| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103811
Identifier: 197103811
GI number: 197103811
Start: 348568
End: 349413
Strand: Reverse
Name: 197103811
Synonym: PHZ_c0345
Alternate gene names: NA
Gene position: 349413-348568 (Counterclockwise)
Preceding gene: 197103813
Following gene: 197103809
Centisome position: 8.74
GC content: 74.94
Gene sequence:
>846_bases ATGCGAAACCTTTTCTTGGCCTTGGCCCTGGCGACGGCGACCGCCGCCCCGTCCGTGTCGATCGCCCAGGACGCGGCCCA GCGCGCCGAGTGGAACCGGCCCGCCGCGCCGTTCCGGATCGCTGGCCCGGTCTACTACGTCGGGACCGAGGGCCTGGGCG CCTACCTCGTCGCCGACCCCGGCGGGCACGCGCTGATCGACGGCGGCCTGCCCGAGAGCGCGCCGCTGATCGCCGCCAAC ATCGAGGCGCTGGGCTTCAAGCTGGAGGACGTGCGCTACCTGCTGGTCAACCACGCCCACTTCGACCACGCGGGCGGCCT CGCCGAGCTGAAGCGCCGCACGGGCGCGGCGCTGGTCGCCAGCGCCGGCGATGCGCCCGACCTCGGGGCGGGCCGCACCC TCGGCCGCCCCGAGCTGGACGGCTTCCCCGCGGTCGCGGTGGATCAGGTCGTGGCCGACGGCGACACCCTGCGGCTCGGC CAGGCGTCGCTGACCGCCCACGTGACCCCCGGCCACACCCGCGGCTGCACCAGCTGGTCGCTGGCCGGCCCGTCCGGAAC GGTGCTGTTCGCCTGCAGCCTGACGGTGGCCGGCCAGAAGCTGCACGGCGATCCGGCCTATCCCGACGCCGCCGCCGACT TCCGGCGCACCTTCGCCCGCCTGCGGACGCTGCACGCCGACTACTTCCTCAACTTCCACCCCGAGTTCTTCGACATGGCC GGCAAGCGGGCCAGGCGCGCGGCGGGCGAGCCCGATCCCTTCCGCGACCCCGCCGAGCTGGCCCGCCAGGTCGACCGCGC CGAAGCCATGTTCGAACGCGAACTCGCCCGCCAGGCCGCCCGCTGA
Upstream 100 bases:
>100_bases TCCCGCCAGGAAAGGTCCTTTGCACTGCGCCCGGCGCCTGCGCCATCAAAGGGCGGCCGTCGGCCCGGCGCGCCGCCCGG CTGACGCGGGAGGGACCCTG
Downstream 100 bases:
>100_bases CGCCCCCTCTCCCCTTCCCGCTCTCCCCCGTGAAGCGGGGAGGGTCCGGGCGCACGGCATGCCCGGCTCGGCGCCCAGCT GGCGCAGCGAGGCGCCGTCG
Product: metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Beta-lactamase type II; Penicillinase [H]
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MRNLFLALALATATAAPSVSIAQDAAQRAEWNRPAAPFRIAGPVYYVGTEGLGAYLVADPGGHALIDGGLPESAPLIAAN IEALGFKLEDVRYLLVNHAHFDHAGGLAELKRRTGAALVASAGDAPDLGAGRTLGRPELDGFPAVAVDQVVADGDTLRLG QASLTAHVTPGHTRGCTSWSLAGPSGTVLFACSLTVAGQKLHGDPAYPDAAADFRRTFARLRTLHADYFLNFHPEFFDMA GKRARRAAGEPDPFRDPAELARQVDRAEAMFERELARQAAR
Sequences:
>Translated_281_residues MRNLFLALALATATAAPSVSIAQDAAQRAEWNRPAAPFRIAGPVYYVGTEGLGAYLVADPGGHALIDGGLPESAPLIAAN IEALGFKLEDVRYLLVNHAHFDHAGGLAELKRRTGAALVASAGDAPDLGAGRTLGRPELDGFPAVAVDQVVADGDTLRLG QASLTAHVTPGHTRGCTSWSLAGPSGTVLFACSLTVAGQKLHGDPAYPDAAADFRRTFARLRTLHADYFLNFHPEFFDMA GKRARRAAGEPDPFRDPAELARQVDRAEAMFERELARQAAR >Mature_281_residues MRNLFLALALATATAAPSVSIAQDAAQRAEWNRPAAPFRIAGPVYYVGTEGLGAYLVADPGGHALIDGGLPESAPLIAAN IEALGFKLEDVRYLLVNHAHFDHAGGLAELKRRTGAALVASAGDAPDLGAGRTLGRPELDGFPAVAVDQVVADGDTLRLG QASLTAHVTPGHTRGCTSWSLAGPSGTVLFACSLTVAGQKLHGDPAYPDAAADFRRTFARLRTLHADYFLNFHPEFFDMA GKRARRAAGEPDPFRDPAELARQVDRAEAMFERELARQAAR
Specific function: Has a high activity against imipenem [H]
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001018 - InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.5.2.6 [H]
Molecular weight: Translated: 29745; Mature: 29745
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNLFLALALATATAAPSVSIAQDAAQRAEWNRPAAPFRIAGPVYYVGTEGLGAYLVADP CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCEEEEECC GGHALIDGGLPESAPLIAANIEALGFKLEDVRYLLVNHAHFDHAGGLAELKRRTGAALVA CCCEEEECCCCCCCCEEEECHHHHCEEHHHHHEEEHCCCCCCCCCCHHHHHHHCCCEEEE SAGDAPDLGAGRTLGRPELDGFPAVAVDQVVADGDTLRLGQASLTAHVTPGHTRGCTSWS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCEE LAGPSGTVLFACSLTVAGQKLHGDPAYPDAAADFRRTFARLRTLHADYFLNFHPEFFDMA ECCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH GKRARRAAGEPDPFRDPAELARQVDRAEAMFERELARQAAR HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRNLFLALALATATAAPSVSIAQDAAQRAEWNRPAAPFRIAGPVYYVGTEGLGAYLVADP CCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCEEECCCEEEEECCCCCEEEEECC GGHALIDGGLPESAPLIAANIEALGFKLEDVRYLLVNHAHFDHAGGLAELKRRTGAALVA CCCEEEECCCCCCCCEEEECHHHHCEEHHHHHEEEHCCCCCCCCCCHHHHHHHCCCEEEE SAGDAPDLGAGRTLGRPELDGFPAVAVDQVVADGDTLRLGQASLTAHVTPGHTRGCTSWS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEEEECCCCCCCCCCEE LAGPSGTVLFACSLTVAGQKLHGDPAYPDAAADFRRTFARLRTLHADYFLNFHPEFFDMA ECCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEECCCHHHHHH GKRARRAAGEPDPFRDPAELARQVDRAEAMFERELARQAAR HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8018721; 3931629; 9811546 [H]