| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104565
Identifier: 197104565
GI number: 197104565
Start: 1249248
End: 1250252
Strand: Direct
Name: 197104565
Synonym: PHZ_c1099
Alternate gene names: NA
Gene position: 1249248-1250252 (Clockwise)
Preceding gene: 197104563
Following gene: 197104566
Centisome position: 31.26
GC content: 69.65
Gene sequence:
>1005_bases ATGGCCCTGCCGCCCGTTCTCCGTGACCGCCTCCGCCTGCCGGTGATCGCCAGCCCGCTGTTCATCATCTCGGGGCCGGA GCTGGTGATCGCCCAGTGCAAGGCCGGCGTGGTGGGCTCGTTCCCGGCGCTGAACGCCCGCCCGGCGAGCCTGCTGGACG AGTGGCTGCACCAGATCACCGAGGAGCTGGCCGCCTGGGACCGGGACCATCCCGACACGCCCTCGGCTCCGTTCGCGGTG AACCACATCGTCCACAAGACCAACGACCGCCTGGAGCACGACCTTGAGGCCTCGACCAAGTGGAAGGCGCCGATCGTCAT CACCTCGCTGGGCGCGCGGGAGGACGTGAACGCGGCGGTCCATTCCTACGGCGGGGTGGTGCTGCACGACGTCATCAACA ACCGCTTCGCCAAGAAGGCCGTGGAGAAGGGCGCCGACGGACTCATCGCGGTGGCGGCCGGGGCCGGCGGCCACGCGGGC CAGCTCTCGCCGTTCGCCCTGGTCCAGGAGATCCGCGAGTGGTTCGAGGGTCCCGTCGCGCTGTCGGGCTCGATCGCCAA TGGGCGGGCCATCCTGGGCGCCCAGGCGATGGGCGCGGACCTGGCCTACATCGGCTCGGCGTTCATCGCGACGCAGGAGG CCAACGCCGACGCCGCCTACAAGGAGATGATCGTCGCCTCCAGCGCCGACGACATCGTCTATTCGAACCTCTTCACCGGC GTGCATGGCAACTATCTGGCGCCGTCGATCCGCGCGGCCGGCATGGACCCCGAGAACCTGCCCGAGAGCGATCCGTCGAA GATGAACTTCGGCTCGGGCGGCAACCAGAAGTCCAAGGCCTGGCGCGACATCTGGGGCTGCGGCCAGGGCATCGGAGCGG TGAAGGACATCCCGAGCGCCGCCGAGCGCATCGCCCAGCTCGCCGCCGAGTACGAGGCGGCCAAGGCCGAGCTGGCTGAG AAGACCTCGTTCACCGCAGGCCGCACGCTGCTGGCGGCGGAATAG
Upstream 100 bases:
>100_bases GCTTGCCGGACGTGGCGTCAGTCCAGAGGAAATGCGTTTCGCCCCTGCGGCATGATGTTGTACGTTGTAAATCCAACAAC CGTTCGAGGACCTAGCGCCC
Downstream 100 bases:
>100_bases CCGGCCGCTCGCCCGGGTTCAGGAAAACTGAGCCCGCTTGCAGTGTAATCCTATTTGATACATAGGAATTATTGGGCTTA GTTCGTTCCCATCGAACGAG
Product: 2-nitropropane dioxygenase
Products: NA
Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Dioxygenase; Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQITEELAAWDRDHPDTPSAPFAV NHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAVHSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAG QLSPFALVQEIREWFEGPVALSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSAAERIAQLAAEYEAAKAELAE KTSFTAGRTLLAAE
Sequences:
>Translated_334_residues MALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQITEELAAWDRDHPDTPSAPFAV NHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAVHSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAG QLSPFALVQEIREWFEGPVALSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSAAERIAQLAAEYEAAKAELAE KTSFTAGRTLLAAE >Mature_333_residues ALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQITEELAAWDRDHPDTPSAPFAVN HIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAVHSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAGQ LSPFALVQEIREWFEGPVALSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTGV HGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSAAERIAQLAAEYEAAKAELAEK TSFTAGRTLLAAE
Specific function: Unknown
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35204; Mature: 35073
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQIT CCCCHHHHHHCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EELAAWDRDHPDTPSAPFAVNHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAV HHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH HSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAGQLSPFALVQEIREWFEGPVA HHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG EECCCCCCCEEECHHHHCCHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHC VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSA CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHH AERIAQLAAEYEAAKAELAEKTSFTAGRTLLAAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure ALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQIT CCCHHHHHHCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EELAAWDRDHPDTPSAPFAVNHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAV HHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH HSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAGQLSPFALVQEIREWFEGPVA HHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE LSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG EECCCCCCCEEECHHHHCCHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHC VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSA CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHH AERIAQLAAEYEAAKAELAEKTSFTAGRTLLAAE HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA