| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197104362
Identifier: 197104362
GI number: 197104362
Start: 989363
End: 990670
Strand: Reverse
Name: 197104362
Synonym: PHZ_c0896
Alternate gene names: NA
Gene position: 990670-989363 (Counterclockwise)
Preceding gene: 197104363
Following gene: 197104361
Centisome position: 24.79
GC content: 70.41
Gene sequence:
>1308_bases TTGGACGATCCGGCCGACGCCTCCCGTCCCGCCGCGGCGGACGACGACCTGCCCGCGCGCGAGGCGGCCTACGAGAAGTT CGTCTGGGACAACCTGCGACGCAACTACCTCGCCCACTACCTGCACGGCATGCTGGGCATGACCGGCTTTCGGCTGATCA ACGCCCCCACCTTCCTGCCCGCCTATCTGCACGCGGTCTCGGGCTCGAACGCGATCGTCGGGCTCGGGCTGGCGCTACAG CAGCTCGGCGGGATCATCTCGCCCATCTTCGGCGCCACCAAGGTCGAGCACCGCACCAAGGTCATGCCGGCGGCGCTGTG GATGGGCGGCCTGGGGCGCCTGGCCATCCTGGGCATGGCGGCGGCCGGCTGGATGCTCTCGGGCCAGCCGCTGGTCGTGG CCCTGCTGTTCTTCATCTTCATGTTCGGCGTCTTCATGGGCGCCCAGCGGGTGGTGTTCTCGCTCCTGATGTCGAAGGTG ATCCCGCTCAGTCGGCGCGGGCGCCTGCAGGCCTGGCGCAACGCCACCGGCGGGGCGATCGCCGCCGTGCTCGCCTACTT CGCCGGCAAGTACTTCGTCGGGAAGGACCTGTTCGGGAACGGCTATTCGACCACCTTCGCGTTCGCCTTCCTGCTGACCA GCGCCGGCCTCTGGGCGCTGCAGGTGCTGATGAAGGAGCCCGAGCCGCCCACCACCCGGCCGCGGGCCCGCTTCCGGGAC CGGCTGCGGGAATTCCCCGCCCTGATCGCCGAGGACCGCGCCTACGGCTTCTTCCTGCTGGTGCAGATGCTGACCACCTC GGCGCGGATCGCCACGCCGTTCTACATCCTCTACGTGGGCCGGATGATCGGGGCCGACGGGGCGATGCTGGGCCTGCTGT CGTTCGCCTTCCTGGGCGCGGACACGGCGGCGAACCTGGTCTGGGGCTACCTGGGCGACAAGACCGGCTTCCGGCTGGTG CTGCTGATCTCGCTGCTGGGCTGGATCGGCGCGACCCTGCTGCTGCTCAACGTGCACGAGGTCTGGGCGACGTTCATGGC CTTCGCCGGCCTCGGCGCCGCGTCCTCGGGCTACATGATGGCGGCCCAGACCATGATCCTGGAGTTCGGCGCCCGCGACG ACCTGCCGATGCGCATCGCCGTCTCGGCCACGGCCGAGAGCATCACCGCCACCGCCGGTCCCCTCCTGGGCGGGCTCGTG GCCGAGGCGTTCGGCTACACCGCCGTGTTCGGCGCCTCGCTCGCCTTCCTGGGCGCGGCGCTCGTCATCCTGATCCTCGC CGTGCAGGACCCGAGGCGGCGGACCTAG
Upstream 100 bases:
>100_bases CGCACCCTCCCCGGCCTTCGGGGACTCTGCTAGACCGGCCCCATTGAATTCATCCGTTTCCTGAAGGGGCCGCGCCGCCC TGGCGCGCGGCCGAGACGAT
Downstream 100 bases:
>100_bases ATTCCGCCCACGGTGTCGGCGGACGGCCCCGCCGCACGTCCTTGGGGCGCAAACCTCAAGGGAGACGCGCCATGCGGATG ATCTTCGTGAACCTGCCCGT
Product: permease of the major facilitator superfamily
Products: NA
Alternate protein names: Permease Of Facilitator Superfamily
Number of amino acids: Translated: 435; Mature: 435
Protein sequence:
>435_residues MDDPADASRPAAADDDLPAREAAYEKFVWDNLRRNYLAHYLHGMLGMTGFRLINAPTFLPAYLHAVSGSNAIVGLGLALQ QLGGIISPIFGATKVEHRTKVMPAALWMGGLGRLAILGMAAAGWMLSGQPLVVALLFFIFMFGVFMGAQRVVFSLLMSKV IPLSRRGRLQAWRNATGGAIAAVLAYFAGKYFVGKDLFGNGYSTTFAFAFLLTSAGLWALQVLMKEPEPPTTRPRARFRD RLREFPALIAEDRAYGFFLLVQMLTTSARIATPFYILYVGRMIGADGAMLGLLSFAFLGADTAANLVWGYLGDKTGFRLV LLISLLGWIGATLLLLNVHEVWATFMAFAGLGAASSGYMMAAQTMILEFGARDDLPMRIAVSATAESITATAGPLLGGLV AEAFGYTAVFGASLAFLGAALVILILAVQDPRRRT
Sequences:
>Translated_435_residues MDDPADASRPAAADDDLPAREAAYEKFVWDNLRRNYLAHYLHGMLGMTGFRLINAPTFLPAYLHAVSGSNAIVGLGLALQ QLGGIISPIFGATKVEHRTKVMPAALWMGGLGRLAILGMAAAGWMLSGQPLVVALLFFIFMFGVFMGAQRVVFSLLMSKV IPLSRRGRLQAWRNATGGAIAAVLAYFAGKYFVGKDLFGNGYSTTFAFAFLLTSAGLWALQVLMKEPEPPTTRPRARFRD RLREFPALIAEDRAYGFFLLVQMLTTSARIATPFYILYVGRMIGADGAMLGLLSFAFLGADTAANLVWGYLGDKTGFRLV LLISLLGWIGATLLLLNVHEVWATFMAFAGLGAASSGYMMAAQTMILEFGARDDLPMRIAVSATAESITATAGPLLGGLV AEAFGYTAVFGASLAFLGAALVILILAVQDPRRRT >Mature_435_residues MDDPADASRPAAADDDLPAREAAYEKFVWDNLRRNYLAHYLHGMLGMTGFRLINAPTFLPAYLHAVSGSNAIVGLGLALQ QLGGIISPIFGATKVEHRTKVMPAALWMGGLGRLAILGMAAAGWMLSGQPLVVALLFFIFMFGVFMGAQRVVFSLLMSKV IPLSRRGRLQAWRNATGGAIAAVLAYFAGKYFVGKDLFGNGYSTTFAFAFLLTSAGLWALQVLMKEPEPPTTRPRARFRD RLREFPALIAEDRAYGFFLLVQMLTTSARIATPFYILYVGRMIGADGAMLGLLSFAFLGADTAANLVWGYLGDKTGFRLV LLISLLGWIGATLLLLNVHEVWATFMAFAGLGAASSGYMMAAQTMILEFGARDDLPMRIAVSATAESITATAGPLLGGLV AEAFGYTAVFGASLAFLGAALVILILAVQDPRRRT
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46763; Mature: 46763
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDPADASRPAAADDDLPAREAAYEKFVWDNLRRNYLAHYLHGMLGMTGFRLINAPTFLP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AYLHAVSGSNAIVGLGLALQQLGGIISPIFGATKVEHRTKVMPAALWMGGLGRLAILGMA HHHHHHCCCCCEEHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AAGWMLSGQPLVVALLFFIFMFGVFMGAQRVVFSLLMSKVIPLSRRGRLQAWRNATGGAI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHH AAVLAYFAGKYFVGKDLFGNGYSTTFAFAFLLTSAGLWALQVLMKEPEPPTTRPRARFRD HHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHH RLREFPALIAEDRAYGFFLLVQMLTTSARIATPFYILYVGRMIGADGAMLGLLSFAFLGA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC DTAANLVWGYLGDKTGFRLVLLISLLGWIGATLLLLNVHEVWATFMAFAGLGAASSGYMM CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH AAQTMILEFGARDDLPMRIAVSATAESITATAGPLLGGLVAEAFGYTAVFGASLAFLGAA HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVILILAVQDPRRRT HHHHHHHCCCCCCCC >Mature Secondary Structure MDDPADASRPAAADDDLPAREAAYEKFVWDNLRRNYLAHYLHGMLGMTGFRLINAPTFLP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH AYLHAVSGSNAIVGLGLALQQLGGIISPIFGATKVEHRTKVMPAALWMGGLGRLAILGMA HHHHHHCCCCCEEHHHHHHHHHCHHHHHHHCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AAGWMLSGQPLVVALLFFIFMFGVFMGAQRVVFSLLMSKVIPLSRRGRLQAWRNATGGAI HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHH AAVLAYFAGKYFVGKDLFGNGYSTTFAFAFLLTSAGLWALQVLMKEPEPPTTRPRARFRD HHHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCHHHHHH RLREFPALIAEDRAYGFFLLVQMLTTSARIATPFYILYVGRMIGADGAMLGLLSFAFLGA HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC DTAANLVWGYLGDKTGFRLVLLISLLGWIGATLLLLNVHEVWATFMAFAGLGAASSGYMM CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH AAQTMILEFGARDDLPMRIAVSATAESITATAGPLLGGLVAEAFGYTAVFGASLAFLGAA HHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVILILAVQDPRRRT HHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA