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The map label for this gene is flgD [H]

Identifier: 197104254

GI number: 197104254

Start: 868168

End: 868860

Strand: Reverse

Name: flgD [H]

Synonym: PHZ_c0788

Alternate gene names: 197104254

Gene position: 868860-868168 (Counterclockwise)

Preceding gene: 197104255

Following gene: 197104253

Centisome position: 21.74

GC content: 66.67

Gene sequence:

>693_bases
ATGGCTGTTGGCGGCGTTTCCGGGATCACGGACACCAGCGCGATCGGCCGCACCCGGCTGGCCGAGAGCTTCGACACGTT
CCTCGCGCTGCTGACCACGCAGCTGAAGAACCAGGACCCGCTGTCGCCGCTGGATTCCAACCAGTTCACCCAGCAGATCG
TCCAGATGACGGGCGTGGAGCAGCAGTTGCTCACCAACGACCTGCTGAAGTCCCTGGTGTCCAACACCAGCAACGGCGTG
TCGACCGCCGTCAGCCTGATCGGCAAGGAGGTGCGCGCCGCCACCGTCGACGCCAAGCTGAAGGACGGGCAAGCCGCGTG
GATCTACACCCTGCCGCGCGACGCCAACGACGTGAAGCTCGAGGTCGTCGACAGCAACGGCAAGACGGTGCGCACGCTCT
CGGCGGCCGAGGACGGCCGCAAGGCCGGCGATCACAAGGTGACCTGGGACGGCAAGGACGCCAACGGCGTGAAGCTGCCG
GACGGCGGCGTCTACAGCCTGAAGGTCAGCGCCAAGGATTCCGACTTCGCCACCGTCCCCTCCACCGTCTCGATCGAAGG
GATCGTGACGGGCGTGGAGCAGTCGAACGGCGAGACCCTGATCACCGTCAACGGGACCCCGGTCCTGTGGAACCACATCA
CCACCATCAAGCAGCCGCAGCCTGCGACGCCCCCGTCGGAGGACGCTGCGTGA

Upstream 100 bases:

>100_bases
CAGGCGCTGGAGACGGCCGGCGAGGCCGACCTGGCCGCAACCTCGGGCGAGCTTCGCCTGCGCCGGGGCGTGACCGGCGG
CGTGGACGTGAGGATCTGAG

Downstream 100 bases:

>100_bases
AACGACAACCCGGACGGCAAAACGTCGTCTCCAACGGCGGCTTCGAAAGCCGACCCTCCGCAGGACGCGGACTCCATGGA
GAAGAACGGAAGTAAGCCAT

Product: flagellar hook assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 229

Protein sequence:

>230_residues
MAVGGVSGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVEQQLLTNDLLKSLVSNTSNGV
STAVSLIGKEVRAATVDAKLKDGQAAWIYTLPRDANDVKLEVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLP
DGGVYSLKVSAKDSDFATVPSTVSIEGIVTGVEQSNGETLITVNGTPVLWNHITTIKQPQPATPPSEDAA

Sequences:

>Translated_230_residues
MAVGGVSGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVEQQLLTNDLLKSLVSNTSNGV
STAVSLIGKEVRAATVDAKLKDGQAAWIYTLPRDANDVKLEVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLP
DGGVYSLKVSAKDSDFATVPSTVSIEGIVTGVEQSNGETLITVNGTPVLWNHITTIKQPQPATPPSEDAA
>Mature_229_residues
AVGGVSGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVEQQLLTNDLLKSLVSNTSNGVS
TAVSLIGKEVRAATVDAKLKDGQAAWIYTLPRDANDVKLEVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLPD
GGVYSLKVSAKDSDFATVPSTVSIEGIVTGVEQSNGETLITVNGTPVLWNHITTIKQPQPATPPSEDAA

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=157, Percent_Identity=35.031847133758, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 24233; Mature: 24102

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVGGVSGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH
QQLLTNDLLKSLVSNTSNGVSTAVSLIGKEVRAATVDAKLKDGQAAWIYTLPRDANDVKL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEECCCCEEEEEECCCCCCCEEE
EVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLPDGGVYSLKVSAKDSDFATVP
EEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEECC
STVSIEGIVTGVEQSNGETLITVNGTPVLWNHITTIKQPQPATPPSEDAA
CEEEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AVGGVSGITDTSAIGRTRLAESFDTFLALLTTQLKNQDPLSPLDSNQFTQQIVQMTGVE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCH
QQLLTNDLLKSLVSNTSNGVSTAVSLIGKEVRAATVDAKLKDGQAAWIYTLPRDANDVKL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHEEECCEECCCCEEEEEECCCCCCCEEE
EVVDSNGKTVRTLSAAEDGRKAGDHKVTWDGKDANGVKLPDGGVYSLKVSAKDSDFATVP
EEECCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCEECC
STVSIEGIVTGVEQSNGETLITVNGTPVLWNHITTIKQPQPATPPSEDAA
CEEEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]