MRTGVDEHGAPWIRIMSPAEYEADVTPFFMANPFFEVEIARRIDVLGNMAHVWSLYEART HHCCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHCC APDDATPERRGINSIQLYRDAGGDWRIISMIWDNERPGVQAQPF CCCCCCCHHHCCCEEEEEECCCCCEEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA