| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103962
Identifier: 197103962
GI number: 197103962
Start: 520944
End: 522185
Strand: Direct
Name: 197103962
Synonym: PHZ_c0496
Alternate gene names: NA
Gene position: 520944-522185 (Clockwise)
Preceding gene: 197103961
Following gene: 197103963
Centisome position: 13.04
GC content: 70.45
Gene sequence:
>1242_bases ATGACCGCAACGCCCGCCTGCCGCTTCTGCCGCGCCCCGCTCACCCAGACCTTCCTGGACCTGGGTCTCCAGCCGCTGGC CAACAGCTATCTCACCCGCGAGCAGCTGGAGGCCGGGACCGAGGGGACCTATCCGCTGCACACCCGCGTCTGCGGTCGGT GCTTCCTGGTGCAGGCGGACGACGTGGTGCCCGCCGAGGCGATCTTCGACGCCGAGTACGCCTACTTCTCCTCGTACTCG GCCGGCTGGGTGGCGCACGCCAGGCGCTACGCCGAGGCGATGGCCGAGCGATTCGGTCTGGGCCCGGAGTCGCTGGTGAT CGAGGTGGCCAGCAACGACGGCTACCTGCTGCAGCACTTCGTGGCGATGGACGTGCCGGTGCTGGGGATCGAGCCCACCG CCAACACCGCCGAGGCCGCCCGGGCGAAGGGCGTGCGCACCGAGACCGTCTTCTTCAACGAGCAGACCGCGCAGGCGCTG GCGGCCCGCGGCGACCGCGCCGACCTCATGGCGGCCAACAACGTCCTGGCCCACGTGCCGGACATCAATGGCTTCGTGGC CGGCTTCCGGCACGTGCTGAAGCCCGAAGGCGTGCTGACGTTCGAGTTTCCCCACCTCCTGAACCTGATCGAGCAGGTGC AGTTCGACACCATCTACCACGAGCACTTCAGCTACCTGTCGCTGCTGGCGGTGGAGCAGGTGCTGGCGGCGCACGACCTG ATGGCGTTCGACGTGGAGCGCCTGCCGACCCACGGAGGCTCGCTGCGGCTCTACTGCGCGCTGCGCTCCTCGGGTCACGC GGAGACCGACGCCCTGCGGGCGCTGCGGGCCGACGAGGCGGCCGCGGGCCTCGGCCGGATCGAGACCTACGCCGGCTTCA CGCCCAGGGTGGAGGCGGTGCGCGAGAGCTTCCGCGCCTTCCTCGAGCAGGCCCGCTGGGACGGCAAGGAGATCGCCGCC TACGGCGCGGCCGCCAAGGGCAACACCTTCCTGAACTACTGCGGAGCCACGGCGTCGGACATCGTCTGCGCCTTCGACGC CAACCCGGCCAAGCAGGGCCGCTACCTGCCCGGCAGCCACGTGCCGATCCTGGCCCCCGACAAGGTCGCCGAGGTGCGGC CCGACTACGTCCTGATCCTGCCCTGGAACCTGAAGGACGAGATCATGGGCCAGCTGGCCTTCATCCGGGACTGGGGCGGC CGCTTCGTGGTCGCCTCGCCCCGGACCCAGGTCCTGGACTGA
Upstream 100 bases:
>100_bases AGGCCGTGGCGCTGACCATGGAGTGGCACCGCCGGCGCGCCGCCGGCGAACCTGCCCTCGCCTTGTGCCGGGAGCAGATC GCGGCCTACGAAGCCCGCCC
Downstream 100 bases:
>100_bases TGCGCTTCGAGGCCACCGCCATCCCGGGCGTGGTCCGCGTCGAGGCCGAGCCGCGCGCCGACGAGCGGGGCGGCTTCGCC CGCCTGCACTGTCCGGAAGA
Product: SAM-dependent methyltransferase
Products: NA
Alternate protein names: Methyltransferase; SAM-Dependent Methyltransferase; D-Mycarose 3-C-Methyltransferase; NDP-Hexose 3-C-Methyltransferase TylCIII; NDP-Hexose 3-C-Methyltransferase Protein; Methyltransferase Type; Sugar 3-C-Methyl Transferase; Methyltransferase Family Protein; C-3 Methyl Transferase; NDP-Hexose Methyltransferase Protein; NAD-Dependent Epimerase/Dehydratase; Methyltransferase-Like Protein; Transferase; Aminotransferase Class-III; NDP-Hexose Methyltransferase; S-Adenosyl-L-Methionine-Dependent Methyltransferase; NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; S-Adenosyl-Dependent Methyltransferase; S-Adenosyl-Dependent Methyl Transferase; NDP-Hexose 3-C-Methyltransferase; EryBIII NDP-4-Keto-2 6-Dideoxyhexose 3-C-Methyltransferase; C-Methyltransferase Family
Number of amino acids: Translated: 413; Mature: 412
Protein sequence:
>413_residues MTATPACRFCRAPLTQTFLDLGLQPLANSYLTREQLEAGTEGTYPLHTRVCGRCFLVQADDVVPAEAIFDAEYAYFSSYS AGWVAHARRYAEAMAERFGLGPESLVIEVASNDGYLLQHFVAMDVPVLGIEPTANTAEAARAKGVRTETVFFNEQTAQAL AARGDRADLMAANNVLAHVPDINGFVAGFRHVLKPEGVLTFEFPHLLNLIEQVQFDTIYHEHFSYLSLLAVEQVLAAHDL MAFDVERLPTHGGSLRLYCALRSSGHAETDALRALRADEAAAGLGRIETYAGFTPRVEAVRESFRAFLEQARWDGKEIAA YGAAAKGNTFLNYCGATASDIVCAFDANPAKQGRYLPGSHVPILAPDKVAEVRPDYVLILPWNLKDEIMGQLAFIRDWGG RFVVASPRTQVLD
Sequences:
>Translated_413_residues MTATPACRFCRAPLTQTFLDLGLQPLANSYLTREQLEAGTEGTYPLHTRVCGRCFLVQADDVVPAEAIFDAEYAYFSSYS AGWVAHARRYAEAMAERFGLGPESLVIEVASNDGYLLQHFVAMDVPVLGIEPTANTAEAARAKGVRTETVFFNEQTAQAL AARGDRADLMAANNVLAHVPDINGFVAGFRHVLKPEGVLTFEFPHLLNLIEQVQFDTIYHEHFSYLSLLAVEQVLAAHDL MAFDVERLPTHGGSLRLYCALRSSGHAETDALRALRADEAAAGLGRIETYAGFTPRVEAVRESFRAFLEQARWDGKEIAA YGAAAKGNTFLNYCGATASDIVCAFDANPAKQGRYLPGSHVPILAPDKVAEVRPDYVLILPWNLKDEIMGQLAFIRDWGG RFVVASPRTQVLD >Mature_412_residues TATPACRFCRAPLTQTFLDLGLQPLANSYLTREQLEAGTEGTYPLHTRVCGRCFLVQADDVVPAEAIFDAEYAYFSSYSA GWVAHARRYAEAMAERFGLGPESLVIEVASNDGYLLQHFVAMDVPVLGIEPTANTAEAARAKGVRTETVFFNEQTAQALA ARGDRADLMAANNVLAHVPDINGFVAGFRHVLKPEGVLTFEFPHLLNLIEQVQFDTIYHEHFSYLSLLAVEQVLAAHDLM AFDVERLPTHGGSLRLYCALRSSGHAETDALRALRADEAAAGLGRIETYAGFTPRVEAVRESFRAFLEQARWDGKEIAAY GAAAKGNTFLNYCGATASDIVCAFDANPAKQGRYLPGSHVPILAPDKVAEVRPDYVLILPWNLKDEIMGQLAFIRDWGGR FVVASPRTQVLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45276; Mature: 45145
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATPACRFCRAPLTQTFLDLGLQPLANSYLTREQLEAGTEGTYPLHTRVCGRCFLVQAD CCCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEECC DVVPAEAIFDAEYAYFSSYSAGWVAHARRYAEAMAERFGLGPESLVIEVASNDGYLLQHF CCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH VAMDVPVLGIEPTANTAEAARAKGVRTETVFFNEQTAQALAARGDRADLMAANNVLAHVP HHHCCCEEECCCCCCHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCHHHHHHCCCEEECC DINGFVAGFRHVLKPEGVLTFEFPHLLNLIEQVQFDTIYHEHFSYLSLLAVEQVLAAHDL CCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAFDVERLPTHGGSLRLYCALRSSGHAETDALRALRADEAAAGLGRIETYAGFTPRVEAV HHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH RESFRAFLEQARWDGKEIAAYGAAAKGNTFLNYCGATASDIVCAFDANPAKQGRYLPGSH HHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCCCHHCEEEEECCCHHHCCCCCCCCC VPILAPDKVAEVRPDYVLILPWNLKDEIMGQLAFIRDWGGRFVVASPRTQVLD CCEECCCHHHHCCCCEEEEEECCCCHHHHHHHHHEEECCCEEEEECCCHHCCC >Mature Secondary Structure TATPACRFCRAPLTQTFLDLGLQPLANSYLTREQLEAGTEGTYPLHTRVCGRCFLVQAD CCCCHHHHHHCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHCCEEEEEECC DVVPAEAIFDAEYAYFSSYSAGWVAHARRYAEAMAERFGLGPESLVIEVASNDGYLLQHF CCCCHHHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHH VAMDVPVLGIEPTANTAEAARAKGVRTETVFFNEQTAQALAARGDRADLMAANNVLAHVP HHHCCCEEECCCCCCHHHHHHHCCCEEEEEEECHHHHHHHHHCCCCHHHHHHCCCEEECC DINGFVAGFRHVLKPEGVLTFEFPHLLNLIEQVQFDTIYHEHFSYLSLLAVEQVLAAHDL CCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MAFDVERLPTHGGSLRLYCALRSSGHAETDALRALRADEAAAGLGRIETYAGFTPRVEAV HHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHH RESFRAFLEQARWDGKEIAAYGAAAKGNTFLNYCGATASDIVCAFDANPAKQGRYLPGSH HHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHCCCCCHHCEEEEECCCHHHCCCCCCCCC VPILAPDKVAEVRPDYVLILPWNLKDEIMGQLAFIRDWGGRFVVASPRTQVLD CCEECCCHHHHCCCCEEEEEECCCCHHHHHHHHHEEECCCEEEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA