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The map label for this gene is atpH

Identifier: 197103700

GI number: 197103700

Start: 237399

End: 237953

Strand: Direct

Name: atpH

Synonym: PHZ_c0234

Alternate gene names: 197103700

Gene position: 237399-237953 (Clockwise)

Preceding gene: 197103698

Following gene: 197103701

Centisome position: 5.94

GC content: 69.73

Gene sequence:

>555_bases
GTGGCGGATGACTCCAAGTCTTCGAATGTGGGTTCCAGGTACGCCCAGGCCCTGTTCGACCTCGCAAGCGAGCAGAAGGA
GGTCCCGGCCGTGGAGGCCGACCTCAAGTCGCTGAAGGCGGCGATCGCCGACAGCCGCGACCTGCGCGTCCTGCTGGCCT
CGCCGGCGTTCGGCGCGGACGACAAGCGCAAGGGCCTCTCGGCCATCGCCGACAAGGCGAAGTTCAAGCCGACGACCAAG
AAGTTCCTGGGGCTGCTCGCGGCGAACGGCCGCGCCGCGGCCCTGCCCGAGGTGATCTCGGCGTTCGAGCGCCTGGCCGC
CGAGGCCCGCGGCGCCGTCTCGGCCGAGGTCACGACCGCCCTGCCGCTGTCGTCGGCCCAGGCCAAGGGCCTCGCCCAGG
CGCTGCGCCAGGCGCTCGGCAAGGACCCCGAAATCACGACCCGCGTCGATCCCGCCCTGCTGGGCGGCATCAAGGTGAAG
GTCGGTTCCCGCCTCTTCGACGCTTCGCTCCGTTCGAAGCTCGACTCCCTGAAATTCGCCCTCAAGAGAGCGTAA

Upstream 100 bases:

>100_bases
GGCTCTTGGCTCACTGTGCTTTTTTTCAAGCACTTTCAGGCCTTTAGGCCGCGGCGGAAGCTCCGCTGGCGGCACGTGAC
ACGCACCGGGCGAGTTTCAA

Downstream 100 bases:

>100_bases
AGCCCATGGATATCCGCGCCGCCGAAATCTCGGCCATCCTGAAGTCGCAGATCGCCAACTTCGGCGAGGAAGCCGACGTC
TCCGACGTCGGTTCGGTGCT

Product: ATP synthase F1, delta subunit atpH

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MADDSKSSNVGSRYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGADDKRKGLSAIADKAKFKPTTK
KFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTALPLSSAQAKGLAQALRQALGKDPEITTRVDPALLGGIKVK
VGSRLFDASLRSKLDSLKFALKRA

Sequences:

>Translated_184_residues
MADDSKSSNVGSRYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGADDKRKGLSAIADKAKFKPTTK
KFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTALPLSSAQAKGLAQALRQALGKDPEITTRVDPALLGGIKVK
VGSRLFDASLRSKLDSLKFALKRA
>Mature_183_residues
ADDSKSSNVGSRYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGADDKRKGLSAIADKAKFKPTTKK
FLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTALPLSSAQAKGLAQALRQALGKDPEITTRVDPALLGGIKVKV
GSRLFDASLRSKLDSLKFALKRA

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Homo sapiens, GI4502303, Length=172, Percent_Identity=33.1395348837209, Blast_Score=89, Evalue=3e-18,
Organism=Escherichia coli, GI1790173, Length=164, Percent_Identity=25, Blast_Score=63, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71984710, Length=175, Percent_Identity=33.7142857142857, Blast_Score=101, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI71984717, Length=175, Percent_Identity=33.7142857142857, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24647054, Length=164, Percent_Identity=39.0243902439024, Blast_Score=110, Evalue=5e-25,
Organism=Drosophila melanogaster, GI24647056, Length=107, Percent_Identity=42.0560747663551, Blast_Score=86, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_PHEZH (B4RD44)

Other databases:

- EMBL:   CP000747
- RefSeq:   YP_002129077.1
- GeneID:   6789724
- GenomeReviews:   CP000747_GR
- KEGG:   pzu:PHZ_c0234
- HOGENOM:   HBG668108
- OMA:   SIGDKYV
- ProtClustDB:   CLSK891499
- HAMAP:   MF_01416
- InterPro:   IPR000711
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 19261; Mature: 19130

Theoretical pI: Translated: 10.61; Mature: 10.61

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADDSKSSNVGSRYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGAD
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
DKRKGLSAIADKAKFKPTTKKFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTA
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LPLSSAQAKGLAQALRQALGKDPEITTRVDPALLGGIKVKVGSRLFDASLRSKLDSLKFA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LKRA
HHCC
>Mature Secondary Structure 
ADDSKSSNVGSRYAQALFDLASEQKEVPAVEADLKSLKAAIADSRDLRVLLASPAFGAD
CCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCC
DKRKGLSAIADKAKFKPTTKKFLGLLAANGRAAALPEVISAFERLAAEARGAVSAEVTTA
HHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH
LPLSSAQAKGLAQALRQALGKDPEITTRVDPALLGGIKVKVGSRLFDASLRSKLDSLKFA
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
LKRA
HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA