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The map label for this gene is oxaA

Identifier: 197103856

GI number: 197103856

Start: 393070

End: 394866

Strand: Reverse

Name: oxaA

Synonym: PHZ_c0390

Alternate gene names: 197103856

Gene position: 394866-393070 (Counterclockwise)

Preceding gene: 197103857

Following gene: 197103855

Centisome position: 9.88

GC content: 68.39

Gene sequence:

>1797_bases
ATGCGTGACGACAACACCCGCAACACGATCATCTTCTTCGTGTGCGCGGCCCTCCTGCTGGTTCTGTACCAGGTCTTCGT
GATCGGGCCGGCCGACAAGCGCCGCCAGGCCGAGCTCGCGCGCCAGGCGCCGCCGGCCGCCGCCGCCCAGGCCGGACAGG
CGGGCGCGCCCGCCGCGCCCCAGGTCCCGCAGGCCATGACCCGCCAGGCCGCCGTCGCCGCGACGCCGCGGGTGAAGATC
GACACCCCGATGCTGACCGGCTCGCTGTCGCTGCGCGGCGCCCGCATCGACGACCTCTATCTCGACCGTTTCCGCCAGAC
GGTGGAGAAGGACTCCCCGCCGGTGGAGCTGCTGCGCCCCGAGGGCGCCCAGTATCCCTGGTTCGCCGAGGTCGGCTGGG
TCGGCGCGAACGTCCCGGGCCTGCCCGACTCGGGCGCCGTCTGGACCCTGGCCCAGGGCTCCACCCTGGCTCCCGGCCAG
CCCGTGGTCCTCACCTACGCCAACGGCCAGGGCCTGACCTTCACCCGTCGCATCGAGGTCGACGACCGCTACCTGTTCAC
GATCACCGACACCGTCGCCAACACGACGGGCCAGCCGGTCACCATCGCCCCCTACGGCACCGTCCAGCGCCAGGGCGTCC
CCGCCGACCTCGGCAAGAACCAGATCGTCCACGAGGGCGCCATCGGCTGGCTCGACGGCAAGCTGCGGCAGGTGAAGTAC
GGCAAGTGGCGCAAGGAAGGCGGCGGCCCGGCCTACAATTCGACCGGCGGCTGGCTCGGCATCACCGACAAGTACTGGCT
CGCCGCCCTGATCCCCGGCCAGCAGGAGGCCGTCACCGGCCAGTTCCGCCGCACCCAGGCGCCGGGCGTCGACGTGCTGG
ACGCCAACTTCGTCGGCGCGCCGGTCACCATCCCCGCCGGCCGCCAGGTCTCGGAGACCACCCGCTTCTTCGCCGGCGCC
AAGCAGGTGCCGATCCTGCGCGACTACGAGCAGTCGCTGGGCGTCGCCCACTTCGACAACGCCGTGGACTGGGGCAACTT
CTGGTTCCTGACCCGGCCGATCTTCCAGTTCCTGGAGTTCATCCACCGCTACATCGGCACCTTCGGCCTCGCCATCCTGG
CGCTGACCGTCGTCGTGCGGCTGATCTTCTTCCCGCTCGCCAACAAGCAGTACGAGTCGATCACCAAGATGAAGAAGGTG
CAGCCCCAGATGGAGGAGCTGCGCAAGAAATATAAGGACGATCCGGCCAAGCAGCAGCAGGAGCTGCTCGCCCTCTACCA
GCGCGAGAAGGTAAACCCGCTCGCCGGCTGCCTGCCGCTGCTGCTGCAGATCCCGGTCTTCTACGCCCTCTACAAGGTGC
TGACCGTCACCATCGAGATGCGGCACGCCCCCTTCATGGGCTGGATCCAGGACCTGTCGGCGCGCGATCCGACGACCATC
TGGAACCTGTTCGGCCTGATCCCGTGGGATCCGGCCTCGGCCCCGCTGATCGGCGCGTTCCTGAACGGGCCGCTGCACCT
GGGCGTGCTGCCGATCCTCTACGGCTTCACCATGTGGCTGACGATGGCCATGAGCCCGCCCGCCGGCGATCCGATCCAGC
AGAAGATCTTCCAGCTCATGCCGATCATCTTCACCTTCATCATGGCGCCCTTCGCCGTGGGCCTGCTGATCTACTGGACC
TGGTCCAACGTGCTGACCCTGCTGCAGCAGTACGTGATCATGCGCCGCTTCAAGGTGGACAACCCGATCGACCAGATCAT
CCGGAAGCTCACCGGCAAGCCGAAGCCGGCGGGTTGA

Upstream 100 bases:

>100_bases
GTTTGCTTGACGATGTGAAAAGCGCGCTGATAAGGCTCGCCGCCGACCGTGAGGCCCCCGAAGGCTAGGGCCCGCCCCCT
CTACGGATACCGTCCCCCGA

Downstream 100 bases:

>100_bases
GCATGACGGACGCGGTCTTCGACGCCGAAGAGCTGGAGGCCGCGCGCGTCCTGTTCGCGCACCCGGTGCGCTTCCTGATG
GGGGCAGTCGCGATCTCGGG

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 598

Protein sequence:

>598_residues
MRDDNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAPQVPQAMTRQAAVAATPRVKI
DTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGAQYPWFAEVGWVGANVPGLPDSGAVWTLAQGSTLAPGQ
PVVLTYANGQGLTFTRRIEVDDRYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKY
GKWRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAPVTIPAGRQVSETTRFFAGA
KQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFIHRYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKV
QPQMEELRKKYKDDPAKQQQELLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTI
WNLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLMPIIFTFIMAPFAVGLLIYWT
WSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPAG

Sequences:

>Translated_598_residues
MRDDNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAPQVPQAMTRQAAVAATPRVKI
DTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGAQYPWFAEVGWVGANVPGLPDSGAVWTLAQGSTLAPGQ
PVVLTYANGQGLTFTRRIEVDDRYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKY
GKWRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAPVTIPAGRQVSETTRFFAGA
KQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFIHRYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKV
QPQMEELRKKYKDDPAKQQQELLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTI
WNLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLMPIIFTFIMAPFAVGLLIYWT
WSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPAG
>Mature_598_residues
MRDDNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAPQVPQAMTRQAAVAATPRVKI
DTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRPEGAQYPWFAEVGWVGANVPGLPDSGAVWTLAQGSTLAPGQ
PVVLTYANGQGLTFTRRIEVDDRYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKY
GKWRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGAPVTIPAGRQVSETTRFFAGA
KQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEFIHRYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKV
QPQMEELRKKYKDDPAKQQQELLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTI
WNLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLMPIIFTFIMAPFAVGLLIYWT
WSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPAG

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=513, Percent_Identity=30.7992202729045, Blast_Score=231, Evalue=1e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_PHEZH (B4RDV5)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002129233.1
- GeneID:   6789880
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c0390
- HOGENOM:   HBG507812
- OMA:   FVTIEMR
- ProtClustDB:   PRK01318
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03593
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 66346; Mature: 66346

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1e28b7d4)-; HASH(0x1f547920)-; HASH(0x1f64b30c)-; HASH(0x1e043898)-; HASH(0x1f209f00)-;

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDDNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCC
QVPQAMTRQAAVAATPRVKIDTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRP
CCHHHHHHHHHHHCCCCEEECCCEEECCCEECCCCHHHHHHHHHHHHHHCCCCCCEEECC
EGAQYPWFAEVGWVGANVPGLPDSGAVWTLAQGSTLAPGQPVVLTYANGQGLTFTRRIEV
CCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEC
DDRYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKY
CCCEEEEEEHHHHCCCCCCEEEECCCCHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHC
GKWRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGA
CCCCCCCCCCCCCCCCCEEECCCHHEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCC
PVTIPAGRQVSETTRFFAGAKQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEF
CEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCCCCCEEHHHHHHHHHHHH
IHRYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKVQPQMEELRKKYKDDPAKQQQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
ELLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHH
WNLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLM
HHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
PIIFTFIMAPFAVGLLIYWTWSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH
>Mature Secondary Structure
MRDDNTRNTIIFFVCAALLLVLYQVFVIGPADKRRQAELARQAPPAAAAQAGQAGAPAAP
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCC
QVPQAMTRQAAVAATPRVKIDTPMLTGSLSLRGARIDDLYLDRFRQTVEKDSPPVELLRP
CCHHHHHHHHHHHCCCCEEECCCEEECCCEECCCCHHHHHHHHHHHHHHCCCCCCEEECC
EGAQYPWFAEVGWVGANVPGLPDSGAVWTLAQGSTLAPGQPVVLTYANGQGLTFTRRIEV
CCCCCCCCHHCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEEEEEEEC
DDRYLFTITDTVANTTGQPVTIAPYGTVQRQGVPADLGKNQIVHEGAIGWLDGKLRQVKY
CCCEEEEEEHHHHCCCCCCEEEECCCCHHCCCCCCCCCCCCEECCCCCCCCCCHHHHHHC
GKWRKEGGGPAYNSTGGWLGITDKYWLAALIPGQQEAVTGQFRRTQAPGVDVLDANFVGA
CCCCCCCCCCCCCCCCCEEECCCHHEEEEECCCCHHHHHHHHHHCCCCCCCEEECCCCCC
PVTIPAGRQVSETTRFFAGAKQVPILRDYEQSLGVAHFDNAVDWGNFWFLTRPIFQFLEF
CEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHCCEECCCCCCCCCCEEHHHHHHHHHHHH
IHRYIGTFGLAILALTVVVRLIFFPLANKQYESITKMKKVQPQMEELRKKYKDDPAKQQQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHH
ELLALYQREKVNPLAGCLPLLLQIPVFYALYKVLTVTIEMRHAPFMGWIQDLSARDPTTI
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHH
WNLFGLIPWDPASAPLIGAFLNGPLHLGVLPILYGFTMWLTMAMSPPAGDPIQQKIFQLM
HHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
PIIFTFIMAPFAVGLLIYWTWSNVLTLLQQYVIMRRFKVDNPIDQIIRKLTGKPKPAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA