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The map label for this gene is 197104064

Identifier: 197104064

GI number: 197104064

Start: 638069

End: 639568

Strand: Reverse

Name: 197104064

Synonym: PHZ_c0598

Alternate gene names: NA

Gene position: 639568-638069 (Counterclockwise)

Preceding gene: 197104067

Following gene: 197104062

Centisome position: 16.0

GC content: 73.2

Gene sequence:

>1500_bases
GTGAAGCTTACATCGGACGAGATCGCCACGGTGGTCGAGCCGACCCTTGAGCGGCCCGACTTCGAGGCCGCCTTCCGCGC
GCTTCCCAGCCCCTACATGATCATCGATCGCGACCTGCGCTACGTCGAGGTCAACGACGCCTACTGCGCCACGCTGGAGC
GTCGGCGGGAGGACCTGGTCGGGCGCGGGCTCTTCGAGGTGTTCCCGAACCCCGGCCCCAGCGGGCGCCGCCTGCGCGAG
TCCTTCGAGCGCGTGTTCGAGACCGGGCGGCCGGACTCCATCCCGCTGATCCCCTATCCGATCGAGCGGCCCGCCAGCCG
CGGCGGCGGCTTCGCCCTGCGCTACTGGTCGGCCGCCCACGTCCCGCTGCCGGGCCCGGACGGCCGCGCCCGGTTCCTGA
TCCAGAACACGGTCGACGTCACCGAGCTGCAGCGGCTGAGGGAGATCGCCTACGGCCCCGGGGCCGACCCGGCGCCGCGT
CCCGGCGAGAAGGACATCCTGCTCCGCGCCCAGGAGGTGCAGGAGCTGAACCAGTCCCTGCTGCAGGAAAGCCAGGGGCT
GCGCGACCTGTTCATGCAGGCGCCCAGCTTCATCGCCGTGCTGACCGGGCCCGACCACGTCTTCGCCCTGGTCAACAACG
CCTACCTGCGGCTGATCGGCCACCGGCAGGTGATCGGCAAGCCGCTCGCCGAGGCCCTGCCCGAGGTGCTCGACCAGGGG
TTCCCGGACCTCCTGGAGACGGTCGTCCGCCAGCGCGAGCCGTACCTCGGACGCGCCGTCAGCGTCCGCCTGCAGAGGTC
GCCCGGCGCGCCTCTCGAGGAGCGGTTCCTCGACTTCGTCTACCAGCCCATTCTCGGCCCCGACGGCCAGGCCTGGGGCG
TGTTCGTGGAGGGCAGCGACGTCACCGACCGCGTGCTCGCCGAACGCCAGCAGAAGCTGCTGCTGGACGAGCTGAACCAC
CGGGTGAAGAACACCCTGGCCACCGTCCAGTCGATCGCCAGCCAGACCCTGCGCACCGCGCCGGACCCGGCGGCCTTCCG
CGAGGCGTTCGAGGCGCGGCTCATGGCCCTGTCGGCGACGCACGACCTCCTCACCGCCACCAGCTGGCGCAGCGCCCAGC
TGCGGGACGTGCTGCTCTCGGAAGTGCAGCCCCACGGCGCCGAGCGCTACAGCCTGAGCGGTCCCGACGTGGCGCTCGCC
CCCGCGCCGGCCGTCGCCCTGGGCCTGCTGGCGCACGAGCTCTCCACCAACGCGGCCAAGTACGGCGCCCTGTCGGTCCC
CGAAGGCCGCGTCTCGGTCGACTGGCGCGTCGAGGACGGGACGCTCGATCTGGCCTGGCGCGAGACCGGCGGGCCGCCGG
TGACGCCGCCGCAGCGGCGCGGCTTCGGCTCGCGGCTCATCGAGCGCAGCCTGGAGGGCGCCCTGGGCGGCGCGGCCGAA
CTGGACTTCGCCGCCGCGGGGCTCGTCTGCCGGGTGCGCCTGCCGCTGGACCGACGCTGA

Upstream 100 bases:

>100_bases
GGGCGGGAATATAGGCAGGTTCGCGCCGCGTCGGCAGGGCATGCGACCACGATGCAACCAGCTTCGCCGTTGCACGTTGG
GAGCAAATCGGGGGTTCAGC

Downstream 100 bases:

>100_bases
GGCCTCAGACCTTCACGCCGCCGGCGGCGATCTTGTCGAACACCGCCTTGGTGACCTTCACATAGCCCTTCTTGGGGTCG
TGGAAGTAGAGCGGCCCGCG

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MKLTSDEIATVVEPTLERPDFEAAFRALPSPYMIIDRDLRYVEVNDAYCATLERRREDLVGRGLFEVFPNPGPSGRRLRE
SFERVFETGRPDSIPLIPYPIERPASRGGGFALRYWSAAHVPLPGPDGRARFLIQNTVDVTELQRLREIAYGPGADPAPR
PGEKDILLRAQEVQELNQSLLQESQGLRDLFMQAPSFIAVLTGPDHVFALVNNAYLRLIGHRQVIGKPLAEALPEVLDQG
FPDLLETVVRQREPYLGRAVSVRLQRSPGAPLEERFLDFVYQPILGPDGQAWGVFVEGSDVTDRVLAERQQKLLLDELNH
RVKNTLATVQSIASQTLRTAPDPAAFREAFEARLMALSATHDLLTATSWRSAQLRDVLLSEVQPHGAERYSLSGPDVALA
PAPAVALGLLAHELSTNAAKYGALSVPEGRVSVDWRVEDGTLDLAWRETGGPPVTPPQRRGFGSRLIERSLEGALGGAAE
LDFAAAGLVCRVRLPLDRR

Sequences:

>Translated_499_residues
MKLTSDEIATVVEPTLERPDFEAAFRALPSPYMIIDRDLRYVEVNDAYCATLERRREDLVGRGLFEVFPNPGPSGRRLRE
SFERVFETGRPDSIPLIPYPIERPASRGGGFALRYWSAAHVPLPGPDGRARFLIQNTVDVTELQRLREIAYGPGADPAPR
PGEKDILLRAQEVQELNQSLLQESQGLRDLFMQAPSFIAVLTGPDHVFALVNNAYLRLIGHRQVIGKPLAEALPEVLDQG
FPDLLETVVRQREPYLGRAVSVRLQRSPGAPLEERFLDFVYQPILGPDGQAWGVFVEGSDVTDRVLAERQQKLLLDELNH
RVKNTLATVQSIASQTLRTAPDPAAFREAFEARLMALSATHDLLTATSWRSAQLRDVLLSEVQPHGAERYSLSGPDVALA
PAPAVALGLLAHELSTNAAKYGALSVPEGRVSVDWRVEDGTLDLAWRETGGPPVTPPQRRGFGSRLIERSLEGALGGAAE
LDFAAAGLVCRVRLPLDRR
>Mature_499_residues
MKLTSDEIATVVEPTLERPDFEAAFRALPSPYMIIDRDLRYVEVNDAYCATLERRREDLVGRGLFEVFPNPGPSGRRLRE
SFERVFETGRPDSIPLIPYPIERPASRGGGFALRYWSAAHVPLPGPDGRARFLIQNTVDVTELQRLREIAYGPGADPAPR
PGEKDILLRAQEVQELNQSLLQESQGLRDLFMQAPSFIAVLTGPDHVFALVNNAYLRLIGHRQVIGKPLAEALPEVLDQG
FPDLLETVVRQREPYLGRAVSVRLQRSPGAPLEERFLDFVYQPILGPDGQAWGVFVEGSDVTDRVLAERQQKLLLDELNH
RVKNTLATVQSIASQTLRTAPDPAAFREAFEARLMALSATHDLLTATSWRSAQLRDVLLSEVQPHGAERYSLSGPDVALA
PAPAVALGLLAHELSTNAAKYGALSVPEGRVSVDWRVEDGTLDLAWRETGGPPVTPPQRRGFGSRLIERSLEGALGGAAE
LDFAAAGLVCRVRLPLDRR

Specific function: Photosensitive kinase that is involved in increased bacterial virulence upon exposure to light [H]

COG id: COG3920

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013767
- InterPro:   IPR013655
- InterPro:   IPR011102 [H]

Pfam domain/function: PF07536 HWE_HK; PF00989 PAS; PF08447 PAS_3 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 55052; Mature: 55052

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTSDEIATVVEPTLERPDFEAAFRALPSPYMIIDRDLRYVEVNDAYCATLERRREDLV
CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHH
GRGLFEVFPNPGPSGRRLRESFERVFETGRPDSIPLIPYPIERPASRGGGFALRYWSAAH
HCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
VPLPGPDGRARFLIQNTVDVTELQRLREIAYGPGADPAPRPGEKDILLRAQEVQELNQSL
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LQESQGLRDLFMQAPSFIAVLTGPDHVFALVNNAYLRLIGHRQVIGKPLAEALPEVLDQG
HHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
FPDLLETVVRQREPYLGRAVSVRLQRSPGAPLEERFLDFVYQPILGPDGQAWGVFVEGSD
CHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
VTDRVLAERQQKLLLDELNHRVKNTLATVQSIASQTLRTAPDPAAFREAFEARLMALSAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HDLLTATSWRSAQLRDVLLSEVQPHGAERYSLSGPDVALAPAPAVALGLLAHELSTNAAK
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHCCHHH
YGALSVPEGRVSVDWRVEDGTLDLAWRETGGPPVTPPQRRGFGSRLIERSLEGALGGAAE
CCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCHH
LDFAAAGLVCRVRLPLDRR
HHHHHCCEEEEEECCCCCC
>Mature Secondary Structure
MKLTSDEIATVVEPTLERPDFEAAFRALPSPYMIIDRDLRYVEVNDAYCATLERRREDLV
CCCCHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEECCCEEEEECCHHHHHHHHHHHHHH
GRGLFEVFPNPGPSGRRLRESFERVFETGRPDSIPLIPYPIERPASRGGGFALRYWSAAH
HCCHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
VPLPGPDGRARFLIQNTVDVTELQRLREIAYGPGADPAPRPGEKDILLRAQEVQELNQSL
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
LQESQGLRDLFMQAPSFIAVLTGPDHVFALVNNAYLRLIGHRQVIGKPLAEALPEVLDQG
HHHHCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
FPDLLETVVRQREPYLGRAVSVRLQRSPGAPLEERFLDFVYQPILGPDGQAWGVFVEGSD
CHHHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCC
VTDRVLAERQQKLLLDELNHRVKNTLATVQSIASQTLRTAPDPAAFREAFEARLMALSAT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
HDLLTATSWRSAQLRDVLLSEVQPHGAERYSLSGPDVALAPAPAVALGLLAHELSTNAAK
HHHHHHCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEECCCHHHHHHHHHHHHHCCHHH
YGALSVPEGRVSVDWRVEDGTLDLAWRETGGPPVTPPQRRGFGSRLIERSLEGALGGAAE
CCCCCCCCCCEEEEEEEECCEEEEEEECCCCCCCCCCHHCCHHHHHHHHHHHHHCCCCHH
LDFAAAGLVCRVRLPLDRR
HHHHHCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA