| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is exoL [H]
Identifier: 197104609
GI number: 197104609
Start: 1308835
End: 1310022
Strand: Direct
Name: exoL [H]
Synonym: PHZ_c1143
Alternate gene names: 197104609
Gene position: 1308835-1310022 (Clockwise)
Preceding gene: 197104607
Following gene: 197104610
Centisome position: 32.75
GC content: 72.39
Gene sequence:
>1188_bases GTGAAGCTGGCCTACTTCGTCCACGACCTGACCGATCCGGCCGTCACCCGACGGGTTCGGATGCTGAAGGCCGGCGGGGC CGAGCCGGTGGTGCTGGGCTTCCGGCGCGCGGACGCCGCGCCCGAGGCCCTGGAAGGCTGCGCCACGGTGGACCTGGGCC GGACCTACGACGCGCGCCTCGGCCACCGCGCCCGGCTGACGGCCCTGGCCGCGCTGCGCTCGGGACGGTTCCGCAAGCTG CTGGAAGGCGCCGAGGTTGTGCTCTGCCGCCAGCTCGAGATGCTGGCGGTGGGCGAGGCGGCCCGCTGGACCTGCGGCCT GAAGGCGAAGCTGGCCTACGAGGCGCTCGACATCCACCGGATCATGCTGGCGGACGCCGGCAAGGGCCGGGCCATGCGGG CCGTCGAGAAGGCGCTGCTGAGGCGGTCGGACCTGCTGATCGTCAGCTCGCCGGCGTTCGTGGACTCCTACTTCGCACCG GTGCAGGGCCTGGGGCGCGACCTGCGCACCCCCGTCATGCTGGTCGAGAACAAGGTGCTGGAGCTGGAGGGGGCGGGCGG CGCGCCGCTGGGACCGCCCCCGGCCGGGCCCCCCTGGCGCATCGGCTGGCTGGGCGCGATCCGCTGCCGGCGGAGCCTCG ACATCCTGACCGGGCTGGCGCAGCGCCGCCCCGACCTGCTGGAGGTGCGGATCTGGGGGCGGCCGGCCCATGTGGAGTTC GCCGACTTCGACGGCCAGGTGGCGGCCACGCCCAACGTGAGCTTCGGCGGCCCCTACCGGGCGGCGGACCTGCCGCTGCT GTACGGCCAGACGCACTTCAGCTGGGCCATCGACTTCATGGAGGAGGGGCTGAACTCGTCCTGGCTGCTGCCCAACCGGA TCTACGAAAGCGGCCGCTACGGCTCGGTCCCCGTCGCTCTATCGGGCGTGCAGACCGGCCGCTGGCTGGCGGAACACAGC TTCGGCGTGCGCCTCTCGCGGCCGGAGGATCTGGAGGGCTTCCTGGAGGGGCTCACGCCCGAGCGCTACGCGGCGTTACG GCGCGAGCTGGAGGCGCAGCCCCGCTCTGCGTTCGTGGCCGACGCCGGCGACTGCCGCCGCTTGACGGAAGGGTTGAGAA ACCCGCAACCGGCCCTTGGTTCCAACGGCCAAGCTATTGATTCCGCATCATCAAAATTGGCGGCCTAG
Upstream 100 bases:
>100_bases CTGGAACACCCCTCCGCAACTGCAAGGCTGCCGCGGTTCCAAACGGGCCGTCGCGCGTTTGGTTCGCATCCACACGCTTC AGCTTTGAGGGGGCGCGCAC
Downstream 100 bases:
>100_bases ACCCGCAGCGGGGCCGGAACGGAATCCCGGGCGCATGGTTTAAGCCGCGTCGACCGCGGAGCTTTCCGCGCGGTCGGCTC TGGTCGAATTTCTCGGATGC
Product: succinoglycan biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MKLAYFVHDLTDPAVTRRVRMLKAGGAEPVVLGFRRADAAPEALEGCATVDLGRTYDARLGHRARLTALAALRSGRFRKL LEGAEVVLCRQLEMLAVGEAARWTCGLKAKLAYEALDIHRIMLADAGKGRAMRAVEKALLRRSDLLIVSSPAFVDSYFAP VQGLGRDLRTPVMLVENKVLELEGAGGAPLGPPPAGPPWRIGWLGAIRCRRSLDILTGLAQRRPDLLEVRIWGRPAHVEF ADFDGQVAATPNVSFGGPYRAADLPLLYGQTHFSWAIDFMEEGLNSSWLLPNRIYESGRYGSVPVALSGVQTGRWLAEHS FGVRLSRPEDLEGFLEGLTPERYAALRRELEAQPRSAFVADAGDCRRLTEGLRNPQPALGSNGQAIDSASSKLAA
Sequences:
>Translated_395_residues MKLAYFVHDLTDPAVTRRVRMLKAGGAEPVVLGFRRADAAPEALEGCATVDLGRTYDARLGHRARLTALAALRSGRFRKL LEGAEVVLCRQLEMLAVGEAARWTCGLKAKLAYEALDIHRIMLADAGKGRAMRAVEKALLRRSDLLIVSSPAFVDSYFAP VQGLGRDLRTPVMLVENKVLELEGAGGAPLGPPPAGPPWRIGWLGAIRCRRSLDILTGLAQRRPDLLEVRIWGRPAHVEF ADFDGQVAATPNVSFGGPYRAADLPLLYGQTHFSWAIDFMEEGLNSSWLLPNRIYESGRYGSVPVALSGVQTGRWLAEHS FGVRLSRPEDLEGFLEGLTPERYAALRRELEAQPRSAFVADAGDCRRLTEGLRNPQPALGSNGQAIDSASSKLAA >Mature_395_residues MKLAYFVHDLTDPAVTRRVRMLKAGGAEPVVLGFRRADAAPEALEGCATVDLGRTYDARLGHRARLTALAALRSGRFRKL LEGAEVVLCRQLEMLAVGEAARWTCGLKAKLAYEALDIHRIMLADAGKGRAMRAVEKALLRRSDLLIVSSPAFVDSYFAP VQGLGRDLRTPVMLVENKVLELEGAGGAPLGPPPAGPPWRIGWLGAIRCRRSLDILTGLAQRRPDLLEVRIWGRPAHVEF ADFDGQVAATPNVSFGGPYRAADLPLLYGQTHFSWAIDFMEEGLNSSWLLPNRIYESGRYGSVPVALSGVQTGRWLAEHS FGVRLSRPEDLEGFLEGLTPERYAALRRELEAQPRSAFVADAGDCRRLTEGLRNPQPALGSNGQAIDSASSKLAA
Specific function: Essential for succinoglycan (EPS I) synthesis and nodule infection. Glycosyltransferase needed for the addition of the third sugar (glucose), catalyzes the formation of a beta-1,4 linkage between the second and third sugars [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43028; Mature: 43028
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLAYFVHDLTDPAVTRRVRMLKAGGAEPVVLGFRRADAAPEALEGCATVDLGRTYDARL CEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHCCEEEECCCCHHHHC GHRARLTALAALRSGRFRKLLEGAEVVLCRQLEMLAVGEAARWTCGLKAKLAYEALDIHR CCHHHHHHHHHHHCCHHHHHHCCHHEEHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHEE IMLADAGKGRAMRAVEKALLRRSDLLIVSSPAFVDSYFAPVQGLGRDLRTPVMLVENKVL EEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHCCCEEEECCEEE ELEGAGGAPLGPPPAGPPWRIGWLGAIRCRRSLDILTGLAQRRPDLLEVRIWGRPAHVEF EEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE ADFDGQVAATPNVSFGGPYRAADLPLLYGQTHFSWAIDFMEEGLNSSWLLPNRIYESGRY ECCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC GSVPVALSGVQTGRWLAEHSFGVRLSRPEDLEGFLEGLTPERYAALRRELEAQPRSAFVA CCCCEEEECCCCCCHHHHCCCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEE DAGDCRRLTEGLRNPQPALGSNGQAIDSASSKLAA CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC >Mature Secondary Structure MKLAYFVHDLTDPAVTRRVRMLKAGGAEPVVLGFRRADAAPEALEGCATVDLGRTYDARL CEEEEEEHHCCCHHHHHHHHHHHCCCCCEEEEEEHHCCCCHHHHHCCEEEECCCCHHHHC GHRARLTALAALRSGRFRKLLEGAEVVLCRQLEMLAVGEAARWTCGLKAKLAYEALDIHR CCHHHHHHHHHHHCCHHHHHHCCHHEEHHHHHHHHHCCCCHHEECCCHHHHHHHHHHHEE IMLADAGKGRAMRAVEKALLRRSDLLIVSSPAFVDSYFAPVQGLGRDLRTPVMLVENKVL EEEECCCCCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCHHHCCCEEEECCEEE ELEGAGGAPLGPPPAGPPWRIGWLGAIRCRRSLDILTGLAQRRPDLLEVRIWGRPAHVEF EEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEE ADFDGQVAATPNVSFGGPYRAADLPLLYGQTHFSWAIDFMEEGLNSSWLLPNRIYESGRY ECCCCEEEECCCCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC GSVPVALSGVQTGRWLAEHSFGVRLSRPEDLEGFLEGLTPERYAALRRELEAQPRSAFVA CCCCEEEECCCCCCHHHHCCCCEEECCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEE DAGDCRRLTEGLRNPQPALGSNGQAIDSASSKLAA CCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8226645; 8479421; 11481431; 8246891 [H]