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The map label for this gene is pdtaS [H]

Identifier: 197103766

GI number: 197103766

Start: 293953

End: 295605

Strand: Reverse

Name: pdtaS [H]

Synonym: PHZ_c0300

Alternate gene names: 197103766

Gene position: 295605-293953 (Counterclockwise)

Preceding gene: 197103767

Following gene: 197103765

Centisome position: 7.4

GC content: 74.29

Gene sequence:

>1653_bases
GTGCTGGTGCTGGGCGTGCTGCAGTCGGTGATCGGCTTCCAGCGCGAAGGCCGCGTGCTGCGCGAGAACCTCGGCTTCGC
CGCCGAGCGGAGCGCGGCCACGGCGCGCGCGCGAATGGAAAGCGCCGACGTGCTGCTGCAGACGCTCGCCCCGGGCGCGG
TCGGCTTCCAGTGCGCCCAGCGGCTCGACCAGGTGACGCGGCGGATCCCCGGCTACCTCAACCTCGTCCGGTTCGACCGG
CAGGGACGGGTGGTCTGCGCGGCCGGCTCGGTCCCGGCCGACCCGCAGCGATCCGCCCGCCCCTGGTTCCTCCAGCTCCA
GGCGGGCGACCAGCTCGCCATCACCCGCGACCCCGGCTCGGCCTATGCGGCCGAGCCGGCGGTGCTGACCGCGGTGCGCG
CCGCCGCGCCGGACGGCCGGTTCGACGGCGCCTTCGTGGCGGTGATCGCGCTCTCCAGCCTGCAGCCCTCGGTGACCGAC
CCCTCGCTGCCGCGCGGCGCCGAGGTGGGGCTGGTCGAGCGCACCGGGCGCTACATCACCATGACCAAGCCCAGCGCCTT
CCCGGCCCTGCCGCAGGACTGGCGCGCGCAGGTCAAGGCCCAGGGTTCGCTCGTCTGGTACGGCCGCGACGCCGAGGGGC
GCCGACGGGTCTATTCCGCCGCCCCGGTGGTGGGCGACGAGGTCTATGTGGTGCTGTCGGCCAACTCGCCGGGCATCCTC
TCGTGGGCCTGGCTGAACCCGCTGACCGGCATCCTCTTCCCGCTGCTGACCTTCGCCCTCGCCCTGGCCGCGGTGTCCGT
GGTGACCGACCGGGTCGTGGTGCGCTGGATCGCCTATCTGCAGCGGATCGCGGCGCTCTACGCCCGCGGCCGGCTGAGCG
TGCGCCCGGTGCAGGCCGAGCAGATGCCGCCCGAGATCCGCGACCTGGCCGAGACCATGGAGGACATGGCCGACGCCATC
GTCGGGCGCGACGCCTCCCTGCGCGACAGCCTGGCGCAGAAGGACGCGCTGATGCGCGAGATCCACCACCGGGTGAAGAA
CAACCTGCAGGTCATCTCGTCCCTCTTGAACATGCAGCAGCGGTCGCTGTCCGACCCGGCCGCCCGCTCGGCGATGAGCG
ACACGCGCCAGCGGATCACGGCCCTCGCCCTGATCTACCGGGCGCTCTACCAGGGCCCGGACCTGAAGCGCGTCGACCTG
CGCCCGTTCCTCGAGGAGCTGACGGCGCAGCTCGTCTCGGGCGATCTGGTGCACGGCCCGGCGGTGCGCACCGAGATGGC
CGTCGAGCCGCTGGTGATCGATCCCGACCGCCTCGCCCCGCTCGCCCTGTTCGCCGTCGAGGCGATCACCAACGCCCAGA
AGCACGCCTTCGCCGCGCGCGGCGGCGTGCTGAGCGTGAGCTTCAGCGTCCGCGGCGACGAAGCCGAGCTCGCCATCTCG
GACGACGGCCAGGTCAGCGACGAGGCCCTGGCGGCGGCCGGCGTCGGCCGCACGCTGATGACCGCCTTCGCGCGCCAGCT
GCGCGGCCGGGCCGAGCTGGTGCGCAACGGCCGCGGCGGGGTCACCGCCCGGCTGGTCTTCCCGACGCCGGCCGCCGACC
TGCCGCACGGCGCCGCCTCCGGGGGACCGGCGGGGAACCAGGCTGCGGCCTAG

Upstream 100 bases:

>100_bases
TAAGGGACGGATCAGGCCGTTGAAACTCCGCCTGTCCAAGGGATCGCTGAGCACGATCCGGGTCCGCCTGATCGCGGCCC
TGGCGGCTGCGCTGCTGCCC

Downstream 100 bases:

>100_bases
GCGTTGCCGCCACGCCAGTTCCTCACTGAGAAAACCCGGAGATTCCACCCAATGCGCAAGGTTCTGATCATGGCGGCGTT
CGCCGCCAGCCTGGCCGTCT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 550; Mature: 550

Protein sequence:

>550_residues
MLVLGVLQSVIGFQREGRVLRENLGFAAERSAATARARMESADVLLQTLAPGAVGFQCAQRLDQVTRRIPGYLNLVRFDR
QGRVVCAAGSVPADPQRSARPWFLQLQAGDQLAITRDPGSAYAAEPAVLTAVRAAAPDGRFDGAFVAVIALSSLQPSVTD
PSLPRGAEVGLVERTGRYITMTKPSAFPALPQDWRAQVKAQGSLVWYGRDAEGRRRVYSAAPVVGDEVYVVLSANSPGIL
SWAWLNPLTGILFPLLTFALALAAVSVVTDRVVVRWIAYLQRIAALYARGRLSVRPVQAEQMPPEIRDLAETMEDMADAI
VGRDASLRDSLAQKDALMREIHHRVKNNLQVISSLLNMQQRSLSDPAARSAMSDTRQRITALALIYRALYQGPDLKRVDL
RPFLEELTAQLVSGDLVHGPAVRTEMAVEPLVIDPDRLAPLALFAVEAITNAQKHAFAARGGVLSVSFSVRGDEAELAIS
DDGQVSDEALAAAGVGRTLMTAFARQLRGRAELVRNGRGGVTARLVFPTPAADLPHGAASGGPAGNQAAA

Sequences:

>Translated_550_residues
MLVLGVLQSVIGFQREGRVLRENLGFAAERSAATARARMESADVLLQTLAPGAVGFQCAQRLDQVTRRIPGYLNLVRFDR
QGRVVCAAGSVPADPQRSARPWFLQLQAGDQLAITRDPGSAYAAEPAVLTAVRAAAPDGRFDGAFVAVIALSSLQPSVTD
PSLPRGAEVGLVERTGRYITMTKPSAFPALPQDWRAQVKAQGSLVWYGRDAEGRRRVYSAAPVVGDEVYVVLSANSPGIL
SWAWLNPLTGILFPLLTFALALAAVSVVTDRVVVRWIAYLQRIAALYARGRLSVRPVQAEQMPPEIRDLAETMEDMADAI
VGRDASLRDSLAQKDALMREIHHRVKNNLQVISSLLNMQQRSLSDPAARSAMSDTRQRITALALIYRALYQGPDLKRVDL
RPFLEELTAQLVSGDLVHGPAVRTEMAVEPLVIDPDRLAPLALFAVEAITNAQKHAFAARGGVLSVSFSVRGDEAELAIS
DDGQVSDEALAAAGVGRTLMTAFARQLRGRAELVRNGRGGVTARLVFPTPAADLPHGAASGGPAGNQAAA
>Mature_550_residues
MLVLGVLQSVIGFQREGRVLRENLGFAAERSAATARARMESADVLLQTLAPGAVGFQCAQRLDQVTRRIPGYLNLVRFDR
QGRVVCAAGSVPADPQRSARPWFLQLQAGDQLAITRDPGSAYAAEPAVLTAVRAAAPDGRFDGAFVAVIALSSLQPSVTD
PSLPRGAEVGLVERTGRYITMTKPSAFPALPQDWRAQVKAQGSLVWYGRDAEGRRRVYSAAPVVGDEVYVVLSANSPGIL
SWAWLNPLTGILFPLLTFALALAAVSVVTDRVVVRWIAYLQRIAALYARGRLSVRPVQAEQMPPEIRDLAETMEDMADAI
VGRDASLRDSLAQKDALMREIHHRVKNNLQVISSLLNMQQRSLSDPAARSAMSDTRQRITALALIYRALYQGPDLKRVDL
RPFLEELTAQLVSGDLVHGPAVRTEMAVEPLVIDPDRLAPLALFAVEAITNAQKHAFAARGGVLSVSFSVRGDEAELAIS
DDGQVSDEALAAAGVGRTLMTAFARQLRGRAELVRNGRGGVTARLVFPTPAADLPHGAASGGPAGNQAAA

Specific function: Member of the two-component regulatory system pdtaR/pdtaS. Autophosphorylates, probably on a histidine residue, and transfers its phosphate group to pdtaR [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR022066
- InterPro:   IPR011495
- InterPro:   IPR005467 [H]

Pfam domain/function: PF12282 H_kinase_N; PF02518 HATPase_c; PF07568 HisKA_2 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 58991; Mature: 58991

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: PS50885 HAMP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLGVLQSVIGFQREGRVLRENLGFAAERSAATARARMESADVLLQTLAPGAVGFQCAQ
CHHHHHHHHHHCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RLDQVTRRIPGYLNLVRFDRQGRVVCAAGSVPADPQRSARPWFLQLQAGDQLAITRDPGS
HHHHHHHHCCCHHHHEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC
AYAAEPAVLTAVRAAAPDGRFDGAFVAVIALSSLQPSVTDPSLPRGAEVGLVERTGRYIT
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEE
MTKPSAFPALPQDWRAQVKAQGSLVWYGRDAEGRRRVYSAAPVVGDEVYVVLSANSPGIL
EECCCCCCCCCHHHHHHHEECCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCEE
SWAWLNPLTGILFPLLTFALALAAVSVVTDRVVVRWIAYLQRIAALYARGRLSVRPVQAE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHH
QMPPEIRDLAETMEDMADAIVGRDASLRDSLAQKDALMREIHHRVKNNLQVISSLLNMQQ
HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLSDPAARSAMSDTRQRITALALIYRALYQGPDLKRVDLRPFLEELTAQLVSGDLVHGP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
AVRTEMAVEPLVIDPDRLAPLALFAVEAITNAQKHAFAARGGVLSVSFSVRGDEAELAIS
CHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEC
DDGQVSDEALAAAGVGRTLMTAFARQLRGRAELVRNGRGGVTARLVFPTPAADLPHGAAS
CCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC
GGPAGNQAAA
CCCCCCCCCC
>Mature Secondary Structure
MLVLGVLQSVIGFQREGRVLRENLGFAAERSAATARARMESADVLLQTLAPGAVGFQCAQ
CHHHHHHHHHHCHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RLDQVTRRIPGYLNLVRFDRQGRVVCAAGSVPADPQRSARPWFLQLQAGDQLAITRDPGS
HHHHHHHHCCCHHHHEEECCCCCEEEECCCCCCCCCCCCCCEEEEEECCCEEEEEECCCC
AYAAEPAVLTAVRAAAPDGRFDGAFVAVIALSSLQPSVTDPSLPRGAEVGLVERTGRYIT
CCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCEEE
MTKPSAFPALPQDWRAQVKAQGSLVWYGRDAEGRRRVYSAAPVVGDEVYVVLSANSPGIL
EECCCCCCCCCHHHHHHHEECCCEEEEECCCCCHHHHHHCCCCCCCCEEEEEECCCCCEE
SWAWLNPLTGILFPLLTFALALAAVSVVTDRVVVRWIAYLQRIAALYARGRLSVRPVQAE
EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHH
QMPPEIRDLAETMEDMADAIVGRDASLRDSLAQKDALMREIHHRVKNNLQVISSLLNMQQ
HCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSLSDPAARSAMSDTRQRITALALIYRALYQGPDLKRVDLRPFLEELTAQLVSGDLVHGP
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
AVRTEMAVEPLVIDPDRLAPLALFAVEAITNAQKHAFAARGGVLSVSFSVRGDEAELAIS
CHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEEC
DDGQVSDEALAAAGVGRTLMTAFARQLRGRAELVRNGRGGVTARLVFPTPAADLPHGAAS
CCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHCCCCCEEEEEEECCCCCCCCCCCCC
GGPAGNQAAA
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]