Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is bioY [H]

Identifier: 197103721

GI number: 197103721

Start: 255537

End: 256106

Strand: Reverse

Name: bioY [H]

Synonym: PHZ_c0255

Alternate gene names: 197103721

Gene position: 256106-255537 (Counterclockwise)

Preceding gene: 197103722

Following gene: 197103720

Centisome position: 6.41

GC content: 78.6

Gene sequence:

>570_bases
ATGACCGCCGCCCTTCCCCTTCGCCTGACGACCGCCCCGTTCTGGGCCCGGCTCGCCGCCGTGGCCGGCGGGGCGGGCGT
GATGGCGCTCGCCTCGCAGGCCGCGATCCCGATGCAGCCGGTCCCGCTGACCCTGCAGACCCTCGCCCTCTTCGTGCTGG
CGGCGGTCCTCGGCGGCTCGCTGACGCTCCGGGCCGTGCTGATCTGGCTGACCGCCGCCGCGCTGGGCGCGCCGGTGCTG
GCCGACGGCGAGGGCGGGGCCGCGGCGCTGTTCGGGCCGGCCCAGGGCTACCTCTTCGGCATGGCCGTGGCCGGCGCCCT
GGCGGGCCACGCCGCGGCCCGGCGGCAGGACGTCGCCGGCCTCTTCGCCATCTTCCTCGTGGGCCACGCCGTGGTGCTGG
CGGTGGGCTGGCTCGGGCTCCTCGAGCGGCTGCCCCCGCGCGAGGCGTTCGTCGCCGGCGTCCTGCCCTTCCTGCCGGGC
GCGGCCCTCAAGTCGCTCGCCGCGGCGGGCCTCGTCCGCCTCGTGGCGCTGGCCCTCGCCCGCCACGCCGCGCTAAGGGC
TGACGCATGA

Upstream 100 bases:

>100_bases
AGCCGCAAGATGGTCTGGCTGGCGTGACGGCGTCCTCCTCTCCCGCCCGTTTCGCGAGGGGAGAGGAGAGATCAGCTTCC
GTGCTATCCGCTGCAGGCCC

Downstream 100 bases:

>100_bases
AGTTCCTCGACCAGGTGAAGATCTACGTCCGCTCGGGCAACGGCGGCGCCGGCGCCGTCTCGTTCCGGCGCGAGAAGTAC
ATCGAGTACGGCGGCCCCGA

Product: conserved hypothetical biotin synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MTAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGSLTLRAVLIWLTAAALGAPVL
ADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAGLFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPG
AALKSLAAAGLVRLVALALARHAALRADA

Sequences:

>Translated_189_residues
MTAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGSLTLRAVLIWLTAAALGAPVL
ADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAGLFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPG
AALKSLAAAGLVRLVALALARHAALRADA
>Mature_188_residues
TAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGSLTLRAVLIWLTAAALGAPVLA
DGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAGLFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPGA
ALKSLAAAGLVRLVALALARHAALRADA

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 18805; Mature: 18674

Theoretical pI: Translated: 11.92; Mature: 11.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGS
CCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCH
LTLRAVLIWLTAAALGAPVLADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAG
HHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPGAALKSLAAAGLVRLVALALA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RHAALRADA
HHHHHHCCC
>Mature Secondary Structure 
TAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGS
CCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCH
LTLRAVLIWLTAAALGAPVLADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAG
HHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPGAALKSLAAAGLVRLVALALA
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RHAALRADA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]