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The map label for this gene is cycY [H]

Identifier: 197103752

GI number: 197103752

Start: 279071

End: 279421

Strand: Direct

Name: cycY [H]

Synonym: PHZ_c0286

Alternate gene names: 197103752

Gene position: 279071-279421 (Clockwise)

Preceding gene: 197103748

Following gene: 197103753

Centisome position: 6.98

GC content: 70.66

Gene sequence:

>351_bases
ATGTCCCGCGCCGCCCTCGCCCTTCCGGCCCTCGTCTTGGCCGCCGCCGCGCTCGCCGCCCCGGCCTCGGCCGCCGACGG
GCAGCAGCTGTTCAACATGCAGTGCAAGATGTGCCACACGGGCGGGCCGATGGGGCCGAGCCTCGCGGGCGTGGCGGGGG
CCAAGATCGCCTCGAAGGACTTCGCCTATTCGCCGGCGCTGAAGGCCAAGGAGGGGACCTGGACCCCGGCCAACCTCGAC
GCCTTTCTGAAGGCCCCGACGGCCTTCGCCCCCGGCACCAAGATGATGATCTCGGTGCCCGACGACGAGAGCCGCGCGGC
GATCGTCGACTACCTCAAGACTCTGAAGTAG

Upstream 100 bases:

>100_bases
GGGCCCCCGGAAGCGCCGGGCGATCCTCCGGAGAATCGCTCTGGCGGAACGCCGGCTCCGCCGCTATTCCGTACCGCCTT
TACGAATTTCAGGAGACCCG

Downstream 100 bases:

>100_bases
GCCCTCGGGGATGGACGCCTTCCCCGCCTTCTTCCCGCTCGCCGGCCGCACGGTGGTGATCGCGGGCGAGGGCGAGGGCG
CCGAGGCCAAGGCCCGGCTG

Product: cytochrome c family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MSRAALALPALVLAAAALAAPASAADGQQLFNMQCKMCHTGGPMGPSLAGVAGAKIASKDFAYSPALKAKEGTWTPANLD
AFLKAPTAFAPGTKMMISVPDDESRAAIVDYLKTLK

Sequences:

>Translated_116_residues
MSRAALALPALVLAAAALAAPASAADGQQLFNMQCKMCHTGGPMGPSLAGVAGAKIASKDFAYSPALKAKEGTWTPANLD
AFLKAPTAFAPGTKMMISVPDDESRAAIVDYLKTLK
>Mature_115_residues
SRAALALPALVLAAAALAAPASAADGQQLFNMQCKMCHTGGPMGPSLAGVAGAKIASKDFAYSPALKAKEGTWTPANLDA
FLKAPTAFAPGTKMMISVPDDESRAAIVDYLKTLK

Specific function: Electron transfer pathways that operates during photosynthesis [H]

COG id: COG3474

COG function: function code C; Cytochrome c2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Drosophila melanogaster, GI17137204, Length=104, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002327
- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 11837; Mature: 11706

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAALALPALVLAAAALAAPASAADGQQLFNMQCKMCHTGGPMGPSLAGVAGAKIASKD
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC
FAYSPALKAKEGTWTPANLDAFLKAPTAFAPGTKMMISVPDDESRAAIVDYLKTLK
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
SRAALALPALVLAAAALAAPASAADGQQLFNMQCKMCHTGGPMGPSLAGVAGAKIASKD
CCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCC
FAYSPALKAKEGTWTPANLDAFLKAPTAFAPGTKMMISVPDDESRAAIVDYLKTLK
CCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8385603 [H]