Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is paaY [C]

Identifier: 197104573

GI number: 197104573

Start: 1262212

End: 1262742

Strand: Direct

Name: paaY [C]

Synonym: PHZ_c1107

Alternate gene names: 197104573

Gene position: 1262212-1262742 (Clockwise)

Preceding gene: 197104570

Following gene: 197104574

Centisome position: 31.58

GC content: 62.9

Gene sequence:

>531_bases
ATGAGTGTCTACAACTTAGGCAATGTGACGCCGCAATTACCAAACGATGACGAATACTGGATTGCGCCGACGGCCGCCGT
GATGGGCAATGTGATTCTCAAGAAGAACGCGTCCGTCTGGTGGGGTGCAACCCTGCGTGGCGACAACGACCCGATCATCA
TCGGCGAGAACTCGAACGTGCAGGACGGCAGCGTCCTGCACACCGACCTGGGCTCGCCGCTCACCATCGGGGCGAACGTC
ACCGTGGGCCACATGGTGATGCTCCACGGCTGCTCGATCGGGGACAACACCCTGGTGGGCATCGGCTCGATCGTCCTGAA
CGGAGCGAAGATCGGGAAGAACTGCCTGATCGGCGCCAACTGCCTGATCACCGAGGGCAAGGAGATCCCCGACAACTCGC
TGGTCATGGGCGCGCCGGGCAAGGTGGTGCGGGAGGTGAGCGAGCAGCAGGCGATGGTCATGGCCGCCGGCGCCCACCAC
TACGTCGAGAACTGGAAGCGCTACCGGCGGGAGCTGACGGAATTCCGGTGA

Upstream 100 bases:

>100_bases
GGGAGGACTTCCGTCCTCTCGAATCGCCCGACTAGAATGATCGTAACGCCCTTTCCGAGTCGTTAAACGCCCCATCGGCG
GCAAGAAATAAGGCAGCGAG

Downstream 100 bases:

>100_bases
CGCGGCTGGTCGCCGCCCTCCAGGGCGCCTGCGTGGCCGAACCCGCGCCTTGACGGACGTGGCGGCGCCCCTCCCTTGAT
GCCCGCAAGGCACAAGGGAG

Product: acetyltransferase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSVYNLGNVTPQLPNDDEYWIAPTAAVMGNVILKKNASVWWGATLRGDNDPIIIGENSNVQDGSVLHTDLGSPLTIGANV
TVGHMVMLHGCSIGDNTLVGIGSIVLNGAKIGKNCLIGANCLITEGKEIPDNSLVMGAPGKVVREVSEQQAMVMAAGAHH
YVENWKRYRRELTEFR

Sequences:

>Translated_176_residues
MSVYNLGNVTPQLPNDDEYWIAPTAAVMGNVILKKNASVWWGATLRGDNDPIIIGENSNVQDGSVLHTDLGSPLTIGANV
TVGHMVMLHGCSIGDNTLVGIGSIVLNGAKIGKNCLIGANCLITEGKEIPDNSLVMGAPGKVVREVSEQQAMVMAAGAHH
YVENWKRYRRELTEFR
>Mature_175_residues
SVYNLGNVTPQLPNDDEYWIAPTAAVMGNVILKKNASVWWGATLRGDNDPIIIGENSNVQDGSVLHTDLGSPLTIGANVT
VGHMVMLHGCSIGDNTLVGIGSIVLNGAKIGKNCLIGANCLITEGKEIPDNSLVMGAPGKVVREVSEQQAMVMAAGAHHY
VENWKRYRRELTEFR

Specific function: Phenylacetic acid aerobic catabolism. [C]

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI1787667, Length=174, Percent_Identity=36.2068965517241, Blast_Score=125, Evalue=2e-30,
Organism=Escherichia coli, GI87082240, Length=153, Percent_Identity=40.5228758169935, Blast_Score=117, Evalue=6e-28,
Organism=Escherichia coli, GI87081681, Length=150, Percent_Identity=32, Blast_Score=94, Evalue=7e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18896; Mature: 18765

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVYNLGNVTPQLPNDDEYWIAPTAAVMGNVILKKNASVWWGATLRGDNDPIIIGENSNV
CCEECCCCCCCCCCCCCCEEEEEHHHHHCCEEEECCCCEEEEEEEECCCCCEEECCCCCC
QDGSVLHTDLGSPLTIGANVTVGHMVMLHGCSIGDNTLVGIGSIVLNGAKIGKNCLIGAN
CCCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCEEEEHHHEECCCCCCCCEEECCE
CLITEGKEIPDNSLVMGAPGKVVREVSEQQAMVMAAGAHHYVENWKRYRRELTEFR
EEEECCCCCCCCCEEECCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SVYNLGNVTPQLPNDDEYWIAPTAAVMGNVILKKNASVWWGATLRGDNDPIIIGENSNV
CEECCCCCCCCCCCCCCEEEEEHHHHHCCEEEECCCCEEEEEEEECCCCCEEECCCCCC
QDGSVLHTDLGSPLTIGANVTVGHMVMLHGCSIGDNTLVGIGSIVLNGAKIGKNCLIGAN
CCCCEEEECCCCCEEECCCCCCCEEEEEECCCCCCCCEEEEHHHEECCCCCCCCEEECCE
CLITEGKEIPDNSLVMGAPGKVVREVSEQQAMVMAAGAHHYVENWKRYRRELTEFR
EEEECCCCCCCCCEEECCCHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]