| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is ppsA [H]
Identifier: 197103923
GI number: 197103923
Start: 467288
End: 469729
Strand: Direct
Name: ppsA [H]
Synonym: PHZ_c0457
Alternate gene names: 197103923
Gene position: 467288-469729 (Clockwise)
Preceding gene: 197103922
Following gene: 197103924
Centisome position: 11.69
GC content: 73.14
Gene sequence:
>2442_bases ATGGCGCCTGCCCACTACATCCGACCCTTCGACACCCTGGCCCTTGGGGACGTGCCCCTGGTGGGCGGCAAGACCGCCTC GCTGGGCGAGCTGCAGCAGCTGCTGAAGGGGGCGAAGGTCGCCGTGCCCGAGGGGTTCGCGATCACCGCCCAGGCGTACC GGGACGCGCTGACCGGGGCCGGCGCCTGGGAGCCGCTGCGGGCGCTGCTGGAAGGACTGGACGTCGAGGACGTGGCCGAG CTGGCGCGCCGGGCGGCCGAGGCCCGGCGGATCGTCTACGAGGCGACAGGCGGCGAGGACCTGCGCCGCCAGATCGTCGA GGGCTTCCGTGAGCTGAAGCGGGCGGTGGGGGCCGACATCAGCGTGGCGGTGCGCAGCTCGGCCACCGCCGAGGACCTGC CGACAGCCAGCTTCGCCGGCCAGCACGAGAGCTTCCTGCACGTGCGCGACGAGGCCGCGCTGATCGAGGCGTGCCGCCGC TGCTTCGCGTCGCTGTTCACCGACCGGGCGGTGGTCTACCGGACCCACAACGGCTTCGACCACCTGAAGGTCGCGCTCTC CATCGCGGTGATGCGGATGGTCCGTTCCGACCGGGCGGCCAGCGGGGTGACCTTCACCCTGGACACCGAGAGCGGGTTCC GGGACGTGGTGTTCGTCACCGGCGCCTACGGCCTGGGCGAGAACGTGGTGCAGGGCCTCGTCGACCCGGACGAGTTCTAC GTCCACAAGCCGACGTTCCGGCAGGGCTACCGCGCGGTGCTGAAGCGCAGCCTGGGGGCCAAGCAGACCCGCATCGTCTG GGACCGCAGGGCCGGCGGCGCGGCGCTGAAGACCTTGCCGGTCGGCAGGGCCGAGCGCGGCCGCTACTGCCTGACCGACG CCGAGGTCATGGACCTGACCGACGTGGCGATCCGCATCGAGGACCACTACTCCAAGCGCGCCGGGCGGCCGACGCCGATG GACATCGAGTGGGCCAAGGACGCGGTGGACGGGCGGCTCTACGTCGTCCAGGCGCGGCCCGAGACCGTGGCCTCGCAGCG CGGCCAGACCCTGGAGACCTTCCGCCTGACCGGCTCGGGACCCGTGCTCGCGACCGGCAAGGCGGTGGGCGAGCGGATCG CCTCGGGACGGGTGCGGGTGATCCGCGGCCCCGCGGACCTGCGGGCGTTCCAGGAAGGCGAGGTGCTGGTGGCGCCCGCG ACCAGCCCAGACTGGGAGCCGGTGATGAAGCGCGCGGCGGCCGTGGTCACCGACCGCGGCGGGCGCACCTGCCACGCCGC CATCGTCGCCCGGGAGCTGGGCCTGCCGGCGGTGGTGGGGGCGGGGGACGCCACGGCGCGGCTGGGGGACGGCGGCCTCG TCACCGTCTCCTGCGCCGAGGGCGAGACCGGCCGGGTCTACCAGGGGCGGGTCCCGTTCGAGGTGACGCGGCTGGACCTG GCCTCGCTGGCGACGCCCGTCACGGAGGTGATGCTGAACCTGGCGCATCCCGAGCTGGCCTTCCGGTTCGCCCAGCTGCC CTCGGCGGGCGTGGGCCTGGCCAGGCTGGAGTTCGTGATCGGCGAGCAGATCCGGCTGCACCCGATGGCGGCGGCGCATC CGGACCGGGTGACCTCGGCCCGGCAACGGGCGCAGATCGCCCGGCTGTCGCGCGGCTTTCCCTCGCCGCGGGCCTATTTC GTCGAGCGGCTGGTGGAGGGCGCGGGCGTGATCGCGGCCGCCTTCCACCCGCGGCCGGTGATCGTCCGGCTGTCGGACTT CAAGACCAACGAGTACGCCCGCCTGACCGGCGGGGCCGACTTCGAGCCCCGCGAGGAGAACCCGATGCTGGGGTTCCGGG GCGCCTCCCGCTACGCCCATCCGCTCTACGCCGACGGCTTCGCCCTGGAGTGCGAGGCCCTGGCGCGGGTGCGGCGGGAC CTCGGCCTGAAGAACCTGAAGGTGATGATCCCCTTCTGCCGGCGGGTGGAGGAGGCCCGGCGCGTGCTGGACGCCATGGC CGCCAACGGCCTGAAGCGCGGCGAGGACGGGCTGGAGGTCTATGTGATGTGCGAGATCCCCAACAACGTCATCCAGATCG ACGCCTTCGCCGAGCTGTTCGACGGGTTCTCGATCGGCTCAAACGACCTGACCCAGCTCGTGCTGGGCGTGGACCGCGAC TCCGAGACGGTGGCCTTCGACTTCGACGAGCGCGACCCGGGCGTGCTGGAGATGCTGCGCCAGGCGGTGACCGGGGCGCA CCGCAACGGCCGGCACGTGGGCATCTGCGGCGAGGCGCCGGCGACCTATCCCGAGGTCGCGGCGTTTCTCGCCGGCGTCG GCATCGACTCCATCAGCGTCAATCCGCAGAGCCTGCCGCGCACGCTGGCCGCGGTGCGCGAGGCGGAAGCCGCGGCCGCC AAGGCGCCGGCCCGGGAGCTGTCGAAGATCGGCGGTGTTTGA
Upstream 100 bases:
>100_bases TTCAGCGGAACGCGGCCGACCTGATCCCGATTGACCTCACTCAAGGCGCGCGCCGGCCGCGCGCCTAGGTTGCTCCCCTC GCACCTTGCGGAGCGGACCC
Downstream 100 bases:
>100_bases GCCGGATCAAACCGGCCCCGGCGCCGGCCGTGGTAGACGTCGGATCGTTCCGGTGTGGCTTTGCGGCTCGGCCGGAACGG GGCCAGCGGCCAAACGGCCA
Product: phosphoenolpyruvate synthase
Products: NA
Alternate protein names: PEP synthase; Pyruvate, water dikinase [H]
Number of amino acids: Translated: 813; Mature: 812
Protein sequence:
>813_residues MAPAHYIRPFDTLALGDVPLVGGKTASLGELQQLLKGAKVAVPEGFAITAQAYRDALTGAGAWEPLRALLEGLDVEDVAE LARRAAEARRIVYEATGGEDLRRQIVEGFRELKRAVGADISVAVRSSATAEDLPTASFAGQHESFLHVRDEAALIEACRR CFASLFTDRAVVYRTHNGFDHLKVALSIAVMRMVRSDRAASGVTFTLDTESGFRDVVFVTGAYGLGENVVQGLVDPDEFY VHKPTFRQGYRAVLKRSLGAKQTRIVWDRRAGGAALKTLPVGRAERGRYCLTDAEVMDLTDVAIRIEDHYSKRAGRPTPM DIEWAKDAVDGRLYVVQARPETVASQRGQTLETFRLTGSGPVLATGKAVGERIASGRVRVIRGPADLRAFQEGEVLVAPA TSPDWEPVMKRAAAVVTDRGGRTCHAAIVARELGLPAVVGAGDATARLGDGGLVTVSCAEGETGRVYQGRVPFEVTRLDL ASLATPVTEVMLNLAHPELAFRFAQLPSAGVGLARLEFVIGEQIRLHPMAAAHPDRVTSARQRAQIARLSRGFPSPRAYF VERLVEGAGVIAAAFHPRPVIVRLSDFKTNEYARLTGGADFEPREENPMLGFRGASRYAHPLYADGFALECEALARVRRD LGLKNLKVMIPFCRRVEEARRVLDAMAANGLKRGEDGLEVYVMCEIPNNVIQIDAFAELFDGFSIGSNDLTQLVLGVDRD SETVAFDFDERDPGVLEMLRQAVTGAHRNGRHVGICGEAPATYPEVAAFLAGVGIDSISVNPQSLPRTLAAVREAEAAAA KAPARELSKIGGV
Sequences:
>Translated_813_residues MAPAHYIRPFDTLALGDVPLVGGKTASLGELQQLLKGAKVAVPEGFAITAQAYRDALTGAGAWEPLRALLEGLDVEDVAE LARRAAEARRIVYEATGGEDLRRQIVEGFRELKRAVGADISVAVRSSATAEDLPTASFAGQHESFLHVRDEAALIEACRR CFASLFTDRAVVYRTHNGFDHLKVALSIAVMRMVRSDRAASGVTFTLDTESGFRDVVFVTGAYGLGENVVQGLVDPDEFY VHKPTFRQGYRAVLKRSLGAKQTRIVWDRRAGGAALKTLPVGRAERGRYCLTDAEVMDLTDVAIRIEDHYSKRAGRPTPM DIEWAKDAVDGRLYVVQARPETVASQRGQTLETFRLTGSGPVLATGKAVGERIASGRVRVIRGPADLRAFQEGEVLVAPA TSPDWEPVMKRAAAVVTDRGGRTCHAAIVARELGLPAVVGAGDATARLGDGGLVTVSCAEGETGRVYQGRVPFEVTRLDL ASLATPVTEVMLNLAHPELAFRFAQLPSAGVGLARLEFVIGEQIRLHPMAAAHPDRVTSARQRAQIARLSRGFPSPRAYF VERLVEGAGVIAAAFHPRPVIVRLSDFKTNEYARLTGGADFEPREENPMLGFRGASRYAHPLYADGFALECEALARVRRD LGLKNLKVMIPFCRRVEEARRVLDAMAANGLKRGEDGLEVYVMCEIPNNVIQIDAFAELFDGFSIGSNDLTQLVLGVDRD SETVAFDFDERDPGVLEMLRQAVTGAHRNGRHVGICGEAPATYPEVAAFLAGVGIDSISVNPQSLPRTLAAVREAEAAAA KAPARELSKIGGV >Mature_812_residues APAHYIRPFDTLALGDVPLVGGKTASLGELQQLLKGAKVAVPEGFAITAQAYRDALTGAGAWEPLRALLEGLDVEDVAEL ARRAAEARRIVYEATGGEDLRRQIVEGFRELKRAVGADISVAVRSSATAEDLPTASFAGQHESFLHVRDEAALIEACRRC FASLFTDRAVVYRTHNGFDHLKVALSIAVMRMVRSDRAASGVTFTLDTESGFRDVVFVTGAYGLGENVVQGLVDPDEFYV HKPTFRQGYRAVLKRSLGAKQTRIVWDRRAGGAALKTLPVGRAERGRYCLTDAEVMDLTDVAIRIEDHYSKRAGRPTPMD IEWAKDAVDGRLYVVQARPETVASQRGQTLETFRLTGSGPVLATGKAVGERIASGRVRVIRGPADLRAFQEGEVLVAPAT SPDWEPVMKRAAAVVTDRGGRTCHAAIVARELGLPAVVGAGDATARLGDGGLVTVSCAEGETGRVYQGRVPFEVTRLDLA SLATPVTEVMLNLAHPELAFRFAQLPSAGVGLARLEFVIGEQIRLHPMAAAHPDRVTSARQRAQIARLSRGFPSPRAYFV ERLVEGAGVIAAAFHPRPVIVRLSDFKTNEYARLTGGADFEPREENPMLGFRGASRYAHPLYADGFALECEALARVRRDL GLKNLKVMIPFCRRVEEARRVLDAMAANGLKRGEDGLEVYVMCEIPNNVIQIDAFAELFDGFSIGSNDLTQLVLGVDRDS ETVAFDFDERDPGVLEMLRQAVTGAHRNGRHVGICGEAPATYPEVAAFLAGVGIDSISVNPQSLPRTLAAVREAEAAAAK APARELSKIGGV
Specific function: Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate [H]
COG id: COG0574
COG function: function code G; Phosphoenolpyruvate synthase/pyruvate phosphate dikinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PEP-utilizing enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1787994, Length=786, Percent_Identity=50.2544529262086, Blast_Score=781, Evalue=0.0, Organism=Escherichia coli, GI1788756, Length=449, Percent_Identity=26.9487750556793, Blast_Score=123, Evalue=4e-29, Organism=Escherichia coli, GI48994992, Length=423, Percent_Identity=29.0780141843972, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1788726, Length=239, Percent_Identity=30.9623430962343, Blast_Score=102, Evalue=9e-23, Organism=Escherichia coli, GI1789193, Length=475, Percent_Identity=27.1578947368421, Blast_Score=97, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17564524, Length=236, Percent_Identity=28.3898305084746, Blast_Score=77, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR008279 - InterPro: IPR006319 - InterPro: IPR018274 - InterPro: IPR023151 - InterPro: IPR000121 - InterPro: IPR002192 - InterPro: IPR015813 [H]
Pfam domain/function: PF00391 PEP-utilizers; PF02896 PEP-utilizers_C; PF01326 PPDK_N [H]
EC number: =2.7.9.2 [H]
Molecular weight: Translated: 87788; Mature: 87657
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00370 PEP_ENZYMES_PHOS_SITE ; PS00742 PEP_ENZYMES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAHYIRPFDTLALGDVPLVGGKTASLGELQQLLKGAKVAVPEGFAITAQAYRDALTGA CCCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEHHHHHHHHCCC GAWEPLRALLEGLDVEDVAELARRAAEARRIVYEATGGEDLRRQIVEGFRELKRAVGADI CCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCE SVAVRSSATAEDLPTASFAGQHESFLHVRDEAALIEACRRCFASLFTDRAVVYRTHNGFD EEEEECCCCHHHCCCCHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCHH HLKVALSIAVMRMVRSDRAASGVTFTLDTESGFRDVVFVTGAYGLGENVVQGLVDPDEFY HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCCCCEE VHKPTFRQGYRAVLKRSLGAKQTRIVWDRRAGGAALKTLPVGRAERGRYCLTDAEVMDLT EECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEECCCHHHHHE DVAIRIEDHYSKRAGRPTPMDIEWAKDAVDGRLYVVQARPETVASQRGQTLETFRLTGSG EEEEEEEHHHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEEEEECCC PVLATGKAVGERIASGRVRVIRGPADLRAFQEGEVLVAPATSPDWEPVMKRAAAVVTDRG CEEECCHHHHHHHHCCCEEEEECCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC GRTCHAAIVARELGLPAVVGAGDATARLGDGGLVTVSCAEGETGRVYQGRVPFEVTRLDL CCEEHHHHHHHHCCCCEEEECCCCCEEECCCCEEEEEECCCCCCCEEECCCCEEEHHHHH ASLATPVTEVMLNLAHPELAFRFAQLPSAGVGLARLEFVIGEQIRLHPMAAAHPDRVTSA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHH RQRAQIARLSRGFPSPRAYFVERLVEGAGVIAAAFHPRPVIVRLSDFKTNEYARLTGGAD HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCEEEECCCCC FEPREENPMLGFRGASRYAHPLYADGFALECEALARVRRDLGLKNLKVMIPFCRRVEEAR CCCCCCCCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVLDAMAANGLKRGEDGLEVYVMCEIPNNVIQIDAFAELFDGFSIGSNDLTQLVLGVDRD HHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHEECCCC SETVAFDFDERDPGVLEMLRQAVTGAHRNGRHVGICGEAPATYPEVAAFLAGVGIDSISV CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC NPQSLPRTLAAVREAEAAAAKAPARELSKIGGV CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC >Mature Secondary Structure APAHYIRPFDTLALGDVPLVGGKTASLGELQQLLKGAKVAVPEGFAITAQAYRDALTGA CCCCCCCCCCHHEECCCCCCCCCCCCHHHHHHHHCCCEEECCCCCEEEHHHHHHHHCCC GAWEPLRALLEGLDVEDVAELARRAAEARRIVYEATGGEDLRRQIVEGFRELKRAVGADI CCHHHHHHHHCCCCHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCE SVAVRSSATAEDLPTASFAGQHESFLHVRDEAALIEACRRCFASLFTDRAVVYRTHNGFD EEEEECCCCHHHCCCCHHCCCCCCEEEECHHHHHHHHHHHHHHHHHCCCEEEEEECCCHH HLKVALSIAVMRMVRSDRAASGVTFTLDTESGFRDVVFVTGAYGLGENVVQGLVDPDEFY HHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEEEEEEECCCCCHHHHHHCCCCCCEE VHKPTFRQGYRAVLKRSLGAKQTRIVWDRRAGGAALKTLPVGRAERGRYCLTDAEVMDLT EECCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEECCCCCCCCCCEEECCCHHHHHE DVAIRIEDHYSKRAGRPTPMDIEWAKDAVDGRLYVVQARPETVASQRGQTLETFRLTGSG EEEEEEEHHHHHHCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHCCCCEEEEEEEECCC PVLATGKAVGERIASGRVRVIRGPADLRAFQEGEVLVAPATSPDWEPVMKRAAAVVTDRG CEEECCHHHHHHHHCCCEEEEECCHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC GRTCHAAIVARELGLPAVVGAGDATARLGDGGLVTVSCAEGETGRVYQGRVPFEVTRLDL CCEEHHHHHHHHCCCCEEEECCCCCEEECCCCEEEEEECCCCCCCEEECCCCEEEHHHHH ASLATPVTEVMLNLAHPELAFRFAQLPSAGVGLARLEFVIGEQIRLHPMAAAHPDRVTSA HHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEECCCCCCHHHHHH RQRAQIARLSRGFPSPRAYFVERLVEGAGVIAAAFHPRPVIVRLSDFKTNEYARLTGGAD HHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEEEEECCCCCCEEEECCCCC FEPREENPMLGFRGASRYAHPLYADGFALECEALARVRRDLGLKNLKVMIPFCRRVEEAR CCCCCCCCCEEECCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH RVLDAMAANGLKRGEDGLEVYVMCEIPNNVIQIDAFAELFDGFSIGSNDLTQLVLGVDRD HHHHHHHHCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHEECCCC SETVAFDFDERDPGVLEMLRQAVTGAHRNGRHVGICGEAPATYPEVAAFLAGVGIDSISV CCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCC NPQSLPRTLAAVREAEAAAAKAPARELSKIGGV CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]