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The map label for this gene is tldD [H]

Identifier: 197104007

GI number: 197104007

Start: 571612

End: 573042

Strand: Reverse

Name: tldD [H]

Synonym: PHZ_c0541

Alternate gene names: 197104007

Gene position: 573042-571612 (Counterclockwise)

Preceding gene: 197104019

Following gene: 197104006

Centisome position: 14.34

GC content: 72.33

Gene sequence:

>1431_bases
ATGAACGCGCACGCCCCCTCCCCCTCCATCCTCGAGTCCGCCGGCGTCGATTCCGGCCGCGCCCGCGAAATCCTCGGCCA
GGCCCTCGCCGGCGCCGACGATGGGGAGCTGTTCGTCGAGCGCTCGGAAAGCGAGTCGTTCCTGTTCGACGACGGGCGGC
TGAAGTCGGCGGCCTACGACGCCACCGAAGGGTTCGGCCTGCGGGTGGTGGCGGGCGAGACCGCCGGCTACGCCCACGCC
AGCGAAATCTCCGAGGCCGCCATCCGCCGGGCCGCGGACTCGGCCGCGCTCGCCAAGCGGGGCTACGAGGGCGTCGCCGC
AGAAGGGCCACGGGCGACCAACGCCAAGCTCTACGCCGAGGACGATCCGCTCGCCTCGCCCGACTTCTCGGACAAGGTGG
CCCTGCTGCAGGAGATCGACGCCTGGGCCCGCGCCCGCGATCCGCGCATCGCCCAGGTGATGGTCAGCCTCGCGGGCGAG
CGGCGCACGGTCGAGATCGTGCGCGCCGACGGGCGGCTGATCCGCGACGTGCGCCCCCTGTCCCGGATCAACGTCCAGGT
CACGGTCGAGCGCGATGGCCGGCGCGAGAACGGCTACACGGGGGCCGGCGGCCGAGCCGGGTTCGAGACCTGGATCACCG
CCGACAAGTGGCAGGCCCAGGTGGACGAAGCGCTGCGCCAGGCGCTGGTGAACCTAGACGCCGTGCCCTGCCCCGCCGGC
GAGATGGACGTGGTCCTGGGCCCCGGCTGGAACGGCGTGCTGCTGCACGAGGCGGTGGGCCACGGCCTGGAGGGCGACTT
CAATCGCAAGGGCACCTCGGCCTTCTCGGGCAAGATCGGCGAGCGGGTCGCCGCCCCCGGCGTGACCGTCTTCGACGACG
GGGCGATCGCCGGCCGCCGCGGCTCGCTGACCGTGGACGACGAGGGCACCCCGACCCAGCGCACCCTCCTGATCGAGGAC
GGCGTCCTGGTGGGCTACATGCACGACCGGATGAGCGCGCGGCTGATGGGGCTGTCGCCCACCGGCAACGCGCGCCGGCA
GTCCTACGCCCACATGCCCATGCCCCGGATGACCAACACCGGCATGCTGGGCGGCGACACGCCGCGCGAGGAGATGATCG
CCTCGACGAAGCGGGGGCTCTACTGCGCCAACTTCGGCGGCGGCCAGGTGGACATCACCAACGGCAAGTTCGTCTTCCAG
TGCACCGAGGCGTACCTGATCGAGGACGGCAAGCTGACCACGCCGGTGAAGGGCGCCACCCTGATCGGCGACGGCCCGTC
GGCCCTGACCCGCGTCACCATGCTGGGCGACGACTTCGCCTTCGATCCCGGCATCGGGGTGTGCGGCAAGTCGGGCCAGA
GCGTCCCGGTCGGCGTCGGCCAGCCCTCGCTGAAGATCACCGGCCTGACGGTGGGCGGCACCAGCGTCTAG

Upstream 100 bases:

>100_bases
GAACCGGCATGCGACTCGCCGCCGCTGTCGAAGGGGGCCCGTCGAACGGGGCGACGAAAGGGCCGGTGACGCGGGCCGGC
CGGCTTCCTATCTTGCGGCC

Downstream 100 bases:

>100_bases
GGAAATCCTTCCCCATCAGGCGGAGGGACGCCGACGGCCCGGCGCCTTGACGGACCTTACGGGCATTTAATTGGCCTCCC
CGGCGTAACGCGGTTCACCT

Product: predicted Zn-dependent protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MNAHAPSPSILESAGVDSGRAREILGQALAGADDGELFVERSESESFLFDDGRLKSAAYDATEGFGLRVVAGETAGYAHA
SEISEAAIRRAADSAALAKRGYEGVAAEGPRATNAKLYAEDDPLASPDFSDKVALLQEIDAWARARDPRIAQVMVSLAGE
RRTVEIVRADGRLIRDVRPLSRINVQVTVERDGRRENGYTGAGGRAGFETWITADKWQAQVDEALRQALVNLDAVPCPAG
EMDVVLGPGWNGVLLHEAVGHGLEGDFNRKGTSAFSGKIGERVAAPGVTVFDDGAIAGRRGSLTVDDEGTPTQRTLLIED
GVLVGYMHDRMSARLMGLSPTGNARRQSYAHMPMPRMTNTGMLGGDTPREEMIASTKRGLYCANFGGGQVDITNGKFVFQ
CTEAYLIEDGKLTTPVKGATLIGDGPSALTRVTMLGDDFAFDPGIGVCGKSGQSVPVGVGQPSLKITGLTVGGTSV

Sequences:

>Translated_476_residues
MNAHAPSPSILESAGVDSGRAREILGQALAGADDGELFVERSESESFLFDDGRLKSAAYDATEGFGLRVVAGETAGYAHA
SEISEAAIRRAADSAALAKRGYEGVAAEGPRATNAKLYAEDDPLASPDFSDKVALLQEIDAWARARDPRIAQVMVSLAGE
RRTVEIVRADGRLIRDVRPLSRINVQVTVERDGRRENGYTGAGGRAGFETWITADKWQAQVDEALRQALVNLDAVPCPAG
EMDVVLGPGWNGVLLHEAVGHGLEGDFNRKGTSAFSGKIGERVAAPGVTVFDDGAIAGRRGSLTVDDEGTPTQRTLLIED
GVLVGYMHDRMSARLMGLSPTGNARRQSYAHMPMPRMTNTGMLGGDTPREEMIASTKRGLYCANFGGGQVDITNGKFVFQ
CTEAYLIEDGKLTTPVKGATLIGDGPSALTRVTMLGDDFAFDPGIGVCGKSGQSVPVGVGQPSLKITGLTVGGTSV
>Mature_476_residues
MNAHAPSPSILESAGVDSGRAREILGQALAGADDGELFVERSESESFLFDDGRLKSAAYDATEGFGLRVVAGETAGYAHA
SEISEAAIRRAADSAALAKRGYEGVAAEGPRATNAKLYAEDDPLASPDFSDKVALLQEIDAWARARDPRIAQVMVSLAGE
RRTVEIVRADGRLIRDVRPLSRINVQVTVERDGRRENGYTGAGGRAGFETWITADKWQAQVDEALRQALVNLDAVPCPAG
EMDVVLGPGWNGVLLHEAVGHGLEGDFNRKGTSAFSGKIGERVAAPGVTVFDDGAIAGRRGSLTVDDEGTPTQRTLLIED
GVLVGYMHDRMSARLMGLSPTGNARRQSYAHMPMPRMTNTGMLGGDTPREEMIASTKRGLYCANFGGGQVDITNGKFVFQ
CTEAYLIEDGKLTTPVKGATLIGDGPSALTRVTMLGDDFAFDPGIGVCGKSGQSVPVGVGQPSLKITGLTVGGTSV

Specific function: Suppresses The Inhibitory Activity Of The Carbon Storage Regulator (Csra). [C]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=484, Percent_Identity=50, Blast_Score=451, Evalue=1e-128,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50171; Mature: 50171

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAHAPSPSILESAGVDSGRAREILGQALAGADDGELFVERSESESFLFDDGRLKSAAYD
CCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCHHHCC
ATEGFGLRVVAGETAGYAHASEISEAAIRRAADSAALAKRGYEGVAAEGPRATNAKLYAE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
DDPLASPDFSDKVALLQEIDAWARARDPRIAQVMVSLAGERRTVEIVRADGRLIRDVRPL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCEEHHCCCH
SRINVQVTVERDGRRENGYTGAGGRAGFETWITADKWQAQVDEALRQALVNLDAVPCPAG
HHEEEEEEEECCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHHHCCCCCCCCCC
EMDVVLGPGWNGVLLHEAVGHGLEGDFNRKGTSAFSGKIGERVAAPGVTVFDDGAIAGRR
CEEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCHHCCCCCCHHCCCCCEEEECCCCCCCC
GSLTVDDEGTPTQRTLLIEDGVLVGYMHDRMSARLMGLSPTGNARRQSYAHMPMPRMTNT
CCEEECCCCCCCEEEEEEECCEEEEEEHHCCCEEEEECCCCCCHHHHHHCCCCCCCCCCC
GMLGGDTPREEMIASTKRGLYCANFGGGQVDITNGKFVFQCTEAYLIEDGKLTTPVKGAT
CCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEECCEEEEEEEEEEEEECCCEECCCCCCE
LIGDGPSALTRVTMLGDDFAFDPGIGVCGKSGQSVPVGVGQPSLKITGLTVGGTSV
EECCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCC
>Mature Secondary Structure
MNAHAPSPSILESAGVDSGRAREILGQALAGADDGELFVERSESESFLFDDGRLKSAAYD
CCCCCCCCHHHHHCCCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCHHHCC
ATEGFGLRVVAGETAGYAHASEISEAAIRRAADSAALAKRGYEGVAAEGPRATNAKLYAE
CCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEC
DDPLASPDFSDKVALLQEIDAWARARDPRIAQVMVSLAGERRTVEIVRADGRLIRDVRPL
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEECCCCEEHHCCCH
SRINVQVTVERDGRRENGYTGAGGRAGFETWITADKWQAQVDEALRQALVNLDAVPCPAG
HHEEEEEEEECCCCCCCCCCCCCCCCCCHHEEECHHHHHHHHHHHHHHHHCCCCCCCCCC
EMDVVLGPGWNGVLLHEAVGHGLEGDFNRKGTSAFSGKIGERVAAPGVTVFDDGAIAGRR
CEEEEECCCCCCEEEHHHHCCCCCCCCCCCCCCHHCCCCCCHHCCCCCEEEECCCCCCCC
GSLTVDDEGTPTQRTLLIEDGVLVGYMHDRMSARLMGLSPTGNARRQSYAHMPMPRMTNT
CCEEECCCCCCCEEEEEEECCEEEEEEHHCCCEEEEECCCCCCHHHHHHCCCCCCCCCCC
GMLGGDTPREEMIASTKRGLYCANFGGGQVDITNGKFVFQCTEAYLIEDGKLTTPVKGAT
CCCCCCCCHHHHHHHHHCCEEEEECCCCEEEEECCEEEEEEEEEEEEECCCEECCCCCCE
LIGDGPSALTRVTMLGDDFAFDPGIGVCGKSGQSVPVGVGQPSLKITGLTVGGTSV
EECCCHHHHEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]