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The map label for this gene is ytfE [C]

Identifier: 197104082

GI number: 197104082

Start: 662462

End: 663073

Strand: Direct

Name: ytfE [C]

Synonym: PHZ_c0616

Alternate gene names: 197104082

Gene position: 662462-663073 (Clockwise)

Preceding gene: 197104080

Following gene: 197104083

Centisome position: 16.58

GC content: 70.59

Gene sequence:

>612_bases
GTGCTGTCTCCTTGGTGGGACAGGCGAGGCTGGGCGATTCCCGCGCAGGCGAATTTGTCGGGCCGCAAAGATCGGGCGGG
ACTCGGCGGACTAGATGAGGGCCGAATGGAGTTCTGTCCCATGCCCGCCGCCCAGCTTCCGCGGATGGAGATGTCCCGCG
CCGAGAGGCTCGAGGACGAGACCCTGATCCGCCTGATCATGCAGTACCACGACGCCCACGTCCGCGACCTGGCGTCGGCG
GCCCATACTGCCGAGATCGTCGCCGCCCGCCACGGGCCCGAATCGGGTTTCCCGCCCGCCCTGCCGGACGAGCTCGCGCG
GCTGCGCGAGACGCTGCAGGCGCACCAGCTGCGCGAGGAGGCGGTGCTGTTCCCGGTGATCCTGGAGGGCCGGGGCGAGA
CGCTGCGCTACCCGATCAAGGCGCTGGGCTCCGAGCACGACGACATGCAGGACGGGCTGGAGCGGCTGGTCCGGCTGACC
GGCGACTACGCCGCCCCCGCGGGCGCCTGCGCCACCTGGCGGGCGCTGTACGACCTGCTGCGCAAGTTCGACGGCGAGTT
CCGCGAGCACGTGCGGCTGGAAGAGCGGGTGCTTTTCCCGCGTTTCCAGTAA

Upstream 100 bases:

>100_bases
CCCAGGTGGCCTCCACGCTGCCGTCGCCCGCGCCGTCGGGCTGGGCGAAGCGGTACTTGCCGGACCAGATCTCGGCCGCG
AGCGGATTGTCGAACGCCAT

Downstream 100 bases:

>100_bases
GCGGCGCTTCAGAAAAACCGCCCGAGATTGTTCTGGCGCAAAGTGGAAAGAGGGGCGGCGGTCTAACCTTCAAAAGTCAG
GCGAAAGCAACGCCTAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: RCMNS [H]

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLSPWWDRRGWAIPAQANLSGRKDRAGLGGLDEGRMEFCPMPAAQLPRMEMSRAERLEDETLIRLIMQYHDAHVRDLASA
AHTAEIVAARHGPESGFPPALPDELARLRETLQAHQLREEAVLFPVILEGRGETLRYPIKALGSEHDDMQDGLERLVRLT
GDYAAPAGACATWRALYDLLRKFDGEFREHVRLEERVLFPRFQ

Sequences:

>Translated_203_residues
MLSPWWDRRGWAIPAQANLSGRKDRAGLGGLDEGRMEFCPMPAAQLPRMEMSRAERLEDETLIRLIMQYHDAHVRDLASA
AHTAEIVAARHGPESGFPPALPDELARLRETLQAHQLREEAVLFPVILEGRGETLRYPIKALGSEHDDMQDGLERLVRLT
GDYAAPAGACATWRALYDLLRKFDGEFREHVRLEERVLFPRFQ
>Mature_203_residues
MLSPWWDRRGWAIPAQANLSGRKDRAGLGGLDEGRMEFCPMPAAQLPRMEMSRAERLEDETLIRLIMQYHDAHVRDLASA
AHTAEIVAARHGPESGFPPALPDELARLRETLQAHQLREEAVLFPVILEGRGETLRYPIKALGSEHDDMQDGLERLVRLT
GDYAAPAGACATWRALYDLLRKFDGEFREHVRLEERVLFPRFQ

Specific function: Involved in anaerobic NO protection [H]

COG id: COG2846

COG function: function code D; Regulator of cell morphogenesis and NO signaling

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790654, Length=142, Percent_Identity=34.5070422535211, Blast_Score=98, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007500
- InterPro:   IPR019903
- InterPro:   IPR012312 [H]

Pfam domain/function: PF01814 Hemerythrin; PF04405 ScdA_N [H]

EC number: NA

Molecular weight: Translated: 23093; Mature: 23093

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSPWWDRRGWAIPAQANLSGRKDRAGLGGLDEGRMEFCPMPAAQLPRMEMSRAERLEDE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHCCHH
TLIRLIMQYHDAHVRDLASAAHTAEIVAARHGPESGFPPALPDELARLRETLQAHQLREE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVLFPVILEGRGETLRYPIKALGSEHDDMQDGLERLVRLTGDYAAPAGACATWRALYDLL
HHHHHHEECCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RKFDGEFREHVRLEERVLFPRFQ
HHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLSPWWDRRGWAIPAQANLSGRKDRAGLGGLDEGRMEFCPMPAAQLPRMEMSRAERLEDE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHHHHHHHCCHH
TLIRLIMQYHDAHVRDLASAAHTAEIVAARHGPESGFPPALPDELARLRETLQAHQLREE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
AVLFPVILEGRGETLRYPIKALGSEHDDMQDGLERLVRLTGDYAAPAGACATWRALYDLL
HHHHHHEECCCCCCEECCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
RKFDGEFREHVRLEERVLFPRFQ
HHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA