| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104493
Identifier: 197104493
GI number: 197104493
Start: 1145623
End: 1146684
Strand: Reverse
Name: 197104493
Synonym: PHZ_c1027
Alternate gene names: NA
Gene position: 1146684-1145623 (Counterclockwise)
Preceding gene: 197104494
Following gene: 197104490
Centisome position: 28.69
GC content: 72.03
Gene sequence:
>1062_bases ATGTCCCTGTTCGAGCGCTGGCTGACCCTGTGGGTCGCCCTCTGCATCGTCGCCGGGATCGCGCTCGGCCAGCTGTTCCC CGCCGCCTTCCGGGCCATCGGCGCGATGGAGGTGGCCCAGGTCAACCTGCCGGTCGCCGGCCTCATCTGGCTGATGATCG TGCCCATGCTGATGAAGGTCGATTTCGGCGCCCTGCGCCAGGTCGGCCGCCACTGGCGCGGCATCGGCGTGACCCTGTTC GTCAACTGGGCGGTGAAGCCCTTCTCCATGGCCCTGCTGGGCGCGGTGTTCATCGGCTGGCTGTTCCGCCCCTGGCTGCC GGCCGGCGAGATCCCCTCCTACATCGCCGGCCTGATCCTGCTGGCCGCCGCCCCCTGCACGGCCATGGTGTTCGTCTGGT CGAACCTGTGCCGAGGCGAGCCGAACTTCACCCTCAGCCAGGTGGCGGTGAACGACGCCATCATGGTGGTCGCCTTCGCC CCGATCGTCGGCCTGCTGCTGGGCCTGTCGGCCATCGTCGTGCCGTGGCAGACGCTGCTGCTGTCGGTGGGGCTCTACAT CGTCGTCCCGGTGATCCTCGCGCAGGGCCTGCGCGCGGCCCTCCTGCGCCGCGGCGGAGAGTCCGGGGGCGAGGCGGGGC TGCAGCGGGCGCTGGCGGCGATCGGCCCGGCCTCCCTGGCCGCCCTGCTGGCGACCCTCGTCCTGCTGTTCGGCTTCCAG GGCGAGCAGATCCTGGCCCAGCCGGCGGTGATCGCGCTGCTGGCGGTGCCGATCCTGATCCAGGTCTACTTCAACGCCGG CCTCGCCTACCTGCTGAACCGCTGGACCGGCGAGGCGCACTGCGTCGCCGGGCCCTCGGCCCTGATCGGCGCCAGCAACT TCTTCGAGCTGGCGGTCGCCGCGGCCATCGGCCTGTTCGGCTTCCGCTCGGGCGCGGCGCTGGCCACCGTCGTGGGCGTG CTGATCGAGGTGCCGGTGATGCTCAGCGTCGTGGCGATCGTGAACCGCACGCGGGGCTGGTACGAGGCCGGCCCCGCCGT GCGCCGGCTGGCCGGCCGCTAG
Upstream 100 bases:
>100_bases GCTGCGCCGGCAAGCCCGAGATCTGCGCGCCGCTCGCCGAGGCGGCCGGCCGCGCCTGCGACGCCCCATGACCGCCGCCG CCCTTCCGGCGCCCAAGCCG
Downstream 100 bases:
>100_bases GCCCTACTGCGGCGTCGGCTGGGCGACCCCGCCCGCCGTGCCGGTCGGCGGCGTCTCGGCGACCGCCGGCGGCCCTTCCG GCGGCACCACGCCGGTCTGG
Product: arsenite efflux pump
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MSLFERWLTLWVALCIVAGIALGQLFPAAFRAIGAMEVAQVNLPVAGLIWLMIVPMLMKVDFGALRQVGRHWRGIGVTLF VNWAVKPFSMALLGAVFIGWLFRPWLPAGEIPSYIAGLILLAAAPCTAMVFVWSNLCRGEPNFTLSQVAVNDAIMVVAFA PIVGLLLGLSAIVVPWQTLLLSVGLYIVVPVILAQGLRAALLRRGGESGGEAGLQRALAAIGPASLAALLATLVLLFGFQ GEQILAQPAVIALLAVPILIQVYFNAGLAYLLNRWTGEAHCVAGPSALIGASNFFELAVAAAIGLFGFRSGAALATVVGV LIEVPVMLSVVAIVNRTRGWYEAGPAVRRLAGR
Sequences:
>Translated_353_residues MSLFERWLTLWVALCIVAGIALGQLFPAAFRAIGAMEVAQVNLPVAGLIWLMIVPMLMKVDFGALRQVGRHWRGIGVTLF VNWAVKPFSMALLGAVFIGWLFRPWLPAGEIPSYIAGLILLAAAPCTAMVFVWSNLCRGEPNFTLSQVAVNDAIMVVAFA PIVGLLLGLSAIVVPWQTLLLSVGLYIVVPVILAQGLRAALLRRGGESGGEAGLQRALAAIGPASLAALLATLVLLFGFQ GEQILAQPAVIALLAVPILIQVYFNAGLAYLLNRWTGEAHCVAGPSALIGASNFFELAVAAAIGLFGFRSGAALATVVGV LIEVPVMLSVVAIVNRTRGWYEAGPAVRRLAGR >Mature_352_residues SLFERWLTLWVALCIVAGIALGQLFPAAFRAIGAMEVAQVNLPVAGLIWLMIVPMLMKVDFGALRQVGRHWRGIGVTLFV NWAVKPFSMALLGAVFIGWLFRPWLPAGEIPSYIAGLILLAAAPCTAMVFVWSNLCRGEPNFTLSQVAVNDAIMVVAFAP IVGLLLGLSAIVVPWQTLLLSVGLYIVVPVILAQGLRAALLRRGGESGGEAGLQRALAAIGPASLAALLATLVLLFGFQG EQILAQPAVIALLAVPILIQVYFNAGLAYLLNRWTGEAHCVAGPSALIGASNFFELAVAAAIGLFGFRSGAALATVVGVL IEVPVMLSVVAIVNRTRGWYEAGPAVRRLAGR
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=347, Percent_Identity=25.3602305475504, Blast_Score=85, Evalue=2e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 37283; Mature: 37152
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLFERWLTLWVALCIVAGIALGQLFPAAFRAIGAMEVAQVNLPVAGLIWLMIVPMLMKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC DFGALRQVGRHWRGIGVTLFVNWAVKPFSMALLGAVFIGWLFRPWLPAGEIPSYIAGLIL CHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LAAAPCTAMVFVWSNLCRGEPNFTLSQVAVNDAIMVVAFAPIVGLLLGLSAIVVPWQTLL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVGLYIVVPVILAQGLRAALLRRGGESGGEAGLQRALAAIGPASLAALLATLVLLFGFQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC GEQILAQPAVIALLAVPILIQVYFNAGLAYLLNRWTGEAHCVAGPSALIGASNFFELAVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHHH AAIGLFGFRSGAALATVVGVLIEVPVMLSVVAIVNRTRGWYEAGPAVRRLAGR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCC >Mature Secondary Structure SLFERWLTLWVALCIVAGIALGQLFPAAFRAIGAMEVAQVNLPVAGLIWLMIVPMLMKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC DFGALRQVGRHWRGIGVTLFVNWAVKPFSMALLGAVFIGWLFRPWLPAGEIPSYIAGLIL CHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LAAAPCTAMVFVWSNLCRGEPNFTLSQVAVNDAIMVVAFAPIVGLLLGLSAIVVPWQTLL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSVGLYIVVPVILAQGLRAALLRRGGESGGEAGLQRALAAIGPASLAALLATLVLLFGFQ HHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCC GEQILAQPAVIALLAVPILIQVYFNAGLAYLLNRWTGEAHCVAGPSALIGASNFFELAVA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCHHHHHHHHH AAIGLFGFRSGAALATVVGVLIEVPVMLSVVAIVNRTRGWYEAGPAVRRLAGR HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]