| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is sbp [H]
Identifier: 197104567
GI number: 197104567
Start: 1251986
End: 1253050
Strand: Direct
Name: sbp [H]
Synonym: PHZ_c1101
Alternate gene names: 197104567
Gene position: 1251986-1253050 (Clockwise)
Preceding gene: 197104566
Following gene: 197104568
Centisome position: 31.33
GC content: 69.58
Gene sequence:
>1065_bases ATGACCCAGACGGAATTCTCTCGTCGCCGCCTGCTCAAGGTGGGAGCCGCAGGCGCTGCGGCGGCTGGGACTGCGCCGCT CCTCCTCCCCGGGGCGGCGCAGGCCCAGTCAAGAGCGAGTACGGCAAGGGCCAGCCAGCTCACCCTGCTGAACGTCAGCT ACGATCCGACGCGTGAGCTCTACAAGGACATCAACGCCGCCTTCGCCGCCTACTGGAAGGGGCGGACGGGCCAGACGCTG ACGATCAACCAGAGCCACGGCGGCTCGGGCCGGCAGGCCCGGGCGGTGATCGACGGGCTGCAGGCCGACGTGGTGACGCT GGCGCTCGCCTACGACATCGACGAGATCGCCGCGCGGGCCAAGCTGCTGCCGGCCAACTGGCAGAGCCGCCTGCCGCAGA ACTCCGCGCCCTACACCTCGACCATCGTGTTCCTGGTGCGGAAGGGGAACCCGTGGAAGATCCGCGACTGGGGCGACCTC GCCAGGCCCGGCGTGGCGGTGATCACGCCCAATCCGAAGACCTCGGGCGGCGCGCGCTGGAACCACCTGGCGGCCTACGC CTGGGCGCTGAAGCAGCCGGGGGGCACGCCGCAGACGGCGCAGGCCTTCCTGGCGCGGCTCTACAAGAACGTGCCGGTGC TGGACACCGGGGCGCGGGGCTCGACCACGACCTTCGCCGAGCGCGGCATCGGCGACGTCCTGCTGGCCTGGGAGAACGAG GCCTTCCTGTCGCAGGCCGAGTTCGGGAACAGGTTCGACATCGTCTATCCGAGCCTGTCGATCCTGGCTGAGCCCACGGT GGCGCTGGTGGACCGCAACGTCGACCGGCGGAAGACCCGCATCCAGGCCGAGGGCTATCTGAACTTCCTCTACAGCCCGC TGGCGCAGGACCTGATCGGCAAGAACCACTACCGGCCCCGCAACGCCGAGGCGCTCGCCAAGTACCGCTCGAAGTTCAAG GACATCCCCCTCGTCACCATCGACGGCCAGTTCGGCGGCTGGCGGAAGGCGCAGGCCGAGCATTTCGCCGACGGCGGGAT CTTCGACCGGATCTACCGGCGCTGA
Upstream 100 bases:
>100_bases GCGCCCAGGTGGGCCAGGACCTGAACATCTGGTCCCTCCGCACCCAGTACGCCTTCTGACCCAAACCCCAGACCCAATCC TTCAGACCGGATCACCGATC
Downstream 100 bases:
>100_bases CATGACGGCCGCCGCGGCGATCGCCGCCCCCAAGCCCCGCCGGCGCTGGAAGGAGCCCAGCATCCTGCCGGGGTTCCCGC TCGCCATGGGCTGGACGCTG
Product: sulfate-binding protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Sulfate starvation-induced protein 2; SSI2 [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MTQTEFSRRRLLKVGAAGAAAAGTAPLLLPGAAQAQSRASTARASQLTLLNVSYDPTRELYKDINAAFAAYWKGRTGQTL TINQSHGGSGRQARAVIDGLQADVVTLALAYDIDEIAARAKLLPANWQSRLPQNSAPYTSTIVFLVRKGNPWKIRDWGDL ARPGVAVITPNPKTSGGARWNHLAAYAWALKQPGGTPQTAQAFLARLYKNVPVLDTGARGSTTTFAERGIGDVLLAWENE AFLSQAEFGNRFDIVYPSLSILAEPTVALVDRNVDRRKTRIQAEGYLNFLYSPLAQDLIGKNHYRPRNAEALAKYRSKFK DIPLVTIDGQFGGWRKAQAEHFADGGIFDRIYRR
Sequences:
>Translated_354_residues MTQTEFSRRRLLKVGAAGAAAAGTAPLLLPGAAQAQSRASTARASQLTLLNVSYDPTRELYKDINAAFAAYWKGRTGQTL TINQSHGGSGRQARAVIDGLQADVVTLALAYDIDEIAARAKLLPANWQSRLPQNSAPYTSTIVFLVRKGNPWKIRDWGDL ARPGVAVITPNPKTSGGARWNHLAAYAWALKQPGGTPQTAQAFLARLYKNVPVLDTGARGSTTTFAERGIGDVLLAWENE AFLSQAEFGNRFDIVYPSLSILAEPTVALVDRNVDRRKTRIQAEGYLNFLYSPLAQDLIGKNHYRPRNAEALAKYRSKFK DIPLVTIDGQFGGWRKAQAEHFADGGIFDRIYRR >Mature_353_residues TQTEFSRRRLLKVGAAGAAAAGTAPLLLPGAAQAQSRASTARASQLTLLNVSYDPTRELYKDINAAFAAYWKGRTGQTLT INQSHGGSGRQARAVIDGLQADVVTLALAYDIDEIAARAKLLPANWQSRLPQNSAPYTSTIVFLVRKGNPWKIRDWGDLA RPGVAVITPNPKTSGGARWNHLAAYAWALKQPGGTPQTAQAFLARLYKNVPVLDTGARGSTTTFAERGIGDVLLAWENEA FLSQAEFGNRFDIVYPSLSILAEPTVALVDRNVDRRKTRIQAEGYLNFLYSPLAQDLIGKNHYRPRNAEALAKYRSKFKD IPLVTIDGQFGGWRKAQAEHFADGGIFDRIYRR
Specific function: This protein specifically binds sulfate and is involved in its transmembrane transport [H]
COG id: COG1613
COG function: function code P; ABC-type sulfate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic sulfate-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI1790351, Length=317, Percent_Identity=61.198738170347, Blast_Score=404, Evalue=1e-114, Organism=Escherichia coli, GI1788765, Length=305, Percent_Identity=47.5409836065574, Blast_Score=282, Evalue=2e-77,
Paralogues:
None
Copy number: 1240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 - InterPro: IPR000957 - InterPro: IPR005669 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 38814; Mature: 38683
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: PS00757 PROK_SULFATE_BIND_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTEFSRRRLLKVGAAGAAAAGTAPLLLPGAAQAQSRASTARASQLTLLNVSYDPTREL CCCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCEEEEEEECCCCHHHH YKDINAAFAAYWKGRTGQTLTINQSHGGSGRQARAVIDGLQADVVTLALAYDIDEIAARA HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH KLLPANWQSRLPQNSAPYTSTIVFLVRKGNPWKIRDWGDLARPGVAVITPNPKTSGGARW HCCCCCHHHHCCCCCCCCCEEEEEEEECCCCEEECCCHHHCCCCEEEECCCCCCCCCCCH NHLAAYAWALKQPGGTPQTAQAFLARLYKNVPVLDTGARGSTTTFAERGIGDVLLAWENE HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCCEEEEECCH AFLSQAEFGNRFDIVYPSLSILAEPTVALVDRNVDRRKTRIQAEGYLNFLYSPLAQDLIG HHHHHHHCCCEEEEECCCHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC KNHYRPRNAEALAKYRSKFKDIPLVTIDGQFGGWRKAQAEHFADGGIFDRIYRR CCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHCC >Mature Secondary Structure TQTEFSRRRLLKVGAAGAAAAGTAPLLLPGAAQAQSRASTARASQLTLLNVSYDPTREL CCCHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHCEEEEEEECCCCHHHH YKDINAAFAAYWKGRTGQTLTINQSHGGSGRQARAVIDGLQADVVTLALAYDIDEIAARA HHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHH KLLPANWQSRLPQNSAPYTSTIVFLVRKGNPWKIRDWGDLARPGVAVITPNPKTSGGARW HCCCCCHHHHCCCCCCCCCEEEEEEEECCCCEEECCCHHHCCCCEEEECCCCCCCCCCCH NHLAAYAWALKQPGGTPQTAQAFLARLYKNVPVLDTGARGSTTTFAERGIGDVLLAWENE HHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHHHCCCCCEEEEECCH AFLSQAEFGNRFDIVYPSLSILAEPTVALVDRNVDRRKTRIQAEGYLNFLYSPLAQDLIG HHHHHHHCCCEEEEECCCHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC KNHYRPRNAEALAKYRSKFKDIPLVTIDGQFGGWRKAQAEHFADGGIFDRIYRR CCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3158524; 2002055; 8346018; 9278503; 9298646; 8774726 [H]