Click here to switch to the map view.

The map label for this gene is yfbS [C]

Identifier: 197103806

GI number: 197103806

Start: 341267

End: 343054

Strand: Direct

Name: yfbS [C]

Synonym: PHZ_c0340

Alternate gene names: 197103806

Gene position: 341267-343054 (Clockwise)

Preceding gene: 197103805

Following gene: 197103807

Centisome position: 8.54

GC content: 72.2

Gene sequence:

>1788_bases
ATGCCTATGACATTGCAGCAGGCCCTGGCCTTCGGGCTGGTGGGCGCGACCATCGTGGCCTTCATCTGGGGGCGGTGGCG
TTACGACGTGATCGCGCTTTCGGCCCTCGGCCTGGGGCTCGTCCTGGGCGTCGTCCCCGCCGAGGACGCCTTCTCGGGCT
TCGCCAACGATGTCACCGTCATCATCGCCTGCGCCCTGGTGGTCAGCGCCGCGTTCGCCCGCTCCGGGATCGTCGAGGCG
GCCCTGCGGCCGCTTCTGCCCCGGCTGACCAGCGCCCGCACCCAGGTCCCCTTGTTCGCCGGCGTCGTGGCCCTGCTCTC
CATGGTGACCAAGAACGTCGGCGCCCTGGCGCTGATGATGCCGATCGCCCTGCAGACCGCCCGGCGGACGAACGTCTCCC
CGTCCTGCCTGCTGATGCCCATGGCCTTCGCCTCCCTGATCGGCGGGACCGTGACCATGGTCGGCACCTCGCCGAACATC
CTGGTCTCCGAGGTCCGCCAGCAGGTCCTGGGCGAGCCGTTCCAGATGTACGACTACGCGCCGGTGGGTCTGGCGCTGAC
GGCGCTGGGGCTCGTTTTCCTGGCCTTCGCCTACCGCCTGCTGCCGACCACCCGGACCGCCACCGAGACCCTCGACACCG
CCATCGAGACGGCGCCCTACGTCACCCAGGTCTCCGCCCCCGAGGACTGGACCCTGGAGAAGCGGGCGGTCCGCAATCTC
CAGGCGCTGGGCCAGGGCGAGGTCCGCATCTTGGCGCTCATCCGCGACGGCGAGCGGCGGGCGCAGCCGCACCCGAACGT
CCGCGTCCGCCCAGGGGACAAGCTGCTGGTCGAGGGCGAGCACCAGGCGCTCGACACCTTCATCACCCGGGCCAAGCTCA
AGCACAGCCGCGCCGATCGCCCGGTCGCCACCGAGGAGCCCACCGAGGAGACCCGGGTCGTGGAGGCGATCGTGGGCTCC
GACTCCATGCTGATCGGCCGCTCCGCCAAACAGGAGGACCTCTACGGCCAGCACGGCGTGAACCTGCTGGCCGTCAGCCG
CTCGGGCTACCGCACGACCGTCGAGCTCAAGGGCATGCGGCTCCGCGCCGGCGACGTGGTGGTCCTGCAGGGCGGGGAGC
GCACCCTGCCGGGCGCGCTGAAGACCCTCGGCCTGCTGCCGCTCGCCGAGCGCGACGTGCGTCTGGGCGGAATCCGTCGC
CGGGTCGCCCCGGCGCTGATCCTGCTCACGGCCATGGTGCTGGTGGCGGTGCAGGCCGCGCCGGTGGCCATCGCCTTCTT
CGCCGCGGCCGTGGCCATGGTGCTGGTCGGCGCGATCCGCATGCGCGAGGCCTATTCGGCGCTCGACGGCCCGGTGCTGG
TGCTGATCGCCGCCCTGATCCCGGTGTCGGACGCGATCCGCGCCACCGGCGGCGCCGAGCTCATCGCCTCGGCCCTGGCC
CAGGCGTTCGAAGGCCGCCCGCCGATCCTGGCGCTGGGCGCGGTGATGGCCGTCTCCATGGCCGCCACGCCCTTCCTGAA
CAACGCCGCCACGGTCCTGATCGTGGCTCCGGTCGGCGCGGCCCTGGCCCGGCTGCTGGGCCTGCATCCCGATCCGTTCC
TGATGGCGGTGGCGGTCGGGGCGGCCTGCGACTTCCTCACGCCCATCGGCCACCAGTGCAACACCCTGGTCATGGCGCCG
GGGGGCTACCGCTTCGCCGACTACCCCAGGTTGGGGGCGCCGCTGACCGCTCTCGTCCTGCTTGTCGGAACCCCGCTGAT
CGCCGCCGTCTGGCCCCTCCAGGGTTGA

Upstream 100 bases:

>100_bases
GGCGGCGATCCGGCCCTGCTCAACCTCGACGCCTGACGGCGCAGCCGGACGGCCCGAGCCGCGTTCTACATTCCTGAGCC
GGCCCGCGCCGGCGCGAGGG

Downstream 100 bases:

>100_bases
GTTCACACTCTCGTGAGTCCGGCCGCCGCCCGGCCGGCCAAACGATTGATCTGCCGAGGGGCCGCTCGCCGTGTTAACCT
CTGGTTTACGAAAAAGCCTG

Product: di- and tricarboxylate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 595; Mature: 594

Protein sequence:

>595_residues
MPMTLQQALAFGLVGATIVAFIWGRWRYDVIALSALGLGLVLGVVPAEDAFSGFANDVTVIIACALVVSAAFARSGIVEA
ALRPLLPRLTSARTQVPLFAGVVALLSMVTKNVGALALMMPIALQTARRTNVSPSCLLMPMAFASLIGGTVTMVGTSPNI
LVSEVRQQVLGEPFQMYDYAPVGLALTALGLVFLAFAYRLLPTTRTATETLDTAIETAPYVTQVSAPEDWTLEKRAVRNL
QALGQGEVRILALIRDGERRAQPHPNVRVRPGDKLLVEGEHQALDTFITRAKLKHSRADRPVATEEPTEETRVVEAIVGS
DSMLIGRSAKQEDLYGQHGVNLLAVSRSGYRTTVELKGMRLRAGDVVVLQGGERTLPGALKTLGLLPLAERDVRLGGIRR
RVAPALILLTAMVLVAVQAAPVAIAFFAAAVAMVLVGAIRMREAYSALDGPVLVLIAALIPVSDAIRATGGAELIASALA
QAFEGRPPILALGAVMAVSMAATPFLNNAATVLIVAPVGAALARLLGLHPDPFLMAVAVGAACDFLTPIGHQCNTLVMAP
GGYRFADYPRLGAPLTALVLLVGTPLIAAVWPLQG

Sequences:

>Translated_595_residues
MPMTLQQALAFGLVGATIVAFIWGRWRYDVIALSALGLGLVLGVVPAEDAFSGFANDVTVIIACALVVSAAFARSGIVEA
ALRPLLPRLTSARTQVPLFAGVVALLSMVTKNVGALALMMPIALQTARRTNVSPSCLLMPMAFASLIGGTVTMVGTSPNI
LVSEVRQQVLGEPFQMYDYAPVGLALTALGLVFLAFAYRLLPTTRTATETLDTAIETAPYVTQVSAPEDWTLEKRAVRNL
QALGQGEVRILALIRDGERRAQPHPNVRVRPGDKLLVEGEHQALDTFITRAKLKHSRADRPVATEEPTEETRVVEAIVGS
DSMLIGRSAKQEDLYGQHGVNLLAVSRSGYRTTVELKGMRLRAGDVVVLQGGERTLPGALKTLGLLPLAERDVRLGGIRR
RVAPALILLTAMVLVAVQAAPVAIAFFAAAVAMVLVGAIRMREAYSALDGPVLVLIAALIPVSDAIRATGGAELIASALA
QAFEGRPPILALGAVMAVSMAATPFLNNAATVLIVAPVGAALARLLGLHPDPFLMAVAVGAACDFLTPIGHQCNTLVMAP
GGYRFADYPRLGAPLTALVLLVGTPLIAAVWPLQG
>Mature_594_residues
PMTLQQALAFGLVGATIVAFIWGRWRYDVIALSALGLGLVLGVVPAEDAFSGFANDVTVIIACALVVSAAFARSGIVEAA
LRPLLPRLTSARTQVPLFAGVVALLSMVTKNVGALALMMPIALQTARRTNVSPSCLLMPMAFASLIGGTVTMVGTSPNIL
VSEVRQQVLGEPFQMYDYAPVGLALTALGLVFLAFAYRLLPTTRTATETLDTAIETAPYVTQVSAPEDWTLEKRAVRNLQ
ALGQGEVRILALIRDGERRAQPHPNVRVRPGDKLLVEGEHQALDTFITRAKLKHSRADRPVATEEPTEETRVVEAIVGSD
SMLIGRSAKQEDLYGQHGVNLLAVSRSGYRTTVELKGMRLRAGDVVVLQGGERTLPGALKTLGLLPLAERDVRLGGIRRR
VAPALILLTAMVLVAVQAAPVAIAFFAAAVAMVLVGAIRMREAYSALDGPVLVLIAALIPVSDAIRATGGAELIASALAQ
AFEGRPPILALGAVMAVSMAATPFLNNAATVLIVAPVGAALARLLGLHPDPFLMAVAVGAACDFLTPIGHQCNTLVMAPG
GYRFADYPRLGAPLTALVLLVGTPLIAAVWPLQG

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=638, Percent_Identity=27.2727272727273, Blast_Score=179, Evalue=4e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 62594; Mature: 62463

Theoretical pI: Translated: 9.32; Mature: 9.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMTLQQALAFGLVGATIVAFIWGRWRYDVIALSALGLGLVLGVVPAEDAFSGFANDVTV
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IIACALVVSAAFARSGIVEAALRPLLPRLTSARTQVPLFAGVVALLSMVTKNVGALALMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
PIALQTARRTNVSPSCLLMPMAFASLIGGTVTMVGTSPNILVSEVRQQVLGEPFQMYDYA
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCHHHHCCC
PVGLALTALGLVFLAFAYRLLPTTRTATETLDTAIETAPYVTQVSAPEDWTLEKRAVRNL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH
QALGQGEVRILALIRDGERRAQPHPNVRVRPGDKLLVEGEHQALDTFITRAKLKHSRADR
HHCCCCCEEEEEEEECCHHHCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCC
PVATEEPTEETRVVEAIVGSDSMLIGRSAKQEDLYGQHGVNLLAVSRSGYRTTVELKGMR
CCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHCCHHCCCEEEEEECCCCEEEEEEECEE
LRAGDVVVLQGGERTLPGALKTLGLLPLAERDVRLGGIRRRVAPALILLTAMVLVAVQAA
EECCCEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVAIAFFAAAVAMVLVGAIRMREAYSALDGPVLVLIAALIPVSDAIRATGGAELIASALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QAFEGRPPILALGAVMAVSMAATPFLNNAATVLIVAPVGAALARLLGLHPDPFLMAVAVG
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHH
AACDFLTPIGHQCNTLVMAPGGYRFADYPRLGAPLTALVLLVGTPLIAAVWPLQG
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCC
>Mature Secondary Structure 
PMTLQQALAFGLVGATIVAFIWGRWRYDVIALSALGLGLVLGVVPAEDAFSGFANDVTV
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
IIACALVVSAAFARSGIVEAALRPLLPRLTSARTQVPLFAGVVALLSMVTKNVGALALMM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHHHHHH
PIALQTARRTNVSPSCLLMPMAFASLIGGTVTMVGTSPNILVSEVRQQVLGEPFQMYDYA
HHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCCHHHHCCC
PVGLALTALGLVFLAFAYRLLPTTRTATETLDTAIETAPYVTQVSAPEDWTLEKRAVRNL
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH
QALGQGEVRILALIRDGERRAQPHPNVRVRPGDKLLVEGEHQALDTFITRAKLKHSRADR
HHCCCCCEEEEEEEECCHHHCCCCCCEEECCCCEEEECCCHHHHHHHHHHHHHHHHCCCC
PVATEEPTEETRVVEAIVGSDSMLIGRSAKQEDLYGQHGVNLLAVSRSGYRTTVELKGMR
CCCCCCCCHHHHHHHHHHCCCCEEECCCCCHHHCCHHCCCEEEEEECCCCEEEEEEECEE
LRAGDVVVLQGGERTLPGALKTLGLLPLAERDVRLGGIRRRVAPALILLTAMVLVAVQAA
EECCCEEEECCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVAIAFFAAAVAMVLVGAIRMREAYSALDGPVLVLIAALIPVSDAIRATGGAELIASALA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
QAFEGRPPILALGAVMAVSMAATPFLNNAATVLIVAPVGAALARLLGLHPDPFLMAVAVG
HHHCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHHHHCCCCCHHHHHHHHH
AACDFLTPIGHQCNTLVMAPGGYRFADYPRLGAPLTALVLLVGTPLIAAVWPLQG
HHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]