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The map label for this gene is 197104350

Identifier: 197104350

GI number: 197104350

Start: 977771

End: 978913

Strand: Reverse

Name: 197104350

Synonym: PHZ_c0884

Alternate gene names: NA

Gene position: 978913-977771 (Counterclockwise)

Preceding gene: 197104354

Following gene: 197104349

Centisome position: 24.5

GC content: 68.07

Gene sequence:

>1143_bases
ATGTCTCTGGCCTTGGCCACCCTGATCCACGAATGGCGGCGGTACACCGCCGCGGTCGTGGCGCTCGCGTTTTCGGGCCT
GCTGATCCTGGCGCAGGTCGGGATGTTCGTCGGCATCGTGAAAGGCGTCACCGCCACGATCGACCGCTCCCGGGCCGACC
TGATGATCCTGCCGGCCAAGATGGAGAGCCTGATCAACTCGGGCGGCGGCAACCTGCCCGGACGCCTGCAGCCGCAGATC
TACATGCACCCCGACGTCGCCGAGGTCGCCTCGTGGGACATCGAGGGCGGCCGCTGGGTCAACCGGCCTCCCGAGGGCCA
GCAGGCGGTCACCACCTATGTGAACATCTACATGGTCGACACGCGGCCGAACGCGGTGACGCTGCCGGTCGACTATTCCG
AGCAGGTCCGCCAGGCCCTGATGGAGCCCTATGCGGTGGCCATCGACGAGACCCAGCTGAAGCGGCTGGGGGTGAAGCTG
GGGGATTCGGCCTCGCTCAACGGCAAGACGGTCCGGGTCCGGGCCGTGCTGACCGGCTATCCCAACATCAACAACGCGGC
CGTCGTGGCCTCCCGCGACACCATCCGGCTGCTCGGCTTCATGGCCGACGAGAGCAAGACCGGCCCGCTGATGGTGCGGC
TGAAGGATCCGGCGCGGGCCGAGATCGTGCGCGACCAGCTGAACGCCAACGCCAACGGCGCCTACCGCGCCTGGACCCGC
GAGGAGCTGCGCAAGGCCGACGAGGGCGCCCTCATGGGCGAGCAGATCATCGGCATCTTCATCGGGTTCTCGGTCTTCCT
GGGCTTTCTGATCGGGGTCGGCATCACCTCGCAGACCCTGCGCGGGGCGATCCTCTCCAGCATCAAGGAGTTCGCGAGCC
TGCGGGCGCTCGGGGTCTCGATGGGCGCGCTGCGCCTGATCGTGATGGAGCTGTCGATCTGGGTCGGCCTCGTCGGCCTG
GTCGCCACCGGCCTCCTGACCTTCGGCATCTACCTGCTGGCCGCCAACGGCGGCCTGCCGATGGGCTTCCCGACGCCATG
GGTGATCGGCGTCTCGATCCTGCTGATCGCCATCTCGTGCGCCTCGGGCCTGCTGGCCCTGGGCATCCTGAAGAAGAGCC
AACCTGCGGACCTGCTGCGATGA

Upstream 100 bases:

>100_bases
CATTACGAAGGTTTAATCGCGAAGGTCGCATCCGCCGGCGGTCCCGGCGGCCTCTTTCCCAGTGAAGCGCATCCAGCGCT
GGGGAAGGCGTCGCACCACC

Downstream 100 bases:

>100_bases
GCGCCAATCCCACCGCGATCGAGGCCCACGGCGTCTACAAGCGCTTCAAGACCGGGCGCACGCACATCGAGGTGCTGAAG
CGGGTCGATTTCGACGCCCG

Product: ABC-type antimicrobial peptide transport system, permease component

Products: NA

Alternate protein names: Efflux ABC Transporter Permease Protein; DevC Protein; ABC Transporter Membrane Protein; ABC-Transporter DevC-Like-Protein; ABC Efflux Pump Inner Membrane Subunit

Number of amino acids: Translated: 380; Mature: 379

Protein sequence:

>380_residues
MSLALATLIHEWRRYTAAVVALAFSGLLILAQVGMFVGIVKGVTATIDRSRADLMILPAKMESLINSGGGNLPGRLQPQI
YMHPDVAEVASWDIEGGRWVNRPPEGQQAVTTYVNIYMVDTRPNAVTLPVDYSEQVRQALMEPYAVAIDETQLKRLGVKL
GDSASLNGKTVRVRAVLTGYPNINNAAVVASRDTIRLLGFMADESKTGPLMVRLKDPARAEIVRDQLNANANGAYRAWTR
EELRKADEGALMGEQIIGIFIGFSVFLGFLIGVGITSQTLRGAILSSIKEFASLRALGVSMGALRLIVMELSIWVGLVGL
VATGLLTFGIYLLAANGGLPMGFPTPWVIGVSILLIAISCASGLLALGILKKSQPADLLR

Sequences:

>Translated_380_residues
MSLALATLIHEWRRYTAAVVALAFSGLLILAQVGMFVGIVKGVTATIDRSRADLMILPAKMESLINSGGGNLPGRLQPQI
YMHPDVAEVASWDIEGGRWVNRPPEGQQAVTTYVNIYMVDTRPNAVTLPVDYSEQVRQALMEPYAVAIDETQLKRLGVKL
GDSASLNGKTVRVRAVLTGYPNINNAAVVASRDTIRLLGFMADESKTGPLMVRLKDPARAEIVRDQLNANANGAYRAWTR
EELRKADEGALMGEQIIGIFIGFSVFLGFLIGVGITSQTLRGAILSSIKEFASLRALGVSMGALRLIVMELSIWVGLVGL
VATGLLTFGIYLLAANGGLPMGFPTPWVIGVSILLIAISCASGLLALGILKKSQPADLLR
>Mature_379_residues
SLALATLIHEWRRYTAAVVALAFSGLLILAQVGMFVGIVKGVTATIDRSRADLMILPAKMESLINSGGGNLPGRLQPQIY
MHPDVAEVASWDIEGGRWVNRPPEGQQAVTTYVNIYMVDTRPNAVTLPVDYSEQVRQALMEPYAVAIDETQLKRLGVKLG
DSASLNGKTVRVRAVLTGYPNINNAAVVASRDTIRLLGFMADESKTGPLMVRLKDPARAEIVRDQLNANANGAYRAWTRE
ELRKADEGALMGEQIIGIFIGFSVFLGFLIGVGITSQTLRGAILSSIKEFASLRALGVSMGALRLIVMELSIWVGLVGLV
ATGLLTFGIYLLAANGGLPMGFPTPWVIGVSILLIAISCASGLLALGILKKSQPADLLR

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40770; Mature: 40639

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLALATLIHEWRRYTAAVVALAFSGLLILAQVGMFVGIVKGVTATIDRSRADLMILPAK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHH
MESLINSGGGNLPGRLQPQIYMHPDVAEVASWDIEGGRWVNRPPEGQQAVTTYVNIYMVD
HHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCEECCCCCCCCHHEEEEEEEEEEE
TRPNAVTLPVDYSEQVRQALMEPYAVAIDETQLKRLGVKLGDSASLNGKTVRVRAVLTGY
CCCCEEEEECCHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC
PNINNAAVVASRDTIRLLGFMADESKTGPLMVRLKDPARAEIVRDQLNANANGAYRAWTR
CCCCCCEEEECCCCEEEHEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEHHHH
EELRKADEGALMGEQIIGIFIGFSVFLGFLIGVGITSQTLRGAILSSIKEFASLRALGVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGALRLIVMELSIWVGLVGLVATGLLTFGIYLLAANGGLPMGFPTPWVIGVSILLIAISC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHH
ASGLLALGILKKSQPADLLR
HHHHHHHHHHCCCCCHHHCC
>Mature Secondary Structure 
SLALATLIHEWRRYTAAVVALAFSGLLILAQVGMFVGIVKGVTATIDRSRADLMILPAK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHH
MESLINSGGGNLPGRLQPQIYMHPDVAEVASWDIEGGRWVNRPPEGQQAVTTYVNIYMVD
HHHHHHCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCEECCCCCCCCHHEEEEEEEEEEE
TRPNAVTLPVDYSEQVRQALMEPYAVAIDETQLKRLGVKLGDSASLNGKTVRVRAVLTGY
CCCCEEEEECCHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCCCCCEEEEEEEEECC
PNINNAAVVASRDTIRLLGFMADESKTGPLMVRLKDPARAEIVRDQLNANANGAYRAWTR
CCCCCCEEEECCCCEEEHEEECCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCEEHHHH
EELRKADEGALMGEQIIGIFIGFSVFLGFLIGVGITSQTLRGAILSSIKEFASLRALGVS
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
MGALRLIVMELSIWVGLVGLVATGLLTFGIYLLAANGGLPMGFPTPWVIGVSILLIAISC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHH
ASGLLALGILKKSQPADLLR
HHHHHHHHHHCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA