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The map label for this gene is yfnF [H]

Identifier: 197103942

GI number: 197103942

Start: 495578

End: 497170

Strand: Reverse

Name: yfnF [H]

Synonym: PHZ_c0476

Alternate gene names: 197103942

Gene position: 497170-495578 (Counterclockwise)

Preceding gene: 197103943

Following gene: 197103941

Centisome position: 12.44

GC content: 75.02

Gene sequence:

>1593_bases
ATGCAGAGCCTTCGCCAGGCGGAGCCGTCCGCGCGCCGGGTCGTGGTGGCGGCCGACGGGCCGATCCCCGAGCTGGCCGG
CGTGGCCGAGGTGATCGAGGCCGCCGACCTCGGCGCGCCGGTGCGGGACATGAGCGTCTACTACGAGGCGCTCGAGCTGA
ACACGGCGGTGAAGCCGTTCGTCTTCCGCACGATGCTGGCCTGGGACGGCGTGGACAGCGTCACCTACCTCGACCCCGAC
ATCTGGGTCTTCCGGCCGCTGGCGCCGGTGCGCGAGGCCCTGGCGCGCACGCCGCTCTGCCTGACGCCGCACACCGTCCG
GCCGCTCACGACGCCGGGCAGCCCCACGAACGAGGACCTGGCCAGATCGGGAACCTACAACCTCGGCTTCCTGTCGGCGC
GGCGCGATCGGCAGGTGGACGCCCTGCTGGACTGGTGGGCCGAGCAGTGCCGCTTCGACTGCCGGGTGGACCTCGAGGGC
GGCGTCTTCACCGACCAGAAGCACATGGACCGGGCGCCGGAGTTCGTGCCGGGCGCCGCCATCCTCACCCATCCAGGCCT
CAACCTCGCCTACTGGAACCTGGAGGGCCGCACGCTCGCCCGCGGCGCCGACGGCTGGACCGTCGACGGCGAGCCCCTCG
TCTTCTTCCACTTCTCAGGCTTCGACCCGGCCCGCCCGCTCGACCTTTCCAAGCACCAGACCCGGTTCCGCGTGGCGCGC
GGCTCGCCCCTGGCGGCCCTGCTCGCCGACTACGCTCGCGCGTTGAACGCCAACGGGCATGCGCAGGCCAAGGCGCGCGG
CTACGGCTTCGACCGGTTCGCCTCGGGCCGCCGGGTCACGCCGGCCATGCGCAGGGCCGCCCTGGCCGCCGCCCGGGCGG
GCGAGACCTTCCCGGACGGGCTCGGTCCCGCCACCGAGGCCTGGATGGACGCCGAGGCCCCCGCCGCGCCCGGCCTCACC
CGCGTCCAGGCCGCGATCGCGCGCGAGCGCCCGGCGGCCGCCTTCCCCTGGTGGTTCGTCCCCAACGCCGAGGCCCTGGG
CGCCGACCGACCGTCGGCCGACGCGGCGCGGAAGCTCAAAGGTCCGACAGAGCCCGCCCAGCGCTACAGCAACGACGAGC
TCACCGCCTGGTGGATCGGCCCCGAGGCGATCGCCGGCCGCTTCGAGATGGACGCCCTGCCCGACCATGAGTTCGACCGC
CTGCTGGCCGAGCCCTGGATCATGGCCCGGGCGGCCGAGCTCTCGGAGACGGAGGCCCGACCCTCCGAACTGCGCCGGAC
GCTCTTCGCCGCCTTCGGAGTCCCGCATGCCGCCGGCTGGCCCGAGCGCCTGAAGGCGCCGCTGCAGGCGCCGCACCTGG
CGCGCGCCGAGGGCCTGCCCCGCCCGTTCGTGCGCCTGTTCCGCGAGATCTGGGACGCGCGGCCCGACGTGCAGCGGCTC
TATCCGCTGGACCGCCCGCTCGGCCGGTTCCGCTTCCTGCGCTGGCTGCTCGCCGGGGGGCTGGCCGAGTACGGCGCGCC
GGTCGACAGCCTGCCCGCCGACGTCCTGGCCCATCCCCTGACGCGGCTGGCGCGCGCCAGCCTGCGGCGATGA

Upstream 100 bases:

>100_bases
CGCCTGACGGTCGGCCTGTTAGGCAGGGCCCAGGAAGTCGGGCGTGGACGTCATCTTCACCATCGTGTCGCGGAACTACG
CGGCCCAGGCGGCGAGCCTG

Downstream 100 bases:

>100_bases
GCGTCCGCGCCCTGCAGGGCCTCTGGCGGCGGGCGCTGCCCGAACCGCTGCGGCGCCTGGCGGGCCCGGCCGTGCGCCAG
GGCCTGCGGACCTACGTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 530; Mature: 530

Protein sequence:

>530_residues
MQSLRQAEPSARRVVVAADGPIPELAGVAEVIEAADLGAPVRDMSVYYEALELNTAVKPFVFRTMLAWDGVDSVTYLDPD
IWVFRPLAPVREALARTPLCLTPHTVRPLTTPGSPTNEDLARSGTYNLGFLSARRDRQVDALLDWWAEQCRFDCRVDLEG
GVFTDQKHMDRAPEFVPGAAILTHPGLNLAYWNLEGRTLARGADGWTVDGEPLVFFHFSGFDPARPLDLSKHQTRFRVAR
GSPLAALLADYARALNANGHAQAKARGYGFDRFASGRRVTPAMRRAALAAARAGETFPDGLGPATEAWMDAEAPAAPGLT
RVQAAIARERPAAAFPWWFVPNAEALGADRPSADAARKLKGPTEPAQRYSNDELTAWWIGPEAIAGRFEMDALPDHEFDR
LLAEPWIMARAAELSETEARPSELRRTLFAAFGVPHAAGWPERLKAPLQAPHLARAEGLPRPFVRLFREIWDARPDVQRL
YPLDRPLGRFRFLRWLLAGGLAEYGAPVDSLPADVLAHPLTRLARASLRR

Sequences:

>Translated_530_residues
MQSLRQAEPSARRVVVAADGPIPELAGVAEVIEAADLGAPVRDMSVYYEALELNTAVKPFVFRTMLAWDGVDSVTYLDPD
IWVFRPLAPVREALARTPLCLTPHTVRPLTTPGSPTNEDLARSGTYNLGFLSARRDRQVDALLDWWAEQCRFDCRVDLEG
GVFTDQKHMDRAPEFVPGAAILTHPGLNLAYWNLEGRTLARGADGWTVDGEPLVFFHFSGFDPARPLDLSKHQTRFRVAR
GSPLAALLADYARALNANGHAQAKARGYGFDRFASGRRVTPAMRRAALAAARAGETFPDGLGPATEAWMDAEAPAAPGLT
RVQAAIARERPAAAFPWWFVPNAEALGADRPSADAARKLKGPTEPAQRYSNDELTAWWIGPEAIAGRFEMDALPDHEFDR
LLAEPWIMARAAELSETEARPSELRRTLFAAFGVPHAAGWPERLKAPLQAPHLARAEGLPRPFVRLFREIWDARPDVQRL
YPLDRPLGRFRFLRWLLAGGLAEYGAPVDSLPADVLAHPLTRLARASLRR
>Mature_530_residues
MQSLRQAEPSARRVVVAADGPIPELAGVAEVIEAADLGAPVRDMSVYYEALELNTAVKPFVFRTMLAWDGVDSVTYLDPD
IWVFRPLAPVREALARTPLCLTPHTVRPLTTPGSPTNEDLARSGTYNLGFLSARRDRQVDALLDWWAEQCRFDCRVDLEG
GVFTDQKHMDRAPEFVPGAAILTHPGLNLAYWNLEGRTLARGADGWTVDGEPLVFFHFSGFDPARPLDLSKHQTRFRVAR
GSPLAALLADYARALNANGHAQAKARGYGFDRFASGRRVTPAMRRAALAAARAGETFPDGLGPATEAWMDAEAPAAPGLT
RVQAAIARERPAAAFPWWFVPNAEALGADRPSADAARKLKGPTEPAQRYSNDELTAWWIGPEAIAGRFEMDALPDHEFDR
LLAEPWIMARAAELSETEARPSELRRTLFAAFGVPHAAGWPERLKAPLQAPHLARAEGLPRPFVRLFREIWDARPDVQRL
YPLDRPLGRFRFLRWLLAGGLAEYGAPVDSLPADVLAHPLTRLARASLRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005069 [H]

Pfam domain/function: PF03407 Nucleotid_trans [H]

EC number: NA

Molecular weight: Translated: 58484; Mature: 58484

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLRQAEPSARRVVVAADGPIPELAGVAEVIEAADLGAPVRDMSVYYEALELNTAVKPF
CCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
VFRTMLAWDGVDSVTYLDPDIWVFRPLAPVREALARTPLCLTPHTVRPLTTPGSPTNEDL
HHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHH
ARSGTYNLGFLSARRDRQVDALLDWWAEQCRFDCRVDLEGGVFTDQKHMDRAPEFVPGAA
HHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCEECCHHHHCCCCCCCCCCC
ILTHPGLNLAYWNLEGRTLARGADGWTVDGEPLVFFHFSGFDPARPLDLSKHQTRFRVAR
EEECCCCEEEEEECCCCEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCHHHHEEEEC
GSPLAALLADYARALNANGHAQAKARGYGFDRFASGRRVTPAMRRAALAAARAGETFPDG
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
LGPATEAWMDAEAPAAPGLTRVQAAIARERPAAAFPWWFVPNAEALGADRPSADAARKLK
CCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCHHHHHHCC
GPTEPAQRYSNDELTAWWIGPEAIAGRFEMDALPDHEFDRLLAEPWIMARAAELSETEAR
CCCCHHHHCCCCCEEEEEECHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCC
PSELRRTLFAAFGVPHAAGWPERLKAPLQAPHLARAEGLPRPFVRLFREIWDARPDVQRL
HHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHH
YPLDRPLGRFRFLRWLLAGGLAEYGAPVDSLPADVLAHPLTRLARASLRR
CCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MQSLRQAEPSARRVVVAADGPIPELAGVAEVIEAADLGAPVRDMSVYYEALELNTAVKPF
CCCHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHH
VFRTMLAWDGVDSVTYLDPDIWVFRPLAPVREALARTPLCLTPHTVRPLTTPGSPTNEDL
HHHHHHHHCCCCCCEEECCCCEEECCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHH
ARSGTYNLGFLSARRDRQVDALLDWWAEQCRFDCRVDLEGGVFTDQKHMDRAPEFVPGAA
HHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCEECCHHHHCCCCCCCCCCC
ILTHPGLNLAYWNLEGRTLARGADGWTVDGEPLVFFHFSGFDPARPLDLSKHQTRFRVAR
EEECCCCEEEEEECCCCEEECCCCCCEECCCCEEEEEECCCCCCCCCCCCCHHHHEEEEC
GSPLAALLADYARALNANGHAQAKARGYGFDRFASGRRVTPAMRRAALAAARAGETFPDG
CCCHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHCCCCCCCC
LGPATEAWMDAEAPAAPGLTRVQAAIARERPAAAFPWWFVPNAEALGADRPSADAARKLK
CCCHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCCCHHCCCCCCCHHHHHHCC
GPTEPAQRYSNDELTAWWIGPEAIAGRFEMDALPDHEFDRLLAEPWIMARAAELSETEAR
CCCCHHHHCCCCCEEEEEECHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHCCC
PSELRRTLFAAFGVPHAAGWPERLKAPLQAPHLARAEGLPRPFVRLFREIWDARPDVQRL
HHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHH
YPLDRPLGRFRFLRWLLAGGLAEYGAPVDSLPADVLAHPLTRLARASLRR
CCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141694; 9384377 [H]