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The map label for this gene is arnC [H]

Identifier: 197103893

GI number: 197103893

Start: 436269

End: 436994

Strand: Direct

Name: arnC [H]

Synonym: PHZ_c0427

Alternate gene names: 197103893

Gene position: 436269-436994 (Clockwise)

Preceding gene: 197103890

Following gene: 197103894

Centisome position: 10.92

GC content: 73.14

Gene sequence:

>726_bases
ATGGCTCCGCGCCCCGACATCTCCGTGGTGGTCCCGGTCTTCGACGAGGAGGGGGCGGCGCCGGCCCTGGCGCGGGAGAT
CGCCGCCGCCTTCCGGGGGCGCGACTTCGAGATCGTGTTCGTGGACGACGCCAGCCGCGACGGCACCCGCGCGGCCCTGC
AGGCGCTGAAGGCCGAGATCCCGCAGCTGAGGCTGGTGGGCCACCGGAAGAACGCCGGCCAGAGCCGGGCCATCCGCACC
GGCGTGCTGGCGGCCCGCGGCGAGGTGGTGGTCACCCTGGACGGCGACGGCCAGAACGATCCCGCCGACGGGCCCGCGCT
GGTCGACGCCCTGCTGGCCGGACCGCCCGACCTCGCCATGGTCGGCGGCGAGCGGGTCAAGCGCCAGGACAGCCGGGCCA
AGAAGATCGCCTCGAAGGTCGGCAACGGGGTGCGCAAGCGGCTGCTGAAGGACACCGCCAACGACACCGGCTGCGGGCTG
AAGGCGTTCCGGCGCGAGGCCTTCCTGCGCCTGCCGTACTTCGACCACATGCACCGCTACCTGCCGGCGCTGATGATCCG
CGAGGGCTTCCGCTCGGAGTTCCGGCCGGTGAACCACCGCCACCGGCAGACGGGGCGGTCGAAGTACACGAACCTCGGCC
GGCTGTGGGCCTCGCTCTCGGACCTTGTGGGCGTGATGTGGCTGCAGTCGCGGGCGCGGATCCCCGGCGGCTTCGACGAG
CTCTAG

Upstream 100 bases:

>100_bases
GGGGCGGTGATAGCACAACCGTCCCGGCGGGGAGGCTTCCTCGCTTCGCTGGACAAGGGGCGATGGTGGCGCCCGGCCCG
GGCTCGCGCTAAGGACGGCC

Downstream 100 bases:

>100_bases
GTGAGGGCGCTGAAGATCAGCGTGACCACGGCCAGGTCGAGGAACTTGAAGGCGAATTGCAGCATGGCCGGGTCCGTGGT
CGAAGGGTCCGCGAAGGCCC

Product: glycosyl transferase

Products: NA

Alternate protein names: Undecaprenyl-phosphate Ara4FN transferase; Ara4FN transferase [H]

Number of amino acids: Translated: 241; Mature: 240

Protein sequence:

>241_residues
MAPRPDISVVVPVFDEEGAAPALAREIAAAFRGRDFEIVFVDDASRDGTRAALQALKAEIPQLRLVGHRKNAGQSRAIRT
GVLAARGEVVVTLDGDGQNDPADGPALVDALLAGPPDLAMVGGERVKRQDSRAKKIASKVGNGVRKRLLKDTANDTGCGL
KAFRREAFLRLPYFDHMHRYLPALMIREGFRSEFRPVNHRHRQTGRSKYTNLGRLWASLSDLVGVMWLQSRARIPGGFDE
L

Sequences:

>Translated_241_residues
MAPRPDISVVVPVFDEEGAAPALAREIAAAFRGRDFEIVFVDDASRDGTRAALQALKAEIPQLRLVGHRKNAGQSRAIRT
GVLAARGEVVVTLDGDGQNDPADGPALVDALLAGPPDLAMVGGERVKRQDSRAKKIASKVGNGVRKRLLKDTANDTGCGL
KAFRREAFLRLPYFDHMHRYLPALMIREGFRSEFRPVNHRHRQTGRSKYTNLGRLWASLSDLVGVMWLQSRARIPGGFDE
L
>Mature_240_residues
APRPDISVVVPVFDEEGAAPALAREIAAAFRGRDFEIVFVDDASRDGTRAALQALKAEIPQLRLVGHRKNAGQSRAIRTG
VLAARGEVVVTLDGDGQNDPADGPALVDALLAGPPDLAMVGGERVKRQDSRAKKIASKVGNGVRKRLLKDTANDTGCGLK
AFRREAFLRLPYFDHMHRYLPALMIREGFRSEFRPVNHRHRQTGRSKYTNLGRLWASLSDLVGVMWLQSRARIPGGFDEL

Specific function: Catalyzes the transfer of 4-deoxy-4-formamido-L- arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788588, Length=227, Percent_Identity=33.4801762114537, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1787259, Length=176, Percent_Identity=30.6818181818182, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1788692, Length=213, Percent_Identity=23.4741784037559, Blast_Score=65, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022857
- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: =2.7.8.30 [H]

Molecular weight: Translated: 26472; Mature: 26340

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPRPDISVVVPVFDEEGAAPALAREIAAAFRGRDFEIVFVDDASRDGTRAALQALKAEI
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHC
PQLRLVGHRKNAGQSRAIRTGVLAARGEVVVTLDGDGQNDPADGPALVDALLAGPPDLAM
CCEEEECCCCCCCCHHHHHHHHEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEH
VGGERVKRQDSRAKKIASKVGNGVRKRLLKDTANDTGCGLKAFRREAFLRLPYFDHMHRY
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
LPALMIREGFRSEFRPVNHRHRQTGRSKYTNLGRLWASLSDLVGVMWLQSRARIPGGFDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
L
C
>Mature Secondary Structure 
APRPDISVVVPVFDEEGAAPALAREIAAAFRGRDFEIVFVDDASRDGTRAALQALKAEI
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHC
PQLRLVGHRKNAGQSRAIRTGVLAARGEVVVTLDGDGQNDPADGPALVDALLAGPPDLAM
CCEEEECCCCCCCCHHHHHHHHEEECCCEEEEECCCCCCCCCCCHHHHHHHHCCCCCEEH
VGGERVKRQDSRAKKIASKVGNGVRKRLLKDTANDTGCGLKAFRREAFLRLPYFDHMHRY
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHH
LPALMIREGFRSEFRPVNHRHRQTGRSKYTNLGRLWASLSDLVGVMWLQSRARIPGGFDE
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA