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The map label for this gene is exoT [H]

Identifier: 197104612

GI number: 197104612

Start: 1312344

End: 1313918

Strand: Reverse

Name: exoT [H]

Synonym: PHZ_c1146

Alternate gene names: 197104612

Gene position: 1313918-1312344 (Counterclockwise)

Preceding gene: 197104613

Following gene: 197104608

Centisome position: 32.88

GC content: 73.97

Gene sequence:

>1575_bases
GTGGGCCAACACGCGGCCGGCGCCGGCGCCCGGCTCGCTGCGCCTCCTGCGCGGTCCGGACGAGCGGCCGTGAGCCTGGC
GGGCGTGCGCGGCAGGCGCGGGTTCGACCCGGCGGCCCTGGGGGCCCTGGCGCTCAGCGGCTCCAACGTCCTGCGCATGG
GCGTGCAGCTCGCCATGCTGCCGATCCTGGCGCGGCTGGTGGGCCCCTCTGAGTACGGCCTCGTCGCCCTGGCGGTCCCC
TTCGTCTTGTTCTGCAACATGCTGGCCGACGCCGGCATGAGCCAGGCGCTGGCCCGCCGGCAGGAGGTGACGACCGAGCT
GGAGTCCACCGTCTTCTGGCTGGCCGGCGGCCTCGGCCTCGCCCTCTCGGTCTTGGCCTGCGCCCTGGCCTGGCCGCTGG
CCCTGGTGCTGGATCAGCCGCGGCTGCCGTGGCTGATCATGGCCCTCTCGCCCATCCTCGTGATGAGCGGCCTGACCGCC
GTCGCCAACGCCCGGGTGATCCGCGAGGGGCGGTTCGGCGTCTTCGCCGGCGGGGACTTCATCTCCACTGTGGCCTCGGC
CGCGGTCGCCCTGACGGCGGCCCTCAACGGCGCCGGCGCCTGGAGCCTGGTGGCCCAGCAGCTCACCATGTGGGTCTGCA
AGTTCGCCTGGGTGAACCTCAACGCCCGGCCGCGGATCCGCCGCTACTTCCGCCCCTCCGAGGTGCGTGACCTGGTGCGG
TTCGGCGTCCATTCCGTCGGCGCGAACCTGTCGGACTTCGTCTCGCGCAACGTCGACAACCTGATCGTCGGCGGCGTGCT
GGGCACCGTGGCGCTCGGCTACTACGCCATGGCCTACCAGATCGTGCGGGTGCCCGACCTGATCATCTCCGGGCCGCTCT
ATCTCTACGTCTTCACCGCAGTCTCGCGGGCGGCCCACGACGGCGCGCGAGGCAAGGCGGCGGACCTGGCGGTCTCGGCC
CTGCGGCTGGCCTCGTCGGTGCTCGCCCCCACCTTCGTGGGCCTGGCGATCATCTCGCCCCTCGCCGTGGCCCTGGTGCT
GGGCGAGAAGTGGCATGACGCCGCGCCGGTGCTCACCCACCTGACGGCCGCCGGCTTCGGCTTCGCCCACTGCTTCGTCA
TGGGCGCGATCCTGATGGGCCTGGGCCGCTCGCACCTGCAGTTCCGGATGACCGCCCTGGCGGGGGCGACCACCATCGGC
ACGATCGCCGTCACCGCCCGCTTCGGCGTCGAGACCGCCTCGGCGGCGATCGGGAGCGCCATCCTGCTGGTGATGCTGGC
CTATCTCGAGGTGCTGGCCCGCGACTTGCGGATCCCCCGCCGCCGGCTGCTGGGCGCGTTCCTCCCCGGCCTGGCGGGCG
CCGCCGTCATGGCCGGCGCGCTGTTCGCCGCCGAGCCGCTGCTGGCCTCGCTGCCGGACCTGGCGCGGCTCGTGGCGATG
ATCGCCCTGGGCGGGGCCGTCTACGGCGCCGTGGTGCTGGCCCTCGCCCGCGGGCGGCTGATCGACGACGCCAGGCGCTT
CGCCCGCGCGCACGCCAAGGGCGCCGCGCCGTCAGCGGTTCCGGAAGCCGTCTAG

Upstream 100 bases:

>100_bases
GCGCCGCCTTCGGACGGGTGAAGGCGCCCCGCGCCGCGCGCGTCCCCTACCGCTCGCCGAACGTGATCCGGCTCGAGCCC
GTGGACTACTCGGCCGCTGG

Downstream 100 bases:

>100_bases
CTTGGGGATCAGGCCGGCTGCAGCCGGCTGGCCAGGCGCTTCAGCCGCGCCTTCACCGGCATGGCCAGCAACGGCCAGAC
GGCGGGCTCCTGCGCACAGG

Product: polysaccharide transporter, PST family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 524; Mature: 523

Protein sequence:

>524_residues
MGQHAAGAGARLAAPPARSGRAAVSLAGVRGRRGFDPAALGALALSGSNVLRMGVQLAMLPILARLVGPSEYGLVALAVP
FVLFCNMLADAGMSQALARRQEVTTELESTVFWLAGGLGLALSVLACALAWPLALVLDQPRLPWLIMALSPILVMSGLTA
VANARVIREGRFGVFAGGDFISTVASAAVALTAALNGAGAWSLVAQQLTMWVCKFAWVNLNARPRIRRYFRPSEVRDLVR
FGVHSVGANLSDFVSRNVDNLIVGGVLGTVALGYYAMAYQIVRVPDLIISGPLYLYVFTAVSRAAHDGARGKAADLAVSA
LRLASSVLAPTFVGLAIISPLAVALVLGEKWHDAAPVLTHLTAAGFGFAHCFVMGAILMGLGRSHLQFRMTALAGATTIG
TIAVTARFGVETASAAIGSAILLVMLAYLEVLARDLRIPRRRLLGAFLPGLAGAAVMAGALFAAEPLLASLPDLARLVAM
IALGGAVYGAVVLALARGRLIDDARRFARAHAKGAAPSAVPEAV

Sequences:

>Translated_524_residues
MGQHAAGAGARLAAPPARSGRAAVSLAGVRGRRGFDPAALGALALSGSNVLRMGVQLAMLPILARLVGPSEYGLVALAVP
FVLFCNMLADAGMSQALARRQEVTTELESTVFWLAGGLGLALSVLACALAWPLALVLDQPRLPWLIMALSPILVMSGLTA
VANARVIREGRFGVFAGGDFISTVASAAVALTAALNGAGAWSLVAQQLTMWVCKFAWVNLNARPRIRRYFRPSEVRDLVR
FGVHSVGANLSDFVSRNVDNLIVGGVLGTVALGYYAMAYQIVRVPDLIISGPLYLYVFTAVSRAAHDGARGKAADLAVSA
LRLASSVLAPTFVGLAIISPLAVALVLGEKWHDAAPVLTHLTAAGFGFAHCFVMGAILMGLGRSHLQFRMTALAGATTIG
TIAVTARFGVETASAAIGSAILLVMLAYLEVLARDLRIPRRRLLGAFLPGLAGAAVMAGALFAAEPLLASLPDLARLVAM
IALGGAVYGAVVLALARGRLIDDARRFARAHAKGAAPSAVPEAV
>Mature_523_residues
GQHAAGAGARLAAPPARSGRAAVSLAGVRGRRGFDPAALGALALSGSNVLRMGVQLAMLPILARLVGPSEYGLVALAVPF
VLFCNMLADAGMSQALARRQEVTTELESTVFWLAGGLGLALSVLACALAWPLALVLDQPRLPWLIMALSPILVMSGLTAV
ANARVIREGRFGVFAGGDFISTVASAAVALTAALNGAGAWSLVAQQLTMWVCKFAWVNLNARPRIRRYFRPSEVRDLVRF
GVHSVGANLSDFVSRNVDNLIVGGVLGTVALGYYAMAYQIVRVPDLIISGPLYLYVFTAVSRAAHDGARGKAADLAVSAL
RLASSVLAPTFVGLAIISPLAVALVLGEKWHDAAPVLTHLTAAGFGFAHCFVMGAILMGLGRSHLQFRMTALAGATTIGT
IAVTARFGVETASAAIGSAILLVMLAYLEVLARDLRIPRRRLLGAFLPGLAGAAVMAGALFAAEPLLASLPDLARLVAMI
ALGGAVYGAVVLALARGRLIDDARRFARAHAKGAAPSAVPEAV

Specific function: Lipopolysaccharide biosynthesis. [C]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

Organism=Escherichia coli, GI1788359, Length=368, Percent_Identity=24.4565217391304, Blast_Score=95, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002797 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 54286; Mature: 54155

Theoretical pI: Translated: 11.19; Mature: 11.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQHAAGAGARLAAPPARSGRAAVSLAGVRGRRGFDPAALGALALSGSNVLRMGVQLAML
CCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
PILARLVGPSEYGLVALAVPFVLFCNMLADAGMSQALARRQEVTTELESTVFWLAGGLGL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSVLACALAWPLALVLDQPRLPWLIMALSPILVMSGLTAVANARVIREGRFGVFAGGDF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH
ISTVASAAVALTAALNGAGAWSLVAQQLTMWVCKFAWVNLNARPRIRRYFRPSEVRDLVR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH
FGVHSVGANLSDFVSRNVDNLIVGGVLGTVALGYYAMAYQIVRVPDLIISGPLYLYVFTA
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VSRAAHDGARGKAADLAVSALRLASSVLAPTFVGLAIISPLAVALVLGEKWHDAAPVLTH
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LTAAGFGFAHCFVMGAILMGLGRSHLQFRMTALAGATTIGTIAVTARFGVETASAAIGSA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHEEHHHCCHHHHHHHHHH
ILLVMLAYLEVLARDLRIPRRRLLGAFLPGLAGAAVMAGALFAAEPLLASLPDLARLVAM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IALGGAVYGAVVLALARGRLIDDARRFARAHAKGAAPSAVPEAV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
GQHAAGAGARLAAPPARSGRAAVSLAGVRGRRGFDPAALGALALSGSNVLRMGVQLAML
CCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH
PILARLVGPSEYGLVALAVPFVLFCNMLADAGMSQALARRQEVTTELESTVFWLAGGLGL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALSVLACALAWPLALVLDQPRLPWLIMALSPILVMSGLTAVANARVIREGRFGVFAGGDF
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHH
ISTVASAAVALTAALNGAGAWSLVAQQLTMWVCKFAWVNLNARPRIRRYFRPSEVRDLVR
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH
FGVHSVGANLSDFVSRNVDNLIVGGVLGTVALGYYAMAYQIVRVPDLIISGPLYLYVFTA
HHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
VSRAAHDGARGKAADLAVSALRLASSVLAPTFVGLAIISPLAVALVLGEKWHDAAPVLTH
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
LTAAGFGFAHCFVMGAILMGLGRSHLQFRMTALAGATTIGTIAVTARFGVETASAAIGSA
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHEEHHHCCHHHHHHHHHH
ILLVMLAYLEVLARDLRIPRRRLLGAFLPGLAGAAVMAGALFAAEPLLASLPDLARLVAM
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IALGGAVYGAVVLALARGRLIDDARRFARAHAKGAAPSAVPEAV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8226645; 8226646; 8118055; 11481431 [H]