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The map label for this gene is ybhS [H]

Identifier: 197104181

GI number: 197104181

Start: 787167

End: 788300

Strand: Reverse

Name: ybhS [H]

Synonym: PHZ_c0715

Alternate gene names: 197104181

Gene position: 788300-787167 (Counterclockwise)

Preceding gene: 197104182

Following gene: 197104180

Centisome position: 19.73

GC content: 70.11

Gene sequence:

>1134_bases
ATGACCGGCCTGTCCTGGACCCGCGTGATCGCGGTGATGGTCAAGGAGTTCAAGCAGCTCACCCGCGACCGGATCACCTA
CGCCATGATGCTGCTGATCCCGGTGATCCAGCTGGCGCTGTTCGGCTACGCCATCAACACCGAGCCGCGCCACCTGCCGA
CGGCGGTGCTGGCGCTGGAGGACAGCCGCTACGCCCGCTCGATCGTGGCCGGGCTGAAGAACTCGCTCTACTTCGACTTC
GTCGCCCAGGCGCGCAGCCCGGCCGAGCTGGACGCCATGATCCGCCGCGGCGACGTGCAGTTCGCGGTGACCATCCCCGG
CGACTTCAGCCGCCGCGTGGCGCGCGGCGATGCGGCCCAGATCCTGGTGGAGGCCGACGCCACCGACCCGTCGGCCACCG
GCGGGGCGGTCGCCGCCCTGGCCGCCCTGCCCGACGGGGTGCTGGCGCAGGACCTGAAGGGGGCGCTCGCCGCCCGCGGC
CAGGACCTGCCCCCCTTCGAGGTGGTCGTGCACCGCCGGTACAATCCCGAGGCCGTCACCTCGTACAACATCGTGCCGGG
GCTGCTCGGTGTGATCCTGTCGCTGACCCTGGTGATGATGACCGCGCTGTCGGTCACCCGTGAGACCGAGCGCGGCACCA
TGGAGACCCTGCTCGCGACCCCGCTCGAGCCGCTGGAGGTGATGATCGGCAAGCTCGCCCCCTACGTGCTGGTGGGGCTG
ATCCAGACGGTGCTGATCCTCATCCTGTCGAAGGTGCTGTTCCAGGTGCCGATGGCCGGCGGCTGGCCCGGCCTCGTGCT
GGGCGTCACCCTGTTCATCGTCGGCTCGCTGGCGCTGGGCTTCCTGATCTCCACCGTGGCGCGCTCGCAGCTGCAGGCGA
TGCAGATGAGCTTCTTCTACATCCTGCCCTCGATCCTGCTGTCCGGCTTCATGTTCCCCTTCCGCGGCATGCCCGGCTGG
GCGCAGGCGATCGGCGAGGTCATCCCGGTGACCCATTTCCTGCGGGTGGTGCGCGGCTCGCTGCTGAAGGGCCAAGGGCT
GGAGGACCAGTGGCGCGAGCTCGCCGCGCTCCTGGCGTTCGTGCTGGTGGTCACGGCCCTGGCCGTCGCCCGCTACCGCC
GCACGCTCGACTAG

Upstream 100 bases:

>100_bases
TCGCGCCGATGCGCCGCGAGCCCTGGCGTTGGACCGAGGTCCCGCCGACGCTCGAGGACGTCTTCATCCAGCTGATGGGC
CGCTCCGAGGACAACTTCCG

Downstream 100 bases:

>100_bases
GCCTATAGAGCGCAGATGATCGGCATCCTCTGCGCCACGCCCGAAGAACTCGCCGCCTTGCGCGCCGTCCTCGACCTCGA
GGTCGAACCGGAGGCGCACG

Product: ABC-type multidrug transport system, permease component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MTGLSWTRVIAVMVKEFKQLTRDRITYAMMLLIPVIQLALFGYAINTEPRHLPTAVLALEDSRYARSIVAGLKNSLYFDF
VAQARSPAELDAMIRRGDVQFAVTIPGDFSRRVARGDAAQILVEADATDPSATGGAVAALAALPDGVLAQDLKGALAARG
QDLPPFEVVVHRRYNPEAVTSYNIVPGLLGVILSLTLVMMTALSVTRETERGTMETLLATPLEPLEVMIGKLAPYVLVGL
IQTVLILILSKVLFQVPMAGGWPGLVLGVTLFIVGSLALGFLISTVARSQLQAMQMSFFYILPSILLSGFMFPFRGMPGW
AQAIGEVIPVTHFLRVVRGSLLKGQGLEDQWRELAALLAFVLVVTALAVARYRRTLD

Sequences:

>Translated_377_residues
MTGLSWTRVIAVMVKEFKQLTRDRITYAMMLLIPVIQLALFGYAINTEPRHLPTAVLALEDSRYARSIVAGLKNSLYFDF
VAQARSPAELDAMIRRGDVQFAVTIPGDFSRRVARGDAAQILVEADATDPSATGGAVAALAALPDGVLAQDLKGALAARG
QDLPPFEVVVHRRYNPEAVTSYNIVPGLLGVILSLTLVMMTALSVTRETERGTMETLLATPLEPLEVMIGKLAPYVLVGL
IQTVLILILSKVLFQVPMAGGWPGLVLGVTLFIVGSLALGFLISTVARSQLQAMQMSFFYILPSILLSGFMFPFRGMPGW
AQAIGEVIPVTHFLRVVRGSLLKGQGLEDQWRELAALLAFVLVVTALAVARYRRTLD
>Mature_376_residues
TGLSWTRVIAVMVKEFKQLTRDRITYAMMLLIPVIQLALFGYAINTEPRHLPTAVLALEDSRYARSIVAGLKNSLYFDFV
AQARSPAELDAMIRRGDVQFAVTIPGDFSRRVARGDAAQILVEADATDPSATGGAVAALAALPDGVLAQDLKGALAARGQ
DLPPFEVVVHRRYNPEAVTSYNIVPGLLGVILSLTLVMMTALSVTRETERGTMETLLATPLEPLEVMIGKLAPYVLVGLI
QTVLILILSKVLFQVPMAGGWPGLVLGVTLFIVGSLALGFLISTVARSQLQAMQMSFFYILPSILLSGFMFPFRGMPGWA
QAIGEVIPVTHFLRVVRGSLLKGQGLEDQWRELAALLAFVLVVTALAVARYRRTLD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787011, Length=349, Percent_Identity=32.9512893982808, Blast_Score=176, Evalue=3e-45,
Organism=Escherichia coli, GI1787010, Length=367, Percent_Identity=27.2479564032698, Blast_Score=158, Evalue=5e-40,
Organism=Escherichia coli, GI48994943, Length=368, Percent_Identity=30.4347826086957, Blast_Score=156, Evalue=3e-39,
Organism=Escherichia coli, GI226510979, Length=377, Percent_Identity=29.1777188328912, Blast_Score=120, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24650853, Length=375, Percent_Identity=22.9333333333333, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24650855, Length=375, Percent_Identity=22.9333333333333, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 40907; Mature: 40776

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLSWTRVIAVMVKEFKQLTRDRITYAMMLLIPVIQLALFGYAINTEPRHLPTAVLALE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEC
DSRYARSIVAGLKNSLYFDFVAQARSPAELDAMIRRGDVQFAVTIPGDFSRRVARGDAAQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHCCCHHE
ILVEADATDPSATGGAVAALAALPDGVLAQDLKGALAARGQDLPPFEVVVHRRYNPEAVT
EEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHC
SYNIVPGLLGVILSLTLVMMTALSVTRETERGTMETLLATPLEPLEVMIGKLAPYVLVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IQTVLILILSKVLFQVPMAGGWPGLVLGVTLFIVGSLALGFLISTVARSQLQAMQMSFFY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPSILLSGFMFPFRGMPGWAQAIGEVIPVTHFLRVVRGSLLKGQGLEDQWRELAALLAF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VLVVTALAVARYRRTLD
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TGLSWTRVIAVMVKEFKQLTRDRITYAMMLLIPVIQLALFGYAINTEPRHLPTAVLALE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEC
DSRYARSIVAGLKNSLYFDFVAQARSPAELDAMIRRGDVQFAVTIPGDFSRRVARGDAAQ
CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHCCCHHE
ILVEADATDPSATGGAVAALAALPDGVLAQDLKGALAARGQDLPPFEVVVHRRYNPEAVT
EEEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHC
SYNIVPGLLGVILSLTLVMMTALSVTRETERGTMETLLATPLEPLEVMIGKLAPYVLVGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
IQTVLILILSKVLFQVPMAGGWPGLVLGVTLFIVGSLALGFLISTVARSQLQAMQMSFFY
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILPSILLSGFMFPFRGMPGWAQAIGEVIPVTHFLRVVRGSLLKGQGLEDQWRELAALLAF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
VLVVTALAVARYRRTLD
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]