| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104447
Identifier: 197104447
GI number: 197104447
Start: 1084776
End: 1085756
Strand: Reverse
Name: 197104447
Synonym: PHZ_c0981
Alternate gene names: NA
Gene position: 1085756-1084776 (Counterclockwise)
Preceding gene: 197104448
Following gene: 197104446
Centisome position: 27.17
GC content: 63.1
Gene sequence:
>981_bases ATGTCGCTCGCGCGCAGACGGGCCCCGATGCGCGTCCCCTACGAGGCTGCCGACTTTCCATCTGGGTCTGTCCGCAACAC GAAGAGCCATCTCGATGTCAGCTGGGACGAGATCCTATGGGCTGCCCTGACGGTCGGCAGGCCCAACATTCATGCCGTGT TCGACTACGGCGCAGCCTCCCTGCACGAGGCCCTGTTCAGGATCTCCGCCGTCAGGCTTGCCGTCGAACAGCGCGTCCAT TGGGACCCTCGGCTTCGTCGAACCGACGCCTTCAGGAGACTCGATCCTACGGAAAAGGGGGCGGTCAGCTACTTCCTCGG CATGACCTTCTGCAAGGTGTTTGCCTCACGGATGCTCAATACGCCTTGGCTCCTCCATCTCGATGTCTTCAAGGACCAAG TCGGCGCCATGCTCCACGAGCGATCACGACCAGATCTGATAGGTCAGAACGCGTCCACCGGAGACTGGTACTCTTTCGAA AGCAAGGGCCGCAGCTCCCCTCCCACGACGGGCGACAAAGACAACGCCAAGGGACAGGCGAGTCGGATCGCATCGGTGGA CGGCCAGGCGCCCGCGCTGCACATCGCCTCCTTCACCTTCCTACGCAGCGAGGAGTTGGAGTTCTACTGGCGAGACCCGG AGCCTCTCGGCGAACCCATCGTCATTTCCGACACCGAAGGAGCGTGGCGCTGGCACTATGAGCCCGTGACGATGCTCTGG CGGGCGGCCGCCTCAGACGCAGCAGACGCCCCCGACGCTGAAGCTCGGGTCAAAAGCCTCGAAGATGTCGATCTCGGCGT CGCCATTCACCCGAAGATCGCCCGCGCCCTTGAGAACGACGACTGGTCCACGGCACGGAAGATCGCCCTCGGCATGCAGC AAGAGCTGCGGGAGCTTAGCTACGAACCGGACGGCGTGGCTATCCGTACCGGTCCCTCTTGGACTCTGCCTTTCCGCAGT GACGAGCAGCCCTTCGGTTAG
Upstream 100 bases:
>100_bases TGGAAGCCAGCCTCACCGCCGCCGATTCCACCCGGCGGAAGCTGCTCGAAGCCCTCCTGGCCGAGGCCCTTAGCGAGCCG GCCATAGCGAAGGCTGCCTA
Downstream 100 bases:
>100_bases GTCCGCGCATGCTCTTCTCCAACGCTCTGTGGACCTTCGTCGCCCCGGCTCAGCGGCTCGTCGCGCCCGCCCTTCTCGAC GCAGTGTAGCCGCAATGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSLARRRAPMRVPYEAADFPSGSVRNTKSHLDVSWDEILWAALTVGRPNIHAVFDYGAASLHEALFRISAVRLAVEQRVH WDPRLRRTDAFRRLDPTEKGAVSYFLGMTFCKVFASRMLNTPWLLHLDVFKDQVGAMLHERSRPDLIGQNASTGDWYSFE SKGRSSPPTTGDKDNAKGQASRIASVDGQAPALHIASFTFLRSEELEFYWRDPEPLGEPIVISDTEGAWRWHYEPVTMLW RAAASDAADAPDAEARVKSLEDVDLGVAIHPKIARALENDDWSTARKIALGMQQELRELSYEPDGVAIRTGPSWTLPFRS DEQPFG
Sequences:
>Translated_326_residues MSLARRRAPMRVPYEAADFPSGSVRNTKSHLDVSWDEILWAALTVGRPNIHAVFDYGAASLHEALFRISAVRLAVEQRVH WDPRLRRTDAFRRLDPTEKGAVSYFLGMTFCKVFASRMLNTPWLLHLDVFKDQVGAMLHERSRPDLIGQNASTGDWYSFE SKGRSSPPTTGDKDNAKGQASRIASVDGQAPALHIASFTFLRSEELEFYWRDPEPLGEPIVISDTEGAWRWHYEPVTMLW RAAASDAADAPDAEARVKSLEDVDLGVAIHPKIARALENDDWSTARKIALGMQQELRELSYEPDGVAIRTGPSWTLPFRS DEQPFG >Mature_325_residues SLARRRAPMRVPYEAADFPSGSVRNTKSHLDVSWDEILWAALTVGRPNIHAVFDYGAASLHEALFRISAVRLAVEQRVHW DPRLRRTDAFRRLDPTEKGAVSYFLGMTFCKVFASRMLNTPWLLHLDVFKDQVGAMLHERSRPDLIGQNASTGDWYSFES KGRSSPPTTGDKDNAKGQASRIASVDGQAPALHIASFTFLRSEELEFYWRDPEPLGEPIVISDTEGAWRWHYEPVTMLWR AAASDAADAPDAEARVKSLEDVDLGVAIHPKIARALENDDWSTARKIALGMQQELRELSYEPDGVAIRTGPSWTLPFRSD EQPFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36649; Mature: 36518
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLARRRAPMRVPYEAADFPSGSVRNTKSHLDVSWDEILWAALTVGRPNIHAVFDYGAAS CCCCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHH LHEALFRISAVRLAVEQRVHWDPRLRRTDAFRRLDPTEKGAVSYFLGMTFCKVFASRMLN HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC TPWLLHLDVFKDQVGAMLHERSRPDLIGQNASTGDWYSFESKGRSSPPTTGDKDNAKGQA CCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHH SRIASVDGQAPALHIASFTFLRSEELEFYWRDPEPLGEPIVISDTEGAWRWHYEPVTMLW HHHHCCCCCCCEEEEHHHHEEECCCCEEEECCCCCCCCCEEEECCCCCEEEECCHHHHHH RAAASDAADAPDAEARVKSLEDVDLGVAIHPKIARALENDDWSTARKIALGMQQELRELS HHHHCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC YEPDGVAIRTGPSWTLPFRSDEQPFG CCCCCEEEECCCCEECCCCCCCCCCC >Mature Secondary Structure SLARRRAPMRVPYEAADFPSGSVRNTKSHLDVSWDEILWAALTVGRPNIHAVFDYGAAS CCCHHCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHCCCCCEEEEECCCHHH LHEALFRISAVRLAVEQRVHWDPRLRRTDAFRRLDPTEKGAVSYFLGMTFCKVFASRMLN HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC TPWLLHLDVFKDQVGAMLHERSRPDLIGQNASTGDWYSFESKGRSSPPTTGDKDNAKGQA CCEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHH SRIASVDGQAPALHIASFTFLRSEELEFYWRDPEPLGEPIVISDTEGAWRWHYEPVTMLW HHHHCCCCCCCEEEEHHHHEEECCCCEEEECCCCCCCCCEEEECCCCCEEEECCHHHHHH RAAASDAADAPDAEARVKSLEDVDLGVAIHPKIARALENDDWSTARKIALGMQQELRELS HHHHCCCCCCCCHHHHHHHHHHCCCCEEECHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC YEPDGVAIRTGPSWTLPFRSDEQPFG CCCCCEEEECCCCEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA