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The map label for this gene is 197104579

Identifier: 197104579

GI number: 197104579

Start: 1270121

End: 1270735

Strand: Direct

Name: 197104579

Synonym: PHZ_c1113

Alternate gene names: NA

Gene position: 1270121-1270735 (Clockwise)

Preceding gene: 197104576

Following gene: 197104580

Centisome position: 31.78

GC content: 73.98

Gene sequence:

>615_bases
GTGTTCAACGCGCCCTGGACGGTGCTGCTGCTGACCGCGGTGATCGTCGGCGGTTACGCCGTGCAGAGCCGGTTTCCGCT
GTCCTCGGTGGCGATGTCGTTCGCGTTCTCGCCGGCCCTCCTCGTGGAAGGCCAGTGGGAGCGGCTGTTCACCTCGCTCT
TCCTGCACGGCAACTGGGCGCACGCGCTGATGAACGCCGGCTTCGGCCTGGCCTTCGGCACGCCGGTGGCGCGCTGGTTC
GGCGAGCGGCTGGGCGGGGCGGCGCTGTTCTTCGCCTTCTATCTGGTGTGCGGCGCGCTCTCGGGCCTGGGCTATGCGGC
GCTGCATCCGGGCGAGCAGAGCGCGCTGGTCGGCGCCTCCGGGGCGGTCTCGGGCCTGATGGGCGGGGCCGCGCGGCTGA
TGGCCGGCCACGGGCGGCCGGGACCGATCCTGTCGCGCACGGTGCTGGGGATGGGCGCCATCTGGGCGGCGATCAACCTG
GCGATCGGCCTGGTGGGGGCGGGGCTGCTGCCCGGAACCGAGGGCGCGGCCGTCGCCTGGGAGGCGCACATCGCCGGCTT
CGTCGCCGGCGTCCTGCTGTTCGGGCCCTTCGCCCGGATGGGGCGGCGCGCCTGA

Upstream 100 bases:

>100_bases
GGAGCCGATGAACGCCGCACTGTTCGAAGCGCCGGCGGACGGAGGTCCGCGCCTGCCGCCCCATCGGGAGCAGCCGGAGT
ACCGCCGCAAGCCCGAGCCG

Downstream 100 bases:

>100_bases
ACGGCGTCGAGAACGGCGTCTAGCGCGGCCGCTTCACGCGTGCGTGACACGCGCGCGCCTTCCATTGAATCCCCGGACGT
TCTGCGCAACGCTGTTCTTT

Product: rhomboid family protein

Products: NA

Alternate protein names: Peptidase; Rhomboid Serine Protease

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MFNAPWTVLLLTAVIVGGYAVQSRFPLSSVAMSFAFSPALLVEGQWERLFTSLFLHGNWAHALMNAGFGLAFGTPVARWF
GERLGGAALFFAFYLVCGALSGLGYAALHPGEQSALVGASGAVSGLMGGAARLMAGHGRPGPILSRTVLGMGAIWAAINL
AIGLVGAGLLPGTEGAAVAWEAHIAGFVAGVLLFGPFARMGRRA

Sequences:

>Translated_204_residues
MFNAPWTVLLLTAVIVGGYAVQSRFPLSSVAMSFAFSPALLVEGQWERLFTSLFLHGNWAHALMNAGFGLAFGTPVARWF
GERLGGAALFFAFYLVCGALSGLGYAALHPGEQSALVGASGAVSGLMGGAARLMAGHGRPGPILSRTVLGMGAIWAAINL
AIGLVGAGLLPGTEGAAVAWEAHIAGFVAGVLLFGPFARMGRRA
>Mature_204_residues
MFNAPWTVLLLTAVIVGGYAVQSRFPLSSVAMSFAFSPALLVEGQWERLFTSLFLHGNWAHALMNAGFGLAFGTPVARWF
GERLGGAALFFAFYLVCGALSGLGYAALHPGEQSALVGASGAVSGLMGGAARLMAGHGRPGPILSRTVLGMGAIWAAINL
AIGLVGAGLLPGTEGAAVAWEAHIAGFVAGVLLFGPFARMGRRA

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20932; Mature: 20932

Theoretical pI: Translated: 10.37; Mature: 10.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFNAPWTVLLLTAVIVGGYAVQSRFPLSSVAMSFAFSPALLVEGQWERLFTSLFLHGNWA
CCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHEECCCHHHHHHHHHHCCCHH
HALMNAGFGLAFGTPVARWFGERLGGAALFFAFYLVCGALSGLGYAALHPGEQSALVGAS
HHHHHCCCCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCC
GAVSGLMGGAARLMAGHGRPGPILSRTVLGMGAIWAAINLAIGLVGAGLLPGTEGAAVAW
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH
EAHIAGFVAGVLLFGPFARMGRRA
HHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFNAPWTVLLLTAVIVGGYAVQSRFPLSSVAMSFAFSPALLVEGQWERLFTSLFLHGNWA
CCCCHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHCCCHHEECCCHHHHHHHHHHCCCHH
HALMNAGFGLAFGTPVARWFGERLGGAALFFAFYLVCGALSGLGYAALHPGEQSALVGAS
HHHHHCCCCCHHCCHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCEEEECCCCCCCEECCC
GAVSGLMGGAARLMAGHGRPGPILSRTVLGMGAIWAAINLAIGLVGAGLLPGTEGAAVAW
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHH
EAHIAGFVAGVLLFGPFARMGRRA
HHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA