| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is bioY [H]
Identifier: 197103721
GI number: 197103721
Start: 255537
End: 256106
Strand: Reverse
Name: bioY [H]
Synonym: PHZ_c0255
Alternate gene names: 197103721
Gene position: 256106-255537 (Counterclockwise)
Preceding gene: 197103722
Following gene: 197103720
Centisome position: 6.41
GC content: 78.6
Gene sequence:
>570_bases ATGACCGCCGCCCTTCCCCTTCGCCTGACGACCGCCCCGTTCTGGGCCCGGCTCGCCGCCGTGGCCGGCGGGGCGGGCGT GATGGCGCTCGCCTCGCAGGCCGCGATCCCGATGCAGCCGGTCCCGCTGACCCTGCAGACCCTCGCCCTCTTCGTGCTGG CGGCGGTCCTCGGCGGCTCGCTGACGCTCCGGGCCGTGCTGATCTGGCTGACCGCCGCCGCGCTGGGCGCGCCGGTGCTG GCCGACGGCGAGGGCGGGGCCGCGGCGCTGTTCGGGCCGGCCCAGGGCTACCTCTTCGGCATGGCCGTGGCCGGCGCCCT GGCGGGCCACGCCGCGGCCCGGCGGCAGGACGTCGCCGGCCTCTTCGCCATCTTCCTCGTGGGCCACGCCGTGGTGCTGG CGGTGGGCTGGCTCGGGCTCCTCGAGCGGCTGCCCCCGCGCGAGGCGTTCGTCGCCGGCGTCCTGCCCTTCCTGCCGGGC GCGGCCCTCAAGTCGCTCGCCGCGGCGGGCCTCGTCCGCCTCGTGGCGCTGGCCCTCGCCCGCCACGCCGCGCTAAGGGC TGACGCATGA
Upstream 100 bases:
>100_bases AGCCGCAAGATGGTCTGGCTGGCGTGACGGCGTCCTCCTCTCCCGCCCGTTTCGCGAGGGGAGAGGAGAGATCAGCTTCC GTGCTATCCGCTGCAGGCCC
Downstream 100 bases:
>100_bases AGTTCCTCGACCAGGTGAAGATCTACGTCCGCTCGGGCAACGGCGGCGCCGGCGCCGTCTCGTTCCGGCGCGAGAAGTAC ATCGAGTACGGCGGCCCCGA
Product: conserved hypothetical biotin synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGSLTLRAVLIWLTAAALGAPVL ADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAGLFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPG AALKSLAAAGLVRLVALALARHAALRADA
Sequences:
>Translated_189_residues MTAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGSLTLRAVLIWLTAAALGAPVL ADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAGLFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPG AALKSLAAAGLVRLVALALARHAALRADA >Mature_188_residues TAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGSLTLRAVLIWLTAAALGAPVLA DGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAGLFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPGA ALKSLAAAGLVRLVALALARHAALRADA
Specific function: Probable biotin transporter [H]
COG id: COG1268
COG function: function code R; Uncharacterized conserved protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BioY family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003784 [H]
Pfam domain/function: PF02632 BioY [H]
EC number: NA
Molecular weight: Translated: 18805; Mature: 18674
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGS CCCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCH LTLRAVLIWLTAAALGAPVLADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAG HHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPGAALKSLAAAGLVRLVALALA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RHAALRADA HHHHHHCCC >Mature Secondary Structure TAALPLRLTTAPFWARLAAVAGGAGVMALASQAAIPMQPVPLTLQTLALFVLAAVLGGS CCCCCEEECCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCH LTLRAVLIWLTAAALGAPVLADGEGGAAALFGPAQGYLFGMAVAGALAGHAAARRQDVAG HHHHHHHHHHHHHHHCCCEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH LFAIFLVGHAVVLAVGWLGLLERLPPREAFVAGVLPFLPGAALKSLAAAGLVRLVALALA HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH RHAALRADA HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9679194 [H]