| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is phoH [H]
Identifier: 197104572
GI number: 197104572
Start: 1261133
End: 1261897
Strand: Reverse
Name: phoH [H]
Synonym: PHZ_c1106
Alternate gene names: 197104572
Gene position: 1261897-1261133 (Counterclockwise)
Preceding gene: 197104577
Following gene: 197104571
Centisome position: 31.58
GC content: 69.93
Gene sequence:
>765_bases ATGAGCAAGCGAGCCCTGAAGCGACAGCTGCGCGAAGGCGCGTTCGACGCCGGTCAGTTCGAGGGGGACGATAAGATCCG CCGGCTGCCGCTCGACCGGGGCTGGTCGCCGCTCGCCCACCACAACGACGACCGCGACCAGGCCTACCTCAAGACCATCA AGGCCAAGTCGCCGGGCCAGCAGCAGCTGATCGAGGCCATCGATTCCAAGAACCTCGTCATGGCGCTCGGTCCCGCCGGC ACCGGCAAGACCTACCTCGCCATCGCCAAGGCGGTGGAGGCGCTGGAGAGCGGCCGCGTCGGCCGCATCGTGCTCTCGCG CCCCGCGGTCGAGGCCGGCGAGTCCATCGGCTTCCTGCCCGGCGACGCCGAGGACAAGCTCGCCCCCTACCTGCGGCCGC TCTACGACGCCCTGTCCGACCGGCTGTCGATGAAGCGGGTCCGGGCCCTGATGGCCGAGGGCGCCATCGAGATCGCCCCC GTCGGCTTCATGCGCGGCCGCACGCTGAACAACGCCTTCGTGGTGATCGACGAGGCGCAGAACTGCACCTACGTGCAGCT CAAGATGCTGCTCACCCGCCTCGGCTGGCATTCGACGATGGTCGTGACGGGCGATCCCAACCAGTCCGACCTGCTGCCCG AGCTGTCCGGCCTCGGCGGCGTCGCCGACCGCCTGGAGGAGCTGGGCAATGTCGCGGTGGTCCGGCTGGCCGAGCGCGAC ATCGTCCGCCACCCGCTGGTGGCCGAGATGCTGGGCGTCCTCTGA
Upstream 100 bases:
>100_bases CCCCGGGCTCCGCACGCCGCCGCTCCCGCCGTCACCTGATCACCGAAGGGCGCTCCCGCATCCGGGACGCCCTTTTTTCT TGCCCCCAACGGAGGCCTTG
Downstream 100 bases:
>100_bases TCGGGGCCGGGACGGCGCCCCAGCCGACGCTCTAGTCGCAGGGCGCCGTCTCTCCCGAGCCCAGGTCGATCCGGAAGCAC TGGCGCTCGCCGGTGTCGCA
Product: predicted phosphate starvation-inducible protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSKRALKRQLREGAFDAGQFEGDDKIRRLPLDRGWSPLAHHNDDRDQAYLKTIKAKSPGQQQLIEAIDSKNLVMALGPAG TGKTYLAIAKAVEALESGRVGRIVLSRPAVEAGESIGFLPGDAEDKLAPYLRPLYDALSDRLSMKRVRALMAEGAIEIAP VGFMRGRTLNNAFVVIDEAQNCTYVQLKMLLTRLGWHSTMVVTGDPNQSDLLPELSGLGGVADRLEELGNVAVVRLAERD IVRHPLVAEMLGVL
Sequences:
>Translated_254_residues MSKRALKRQLREGAFDAGQFEGDDKIRRLPLDRGWSPLAHHNDDRDQAYLKTIKAKSPGQQQLIEAIDSKNLVMALGPAG TGKTYLAIAKAVEALESGRVGRIVLSRPAVEAGESIGFLPGDAEDKLAPYLRPLYDALSDRLSMKRVRALMAEGAIEIAP VGFMRGRTLNNAFVVIDEAQNCTYVQLKMLLTRLGWHSTMVVTGDPNQSDLLPELSGLGGVADRLEELGNVAVVRLAERD IVRHPLVAEMLGVL >Mature_253_residues SKRALKRQLREGAFDAGQFEGDDKIRRLPLDRGWSPLAHHNDDRDQAYLKTIKAKSPGQQQLIEAIDSKNLVMALGPAGT GKTYLAIAKAVEALESGRVGRIVLSRPAVEAGESIGFLPGDAEDKLAPYLRPLYDALSDRLSMKRVRALMAEGAIEIAPV GFMRGRTLNNAFVVIDEAQNCTYVQLKMLLTRLGWHSTMVVTGDPNQSDLLPELSGLGGVADRLEELGNVAVVRLAERDI VRHPLVAEMLGVL
Specific function: Unknown
COG id: COG1702
COG function: function code T; Phosphate starvation-inducible protein PhoH, predicted ATPase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoH family [H]
Homologues:
Organism=Escherichia coli, GI145693103, Length=201, Percent_Identity=49.2537313432836, Blast_Score=187, Evalue=4e-49, Organism=Escherichia coli, GI1787257, Length=254, Percent_Identity=41.7322834645669, Blast_Score=179, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003714 [H]
Pfam domain/function: PF02562 PhoH [H]
EC number: NA
Molecular weight: Translated: 27733; Mature: 27602
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRALKRQLREGAFDAGQFEGDDKIRRLPLDRGWSPLAHHNDDRDQAYLKTIKAKSPGQ CCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH QQLIEAIDSKNLVMALGPAGTGKTYLAIAKAVEALESGRVGRIVLSRPAVEAGESIGFLP HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCC GDAEDKLAPYLRPLYDALSDRLSMKRVRALMAEGAIEIAPVGFMRGRTLNNAFVVIDEAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCEEEEEECCC NCTYVQLKMLLTRLGWHSTMVVTGDPNQSDLLPELSGLGGVADRLEELGNVAVVRLAERD CCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEHHHH IVRHPLVAEMLGVL HHHCCHHHHHHHCC >Mature Secondary Structure SKRALKRQLREGAFDAGQFEGDDKIRRLPLDRGWSPLAHHNDDRDQAYLKTIKAKSPGQ CHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCH QQLIEAIDSKNLVMALGPAGTGKTYLAIAKAVEALESGRVGRIVLSRPAVEAGESIGFLP HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCHHCCCCCCCCC GDAEDKLAPYLRPLYDALSDRLSMKRVRALMAEGAIEIAPVGFMRGRTLNNAFVVIDEAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCEEEEEECCC NCTYVQLKMLLTRLGWHSTMVVTGDPNQSDLLPELSGLGGVADRLEELGNVAVVRLAERD CCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHCCEEEEEEHHHH IVRHPLVAEMLGVL HHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]