| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is cyp126 [H]
Identifier: 197104060
GI number: 197104060
Start: 632627
End: 633823
Strand: Reverse
Name: cyp126 [H]
Synonym: PHZ_c0594
Alternate gene names: 197104060
Gene position: 633823-632627 (Counterclockwise)
Preceding gene: 197104062
Following gene: 197104059
Centisome position: 15.86
GC content: 72.35
Gene sequence:
>1197_bases ATGGAGATCGATCTCCTGTCGCCGGCGAGCTTCGCGGGCGGCCAGCCGCACGCCCAGTTCGCCTGGCTGCGCGAGCATGC GCCGGTCTTCCGGCACGCCGAGCCGGACGGGCCCGGCTTCTGGGCCGTGACCCGCCACGCCGACGTGCGGGCGGTGGACC GCGACTTCCAGACGTTCTCGTCCGAGCCGACGGTGATGATCCCCGACCCGGCGGCCGAGGCGGCGGCGGCCTTCGGCCCC TACAAGATGATGCTGATGATGGATCCGCCGGAGCACACCGCGTTCCGCAAGCTGATCCGCTCCGAGTTCACCGAGCCGCA GGCGCGCCTGCGCGCCGAGCGCATCCGGGCCCTGGCGCGGCAGATCGTCGACGCCGTGGTCCACAAGGGCGAGTGCGACT TCGTGGCCGAGGTGGCCGGCGAGATGCCCAGCTTCGTCATCGCCGAACTGATGGGCCTGCCGCTGGACGACGGGCGCGAG CTCTACAAGCTGACCGAGACCATCCACACCGCCCCGGAAGCCCTGCCGCCCGGCGCCGGCGCCGCGGCGGTGATGAAGAT GTTCGAGTACGGCGCGCAGGTGATGGCCCAGAAGCGGGCGAGGCCCGGCGACGACCTGGCCTCGCGCCTGCTGGCCTGCG AGGTGGACGGCCGGCGGCTGGAGGACATGGAGTTCCTGCTGTTCTTCCTGCTGCTGATCGACGCCGGCGGCGACACCACC CGCAACCTGCTGTCGGGCGGGCTGCTGGCGCTGATGGAGCATCCGGAGCAGCTGGCCTGGCTGACGGCGGACCTGCCCGC CCGCCTGCCCGCCGCCCGCGAGGAGCTGCTGCGGTACGTGAGCCCGGTGATCTACATGCGCCGCACCGCCCGGCGCGACG TCGAGCTGGGCGGCCGGCGGATCGCGGCGGGCGACAAGGTGGTGATGTACTTCGGCGCGGCCAACCGCGACCCCGCGGCG ATCGAGCGCCCGGACGCGCTGGACCTGTCGCGGGAAGAGACCGCGCACCTGGCGTTCGGCAACGGCCCGCACGTGTGCCT GGGCCAGCACATCGCCCGCGTCGAGATCGACGCCATGCTGGAGGAAGTGCTGTCGCGGATGACCGACTTCGCCCCGGCCG GCGAGGTGGAGTGGCTGGCGTCGAACTTCATCTCGGGACCGAAGGTCATGCCGCTGCGCTTCCGGGCGGCGGCTTAG
Upstream 100 bases:
>100_bases GCCCGGGAAGTCAAATCACGGCTTCGCGGCGCGATGCGGATTGCCTGACGGCGGGGAAGGCCGCGTCCTATCGGCGGAAC AAATACGGGGAGGATGGGCG
Downstream 100 bases:
>100_bases GGGGGCGGTCGGATGGAAAGGCCCCAGAGGGACGAGGCGCTGCGGGCGGCCTACGGCCAGGTGGCGGACGATCCGGCGCG GGCGACGTCGCTGCCGGCGG
Product: cytochrome P450 CYP125
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MEIDLLSPASFAGGQPHAQFAWLREHAPVFRHAEPDGPGFWAVTRHADVRAVDRDFQTFSSEPTVMIPDPAAEAAAAFGP YKMMLMMDPPEHTAFRKLIRSEFTEPQARLRAERIRALARQIVDAVVHKGECDFVAEVAGEMPSFVIAELMGLPLDDGRE LYKLTETIHTAPEALPPGAGAAAVMKMFEYGAQVMAQKRARPGDDLASRLLACEVDGRRLEDMEFLLFFLLLIDAGGDTT RNLLSGGLLALMEHPEQLAWLTADLPARLPAAREELLRYVSPVIYMRRTARRDVELGGRRIAAGDKVVMYFGAANRDPAA IERPDALDLSREETAHLAFGNGPHVCLGQHIARVEIDAMLEEVLSRMTDFAPAGEVEWLASNFISGPKVMPLRFRAAA
Sequences:
>Translated_398_residues MEIDLLSPASFAGGQPHAQFAWLREHAPVFRHAEPDGPGFWAVTRHADVRAVDRDFQTFSSEPTVMIPDPAAEAAAAFGP YKMMLMMDPPEHTAFRKLIRSEFTEPQARLRAERIRALARQIVDAVVHKGECDFVAEVAGEMPSFVIAELMGLPLDDGRE LYKLTETIHTAPEALPPGAGAAAVMKMFEYGAQVMAQKRARPGDDLASRLLACEVDGRRLEDMEFLLFFLLLIDAGGDTT RNLLSGGLLALMEHPEQLAWLTADLPARLPAAREELLRYVSPVIYMRRTARRDVELGGRRIAAGDKVVMYFGAANRDPAA IERPDALDLSREETAHLAFGNGPHVCLGQHIARVEIDAMLEEVLSRMTDFAPAGEVEWLASNFISGPKVMPLRFRAAA >Mature_398_residues MEIDLLSPASFAGGQPHAQFAWLREHAPVFRHAEPDGPGFWAVTRHADVRAVDRDFQTFSSEPTVMIPDPAAEAAAAFGP YKMMLMMDPPEHTAFRKLIRSEFTEPQARLRAERIRALARQIVDAVVHKGECDFVAEVAGEMPSFVIAELMGLPLDDGRE LYKLTETIHTAPEALPPGAGAAAVMKMFEYGAQVMAQKRARPGDDLASRLLACEVDGRRLEDMEFLLFFLLLIDAGGDTT RNLLSGGLLALMEHPEQLAWLTADLPARLPAAREELLRYVSPVIYMRRTARRDVELGGRRIAAGDKVVMYFGAANRDPAA IERPDALDLSREETAHLAFGNGPHVCLGQHIARVEIDAMLEEVLSRMTDFAPAGEVEWLASNFISGPKVMPLRFRAAA
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 43893; Mature: 43893
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIDLLSPASFAGGQPHAQFAWLREHAPVFRHAEPDGPGFWAVTRHADVRAVDRDFQTFS CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHC SEPTVMIPDPAAEAAAAFGPYKMMLMMDPPEHTAFRKLIRSEFTEPQARLRAERIRALAR CCCCEEECCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QIVDAVVHKGECDFVAEVAGEMPSFVIAELMGLPLDDGRELYKLTETIHTAPEALPPGAG HHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC AAAVMKMFEYGAQVMAQKRARPGDDLASRLLACEVDGRRLEDMEFLLFFLLLIDAGGDTT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH RNLLSGGLLALMEHPEQLAWLTADLPARLPAAREELLRYVSPVIYMRRTARRDVELGGRR HHHHHCCHHHHHHCHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IAAGDKVVMYFGAANRDPAAIERPDALDLSREETAHLAFGNGPHVCLGQHIARVEIDAML EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH EEVLSRMTDFAPAGEVEWLASNFISGPKVMPLRFRAAA HHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCC >Mature Secondary Structure MEIDLLSPASFAGGQPHAQFAWLREHAPVFRHAEPDGPGFWAVTRHADVRAVDRDFQTFS CCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHC SEPTVMIPDPAAEAAAAFGPYKMMLMMDPPEHTAFRKLIRSEFTEPQARLRAERIRALAR CCCCEEECCCHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH QIVDAVVHKGECDFVAEVAGEMPSFVIAELMGLPLDDGRELYKLTETIHTAPEALPPGAG HHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCC AAAVMKMFEYGAQVMAQKRARPGDDLASRLLACEVDGRRLEDMEFLLFFLLLIDAGGDTT HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHH RNLLSGGLLALMEHPEQLAWLTADLPARLPAAREELLRYVSPVIYMRRTARRDVELGGRR HHHHHCCHHHHHHCHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IAAGDKVVMYFGAANRDPAAIERPDALDLSREETAHLAFGNGPHVCLGQHIARVEIDAML EECCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHH EEVLSRMTDFAPAGEVEWLASNFISGPKVMPLRFRAAA HHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]