| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104370
Identifier: 197104370
GI number: 197104370
Start: 997719
End: 998894
Strand: Reverse
Name: 197104370
Synonym: PHZ_c0904
Alternate gene names: NA
Gene position: 998894-997719 (Counterclockwise)
Preceding gene: 197104371
Following gene: 197104369
Centisome position: 25.0
GC content: 64.46
Gene sequence:
>1176_bases ATGTTCATGCGCTTCTTCACCGAGCTGCGCGACGCCAAGGTGCCGGTGACGCTGAAAGAGTACCTCGCGCTGATGGAGGG GCTCGACAAGGGCGTCATCGACCGCAAGGTGGACGACTTCTACTACCTGTCCCGCGCCGCGCTGGTGAAGGACGAGAAGA ACCTCGACAAGTTCGACCAGGTGTTCGGCCACGTCTTCAAGGGGCTGGAGAAGCTGGACGACGGGATCGCCGCCGACATC CCCGCCGAGTGGCTGCGCAAGATCTCCGAGAAGTTCCTCACCGAGGAGGAGAAGGCCCAGATCGAGGCCATGGGCGGCTT CGACAAGCTGATGGAGGCCCTGGCCGAGCGCATCCGCGAGCAGAAGGAGCGCCACGAGGGCGGCAACAAGATGATCGGCA CCGGCGGCACCTCGCCGTTCGGCGCCAACGGCTACAACCCCGAAGGCGTGCGGATCGGCCAGGACAAGGGCCGGCACGGC AAGGCGGTGAAGGTCTGGGACAAGCGCGAGTACAAGAACCTGGACGACCAGGTCGAGCTCGGCACCCGCAACATCAAGGT GGCCCTGCGCCGCCTGCGCAAATGGGTCCGCGACGGCGCGCCCGACGAGCTGGACCTGGACGGCACCATCAAGGGGACCG CCGAGAAGGGCTACCTCGACATCCACATGCGCCCCGAGCGCCGCAACAAGATCAGCGTCCTGATCTTCTTCGACATCGGC GGCTCGATGGATTCCCACATCAAGGTCTGCGAGGAGCTGTTCAGCGCCGCGCGGTCCGAGTTCAAGAACATGGAGTTCTA CTACTTCCACAACTGCCTCTACGAGGCCGTGTGGAAGGACAACCGCCGCCGCCACGCCGAGAAGATCCCGACCTGGGACG TGCTCCACAAGTTCCCCCACGACTACAAGGTCATCTTCGTGGGCGACGCCACCATGAGCCCGTACGAGATCACCTATCCG GGCGGCTCGGTGGAGCACTGGAACGAGGAGGCCGGCGCGGTCTGGCTGGACCGGGTCACCCAGATCTACGAGCACGCTGT GTGGCTGAACCCCACCGCCGAGCGGCACTGGGACTACACGCCCTCGATCGGAGTCATCAAACAGCTGATGAACGACCGGA TGTTCCCCCTCACCATCGAGGGGCTGGAGAAGGCGATGAAGGAGCTCGCCCGCTAG
Upstream 100 bases:
>100_bases CGAGGCGCGGGCCTAGAGGCCGGCGCGACGCTGGACATCGCGGACCCGCGGCCCCATCCTTCGCGTTCAAACGATTGTTC GCCTTGAGGGCCCGCCCCCG
Downstream 100 bases:
>100_bases TTTTGCGCCGAGCCCGGATCGACCTAAGCTCGCGCAAACCTTTAGGGATTCGCATGACCGATCCCCTCTCCCAGGATCCG CCGGAAACGGAAGAGGCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Von Willebrand Factor Type A(VWA) Domain Protein; VWA Containing CoxE-Like Family Protein
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MFMRFFTELRDAKVPVTLKEYLALMEGLDKGVIDRKVDDFYYLSRAALVKDEKNLDKFDQVFGHVFKGLEKLDDGIAADI PAEWLRKISEKFLTEEEKAQIEAMGGFDKLMEALAERIREQKERHEGGNKMIGTGGTSPFGANGYNPEGVRIGQDKGRHG KAVKVWDKREYKNLDDQVELGTRNIKVALRRLRKWVRDGAPDELDLDGTIKGTAEKGYLDIHMRPERRNKISVLIFFDIG GSMDSHIKVCEELFSAARSEFKNMEFYYFHNCLYEAVWKDNRRRHAEKIPTWDVLHKFPHDYKVIFVGDATMSPYEITYP GGSVEHWNEEAGAVWLDRVTQIYEHAVWLNPTAERHWDYTPSIGVIKQLMNDRMFPLTIEGLEKAMKELAR
Sequences:
>Translated_391_residues MFMRFFTELRDAKVPVTLKEYLALMEGLDKGVIDRKVDDFYYLSRAALVKDEKNLDKFDQVFGHVFKGLEKLDDGIAADI PAEWLRKISEKFLTEEEKAQIEAMGGFDKLMEALAERIREQKERHEGGNKMIGTGGTSPFGANGYNPEGVRIGQDKGRHG KAVKVWDKREYKNLDDQVELGTRNIKVALRRLRKWVRDGAPDELDLDGTIKGTAEKGYLDIHMRPERRNKISVLIFFDIG GSMDSHIKVCEELFSAARSEFKNMEFYYFHNCLYEAVWKDNRRRHAEKIPTWDVLHKFPHDYKVIFVGDATMSPYEITYP GGSVEHWNEEAGAVWLDRVTQIYEHAVWLNPTAERHWDYTPSIGVIKQLMNDRMFPLTIEGLEKAMKELAR >Mature_391_residues MFMRFFTELRDAKVPVTLKEYLALMEGLDKGVIDRKVDDFYYLSRAALVKDEKNLDKFDQVFGHVFKGLEKLDDGIAADI PAEWLRKISEKFLTEEEKAQIEAMGGFDKLMEALAERIREQKERHEGGNKMIGTGGTSPFGANGYNPEGVRIGQDKGRHG KAVKVWDKREYKNLDDQVELGTRNIKVALRRLRKWVRDGAPDELDLDGTIKGTAEKGYLDIHMRPERRNKISVLIFFDIG GSMDSHIKVCEELFSAARSEFKNMEFYYFHNCLYEAVWKDNRRRHAEKIPTWDVLHKFPHDYKVIFVGDATMSPYEITYP GGSVEHWNEEAGAVWLDRVTQIYEHAVWLNPTAERHWDYTPSIGVIKQLMNDRMFPLTIEGLEKAMKELAR
Specific function: Unknown
COG id: COG3825
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45319; Mature: 45319
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMRFFTELRDAKVPVTLKEYLALMEGLDKGVIDRKVDDFYYLSRAALVKDEKNLDKFDQ CHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VFGHVFKGLEKLDDGIAADIPAEWLRKISEKFLTEEEKAQIEAMGGFDKLMEALAERIRE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH QKERHEGGNKMIGTGGTSPFGANGYNPEGVRIGQDKGRHGKAVKVWDKREYKNLDDQVEL HHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCHHHCCCCCHHHH GTRNIKVALRRLRKWVRDGAPDELDLDGTIKGTAEKGYLDIHMRPERRNKISVLIFFDIG CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCEEEEEEEEECC GSMDSHIKVCEELFSAARSEFKNMEFYYFHNCLYEAVWKDNRRRHAEKIPTWDVLHKFPH CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC DYKVIFVGDATMSPYEITYPGGSVEHWNEEAGAVWLDRVTQIYEHAVWLNPTAERHWDYT CEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHCCCCC PSIGVIKQLMNDRMFPLTIEGLEKAMKELAR CCHHHHHHHHCCCCCEEEHHHHHHHHHHHCC >Mature Secondary Structure MFMRFFTELRDAKVPVTLKEYLALMEGLDKGVIDRKVDDFYYLSRAALVKDEKNLDKFDQ CHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH VFGHVFKGLEKLDDGIAADIPAEWLRKISEKFLTEEEKAQIEAMGGFDKLMEALAERIRE HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHH QKERHEGGNKMIGTGGTSPFGANGYNPEGVRIGQDKGRHGKAVKVWDKREYKNLDDQVEL HHHHHCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCCCCCEEEEECCHHHCCCCCHHHH GTRNIKVALRRLRKWVRDGAPDELDLDGTIKGTAEKGYLDIHMRPERRNKISVLIFFDIG CHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCEEEEEECCCCCCEEEEEEEEECC GSMDSHIKVCEELFSAARSEFKNMEFYYFHNCLYEAVWKDNRRRHAEKIPTWDVLHKFPH CCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCC DYKVIFVGDATMSPYEITYPGGSVEHWNEEAGAVWLDRVTQIYEHAVWLNPTAERHWDYT CEEEEEEECCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCHHHCCCCC PSIGVIKQLMNDRMFPLTIEGLEKAMKELAR CCHHHHHHHHCCCCCEEEHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA