Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197104565

Identifier: 197104565

GI number: 197104565

Start: 1249248

End: 1250252

Strand: Direct

Name: 197104565

Synonym: PHZ_c1099

Alternate gene names: NA

Gene position: 1249248-1250252 (Clockwise)

Preceding gene: 197104563

Following gene: 197104566

Centisome position: 31.26

GC content: 69.65

Gene sequence:

>1005_bases
ATGGCCCTGCCGCCCGTTCTCCGTGACCGCCTCCGCCTGCCGGTGATCGCCAGCCCGCTGTTCATCATCTCGGGGCCGGA
GCTGGTGATCGCCCAGTGCAAGGCCGGCGTGGTGGGCTCGTTCCCGGCGCTGAACGCCCGCCCGGCGAGCCTGCTGGACG
AGTGGCTGCACCAGATCACCGAGGAGCTGGCCGCCTGGGACCGGGACCATCCCGACACGCCCTCGGCTCCGTTCGCGGTG
AACCACATCGTCCACAAGACCAACGACCGCCTGGAGCACGACCTTGAGGCCTCGACCAAGTGGAAGGCGCCGATCGTCAT
CACCTCGCTGGGCGCGCGGGAGGACGTGAACGCGGCGGTCCATTCCTACGGCGGGGTGGTGCTGCACGACGTCATCAACA
ACCGCTTCGCCAAGAAGGCCGTGGAGAAGGGCGCCGACGGACTCATCGCGGTGGCGGCCGGGGCCGGCGGCCACGCGGGC
CAGCTCTCGCCGTTCGCCCTGGTCCAGGAGATCCGCGAGTGGTTCGAGGGTCCCGTCGCGCTGTCGGGCTCGATCGCCAA
TGGGCGGGCCATCCTGGGCGCCCAGGCGATGGGCGCGGACCTGGCCTACATCGGCTCGGCGTTCATCGCGACGCAGGAGG
CCAACGCCGACGCCGCCTACAAGGAGATGATCGTCGCCTCCAGCGCCGACGACATCGTCTATTCGAACCTCTTCACCGGC
GTGCATGGCAACTATCTGGCGCCGTCGATCCGCGCGGCCGGCATGGACCCCGAGAACCTGCCCGAGAGCGATCCGTCGAA
GATGAACTTCGGCTCGGGCGGCAACCAGAAGTCCAAGGCCTGGCGCGACATCTGGGGCTGCGGCCAGGGCATCGGAGCGG
TGAAGGACATCCCGAGCGCCGCCGAGCGCATCGCCCAGCTCGCCGCCGAGTACGAGGCGGCCAAGGCCGAGCTGGCTGAG
AAGACCTCGTTCACCGCAGGCCGCACGCTGCTGGCGGCGGAATAG

Upstream 100 bases:

>100_bases
GCTTGCCGGACGTGGCGTCAGTCCAGAGGAAATGCGTTTCGCCCCTGCGGCATGATGTTGTACGTTGTAAATCCAACAAC
CGTTCGAGGACCTAGCGCCC

Downstream 100 bases:

>100_bases
CCGGCCGCTCGCCCGGGTTCAGGAAAACTGAGCCCGCTTGCAGTGTAATCCTATTTGATACATAGGAATTATTGGGCTTA
GTTCGTTCCCATCGAACGAG

Product: 2-nitropropane dioxygenase

Products: NA

Alternate protein names: 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Protein; Oxidoreductase 2-Nitropropane Dioxygenase Family; Dioxygenase; Oxidoreductase; 2-Nitropropane Dioxygenase Family; 2-Nitropropane Dioxygenase Npd; Dioxygenases Related 2-Nitropropane Dioxygenase; 2-Nitropropane Dioxygenase Family Oxidoreductase; 2-Nitropropane Dioxygenase-Like Dioxygenase; Dioxygenase Protein; Transmembrane Protein; Enoyl-(Acyl-Carrier-Protein) Reductase II; 2-Nitropropane Dioxygenase Protein; Dioxygenase Oxidoreductase -Nitropropane Dioxygenase Npd

Number of amino acids: Translated: 334; Mature: 333

Protein sequence:

>334_residues
MALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQITEELAAWDRDHPDTPSAPFAV
NHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAVHSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAG
QLSPFALVQEIREWFEGPVALSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSAAERIAQLAAEYEAAKAELAE
KTSFTAGRTLLAAE

Sequences:

>Translated_334_residues
MALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQITEELAAWDRDHPDTPSAPFAV
NHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAVHSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAG
QLSPFALVQEIREWFEGPVALSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSAAERIAQLAAEYEAAKAELAE
KTSFTAGRTLLAAE
>Mature_333_residues
ALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQITEELAAWDRDHPDTPSAPFAVN
HIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAVHSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAGQ
LSPFALVQEIREWFEGPVALSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTGV
HGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSAAERIAQLAAEYEAAKAELAEK
TSFTAGRTLLAAE

Specific function: Unknown

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35204; Mature: 35073

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQIT
CCCCHHHHHHCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
EELAAWDRDHPDTPSAPFAVNHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAV
HHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
HSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAGQLSPFALVQEIREWFEGPVA
HHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE
LSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG
EECCCCCCCEEECHHHHCCHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHC
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSA
CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHH
AERIAQLAAEYEAAKAELAEKTSFTAGRTLLAAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure 
ALPPVLRDRLRLPVIASPLFIISGPELVIAQCKAGVVGSFPALNARPASLLDEWLHQIT
CCCHHHHHHCCCCEEECCEEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH
EELAAWDRDHPDTPSAPFAVNHIVHKTNDRLEHDLEASTKWKAPIVITSLGAREDVNAAV
HHHHHCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHH
HSYGGVVLHDVINNRFAKKAVEKGADGLIAVAAGAGGHAGQLSPFALVQEIREWFEGPVA
HHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEE
LSGSIANGRAILGAQAMGADLAYIGSAFIATQEANADAAYKEMIVASSADDIVYSNLFTG
EECCCCCCCEEECHHHHCCHHHHHHHHHHEECCCCCHHHHHHHHHHCCCCHHHHHHHHHC
VHGNYLAPSIRAAGMDPENLPESDPSKMNFGSGGNQKSKAWRDIWGCGQGIGAVKDIPSA
CCCCCCCCCHHHCCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHCCHHH
AERIAQLAAEYEAAKAELAEKTSFTAGRTLLAAE
HHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA