| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is prs [H]
Identifier: 197104112
GI number: 197104112
Start: 694237
End: 695226
Strand: Reverse
Name: prs [H]
Synonym: PHZ_c0646
Alternate gene names: 197104112
Gene position: 695226-694237 (Counterclockwise)
Preceding gene: 197104113
Following gene: 197104110
Centisome position: 17.4
GC content: 75.15
Gene sequence:
>990_bases ATGAGCGGCCTTCCGTCGACCGTGCGCCTGTTCGCGCTGAACGCCACGGCCGAGCTCGGCGCGGCGATCGCCAGCGCCGC GGGCCGGCCCCTCACGCCGCACGAGGAGCGCGAATTCGAGGACGGCGAACACAAGGCCCGGCCGCTGGAGTCCGTCGCCG GCGCCGACTGCTACGTGATCCAGAGCCTGCACGGCGGCCCGGACCAGAGCGCCAACGACAAGCTCTGCCGCCTGCTGTTC TTCATCGGCGCTCTGAAGGACGCGGGCGCGGCGCGGGTGACCGCCGTCGCGCCCTACCTCTGCTATGCGCGCAAGGACGT GCGCACCAAGCCGTTCGACCCCGTCACCGTCCGCTATGTGGCGTCGCTGTTCGAGGCGGTGGGGACCGATGCGGTCGTCG CGCTGGAGGTCCACAACCCGGCCGCGTTCGAGAACGCCTTCCGCCGGCGGGCGATCGCGCTGTCGGCCGCGCCGCTGTTC CTGGATCTGGCGGCCGGCCTCGCCGACGGCCCGGTCTGCGTGCTCTCGCCCGACCCGGGCGGGGCCAAGCGCGCCGAGCT GTTCCGCCAGGCGCTGGAGGCCCGCCTCGGCCGCCCGGTCGGCAAGGCATTCGCCGACAAGCACCGCAGCGGCGGCGTGG TCACCGGCGACCTGCTGGTGGGCGACGTCCGGGACGCCGCCGTCTTCGTCGTGGACGACCTGATCAGCACCGGCGGCACC ATCGCCCGCGCCGCCCGCTCGGCCCGGGCCGCGGGCGCCCGGCGCGTCGTGGCGCTGGCCGCCCACGGCCTCTTCATGCC GGGCGCCGCCGAGGTCCTGGCCGACCCGGCGGTGGAGCGCATCGTGGTCGCCGACGCCGCGCCGCCGTCCCGCATCGCCG GATCGCCGCTGCAGGCCAAGGTCGAGGCGCTCGCCAGCGCGCCGCTGCTGGCCGAGGCGATCCGGCGGCTGGCCTGCGAT GAGGCGCTTACCGACCTGATGGTGTTCTGA
Upstream 100 bases:
>100_bases ACGCCTGCCGGGCCCTCGACGTGGACGGCTCCGAGGCCGAGGCGCGGCGGCGGCTGGGCGAGGCCGACGTGCGGTTCTCA CGCGCTGAAGAGCTCAGGCC
Downstream 100 bases:
>100_bases GCCGCCGCTCCAACTGGCGGGCGTCGCGGGCCGCGAGCGCCAGGTAGGCCCTCGCCTGCCGCGGCCATTTCTCGGGGGTG CGCGGGTTCGGCTCCAGCAG
Product: ribose-phosphate pyrophosphokinase
Products: NA
Alternate protein names: RPPK; Phosphoribosyl pyrophosphate synthase; P-Rib-PP synthase; PRPP synthase [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MSGLPSTVRLFALNATAELGAAIASAAGRPLTPHEEREFEDGEHKARPLESVAGADCYVIQSLHGGPDQSANDKLCRLLF FIGALKDAGAARVTAVAPYLCYARKDVRTKPFDPVTVRYVASLFEAVGTDAVVALEVHNPAAFENAFRRRAIALSAAPLF LDLAAGLADGPVCVLSPDPGGAKRAELFRQALEARLGRPVGKAFADKHRSGGVVTGDLLVGDVRDAAVFVVDDLISTGGT IARAARSARAAGARRVVALAAHGLFMPGAAEVLADPAVERIVVADAAPPSRIAGSPLQAKVEALASAPLLAEAIRRLACD EALTDLMVF
Sequences:
>Translated_329_residues MSGLPSTVRLFALNATAELGAAIASAAGRPLTPHEEREFEDGEHKARPLESVAGADCYVIQSLHGGPDQSANDKLCRLLF FIGALKDAGAARVTAVAPYLCYARKDVRTKPFDPVTVRYVASLFEAVGTDAVVALEVHNPAAFENAFRRRAIALSAAPLF LDLAAGLADGPVCVLSPDPGGAKRAELFRQALEARLGRPVGKAFADKHRSGGVVTGDLLVGDVRDAAVFVVDDLISTGGT IARAARSARAAGARRVVALAAHGLFMPGAAEVLADPAVERIVVADAAPPSRIAGSPLQAKVEALASAPLLAEAIRRLACD EALTDLMVF >Mature_328_residues SGLPSTVRLFALNATAELGAAIASAAGRPLTPHEEREFEDGEHKARPLESVAGADCYVIQSLHGGPDQSANDKLCRLLFF IGALKDAGAARVTAVAPYLCYARKDVRTKPFDPVTVRYVASLFEAVGTDAVVALEVHNPAAFENAFRRRAIALSAAPLFL DLAAGLADGPVCVLSPDPGGAKRAELFRQALEARLGRPVGKAFADKHRSGGVVTGDLLVGDVRDAAVFVVDDLISTGGTI ARAARSARAAGARRVVALAAHGLFMPGAAEVLADPAVERIVVADAAPPSRIAGSPLQAKVEALASAPLLAEAIRRLACDE ALTDLMVF
Specific function: Utilized by both the de novo and the salvage pathways by which endogenously formed or exogenously added pyrimidine, purine, or pyridine bases are converted to the corresponding ribonucleoside monophosphates. [C]
COG id: COG0462
COG function: function code FE; Phosphoribosylpyrophosphate synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribose-phosphate pyrophosphokinase family [H]
Homologues:
Organism=Homo sapiens, GI4506129, Length=326, Percent_Identity=32.8220858895706, Blast_Score=137, Evalue=1e-32, Organism=Homo sapiens, GI4506127, Length=323, Percent_Identity=32.1981424148607, Blast_Score=137, Evalue=2e-32, Organism=Homo sapiens, GI84875539, Length=329, Percent_Identity=32.5227963525836, Blast_Score=133, Evalue=2e-31, Organism=Homo sapiens, GI28557709, Length=323, Percent_Identity=31.5789473684211, Blast_Score=130, Evalue=1e-30, Organism=Escherichia coli, GI1787458, Length=321, Percent_Identity=34.8909657320872, Blast_Score=151, Evalue=7e-38, Organism=Caenorhabditis elegans, GI25149168, Length=322, Percent_Identity=29.5031055900621, Blast_Score=118, Evalue=5e-27, Organism=Caenorhabditis elegans, GI17554702, Length=322, Percent_Identity=29.5031055900621, Blast_Score=117, Evalue=8e-27, Organism=Caenorhabditis elegans, GI71989924, Length=323, Percent_Identity=29.4117647058824, Blast_Score=117, Evalue=1e-26, Organism=Caenorhabditis elegans, GI17554704, Length=292, Percent_Identity=31.5068493150685, Blast_Score=116, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17570245, Length=308, Percent_Identity=24.3506493506494, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6320946, Length=326, Percent_Identity=30.9815950920245, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6319403, Length=324, Percent_Identity=31.1728395061728, Blast_Score=137, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6321776, Length=326, Percent_Identity=29.4478527607362, Blast_Score=123, Evalue=5e-29, Organism=Saccharomyces cerevisiae, GI6324511, Length=116, Percent_Identity=31.8965517241379, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6322667, Length=190, Percent_Identity=28.4210526315789, Blast_Score=70, Evalue=4e-13, Organism=Drosophila melanogaster, GI21355239, Length=328, Percent_Identity=29.8780487804878, Blast_Score=125, Evalue=3e-29, Organism=Drosophila melanogaster, GI45551540, Length=351, Percent_Identity=28.2051282051282, Blast_Score=115, Evalue=6e-26,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000842 - InterPro: IPR005946 - InterPro: IPR000836 [H]
Pfam domain/function: PF00156 Pribosyltran [H]
EC number: =2.7.6.1 [H]
Molecular weight: Translated: 34187; Mature: 34055
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: PS00144 ASN_GLN_ASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLPSTVRLFALNATAELGAAIASAAGRPLTPHEEREFEDGEHKARPLESVAGADCYVI CCCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCEEEE QSLHGGPDQSANDKLCRLLFFIGALKDAGAARVTAVAPYLCYARKDVRTKPFDPVTVRYV ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ASLFEAVGTDAVVALEVHNPAAFENAFRRRAIALSAAPLFLDLAAGLADGPVCVLSPDPG HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC GAKRAELFRQALEARLGRPVGKAFADKHRSGGVVTGDLLVGDVRDAAVFVVDDLISTGGT CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCEEEECCHHHHHHHHHHHHHCCCH IARAARSARAAGARRVVALAAHGLFMPGAAEVLADPAVERIVVADAAPPSRIAGSPLQAK HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHEEEEECCCCCHHHCCCCHHHH VEALASAPLLAEAIRRLACDEALTDLMVF HHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SGLPSTVRLFALNATAELGAAIASAAGRPLTPHEEREFEDGEHKARPLESVAGADCYVI CCCCCEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHCCHHHHCCCCEEEE QSLHGGPDQSANDKLCRLLFFIGALKDAGAARVTAVAPYLCYARKDVRTKPFDPVTVRYV ECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH ASLFEAVGTDAVVALEVHNPAAFENAFRRRAIALSAAPLFLDLAAGLADGPVCVLSPDPG HHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCC GAKRAELFRQALEARLGRPVGKAFADKHRSGGVVTGDLLVGDVRDAAVFVVDDLISTGGT CHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCEEEECCHHHHHHHHHHHHHCCCH IARAARSARAAGARRVVALAAHGLFMPGAAEVLADPAVERIVVADAAPPSRIAGSPLQAK HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCHHHHEEEEECCCCCHHHCCCCHHHH VEALASAPLLAEAIRRLACDEALTDLMVF HHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11792842 [H]