| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103696
Identifier: 197103696
GI number: 197103696
Start: 231823
End: 232560
Strand: Direct
Name: 197103696
Synonym: PHZ_c0230
Alternate gene names: NA
Gene position: 231823-232560 (Clockwise)
Preceding gene: 197103695
Following gene: 197103698
Centisome position: 5.8
GC content: 78.05
Gene sequence:
>738_bases ATGAGTCCCTTCGGCCGAGCCTTCACCGACGGAGACCGGCTGGAGGTGGCCGGGGCGGTCGTGCGCCTGCGCGTGAACCG CCGCGCCCGCCGCGTGTCGCTGCGGCTGGACCGGGCCCGGCGCGAGATCGTCGCCACCGCCCCGAGCCCCCGGCGCCTGG CCGAGGCCGCCGCCTTCGCCAACGACCGCGCCGCCTGGATCGCCGAACGCCTGGCCGAGCTGCCGGCCACGGCGCCCGTC GGGCCGGGCCTGGAGCTGGAGGTGTTCGGCGAGGCGGTGCGGCTGGAGGCCGGGACCGGCCGCGCCCGCTGGCTCGCCCC GGAGGACGGCTCCACGCCGCGCATCGTCGCCATGGGCGAGGGCGAGGGTTACGCCCGGGCGGTGATCCTGGTGCTGCGCC GCCGGGCCCTGGAGGTGCTGACCGAGCGCACCGCCTGGCACTGCGGCCGCCTGGGCGTGGCGGTCCCCAAGGTGACGGTC ACCGACACCCGCTCGCGCTGGGGCTCGTGCCGGCCCGCGGTGGGCCGGCTGCCGGCCTCGATCCGCTATTCCTGGCGCCT GGCGCTCGCCCCCTTCGAGGTGGCCGACTACGTGGCCGCCCACGAGAGCGCGCACCTGCTGGAGCTGAACCACGGCCCCC GCTTCTGGGCCCATGTGCGGGGCCTGGTGGGCGACGAGCGCCGCCACCGCGAGTGGCTCCGCGCCGAAGGCGCCCGGCTC CACGCCTTCGGGCGGTGA
Upstream 100 bases:
>100_bases AAGCGCTTCCGCGAGGAGATCTACCCGCGGGTGAGGGCGTTCATCCGCCGCATCGAAGAGGGCTTCGACAGGACCCGGGC GGCTGCCTAGATAAGGGGCG
Downstream 100 bases:
>100_bases CGGACGCGTCCTAGAACAGCGGCTCCCTAGAACAGCGGTTCCTCGCGGGCGCGGCGGGGCGGGGCCGGCTCGTCGAACTC GGACGGCGGGGTCTCGTCGC
Product: conserved predicted metal-dependent hydrolase
Products: NA
Alternate protein names: Metal-Dependent Hydrolase; Zinc Metallopeptidase; Zinc Metallopeptidases-Like Protein; Conserved Metal-Dependent Hydrolase; Zinc Metallopeptidase-Like Protein; Hydrolase; Zinc Metallopeptidase Protein
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MSPFGRAFTDGDRLEVAGAVVRLRVNRRARRVSLRLDRARREIVATAPSPRRLAEAAAFANDRAAWIAERLAELPATAPV GPGLELEVFGEAVRLEAGTGRARWLAPEDGSTPRIVAMGEGEGYARAVILVLRRRALEVLTERTAWHCGRLGVAVPKVTV TDTRSRWGSCRPAVGRLPASIRYSWRLALAPFEVADYVAAHESAHLLELNHGPRFWAHVRGLVGDERRHREWLRAEGARL HAFGR
Sequences:
>Translated_245_residues MSPFGRAFTDGDRLEVAGAVVRLRVNRRARRVSLRLDRARREIVATAPSPRRLAEAAAFANDRAAWIAERLAELPATAPV GPGLELEVFGEAVRLEAGTGRARWLAPEDGSTPRIVAMGEGEGYARAVILVLRRRALEVLTERTAWHCGRLGVAVPKVTV TDTRSRWGSCRPAVGRLPASIRYSWRLALAPFEVADYVAAHESAHLLELNHGPRFWAHVRGLVGDERRHREWLRAEGARL HAFGR >Mature_244_residues SPFGRAFTDGDRLEVAGAVVRLRVNRRARRVSLRLDRARREIVATAPSPRRLAEAAAFANDRAAWIAERLAELPATAPVG PGLELEVFGEAVRLEAGTGRARWLAPEDGSTPRIVAMGEGEGYARAVILVLRRRALEVLTERTAWHCGRLGVAVPKVTVT DTRSRWGSCRPAVGRLPASIRYSWRLALAPFEVADYVAAHESAHLLELNHGPRFWAHVRGLVGDERRHREWLRAEGARLH AFGR
Specific function: Unknown
COG id: COG1451
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27165; Mature: 27034
Theoretical pI: Translated: 11.76; Mature: 11.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPFGRAFTDGDRLEVAGAVVRLRVNRRARRVSLRLDRARREIVATAPSPRRLAEAAAFA CCCCCCCCCCCCCEEHHHEEEEEEEHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHC NDRAAWIAERLAELPATAPVGPGLELEVFGEAVRLEAGTGRARWLAPEDGSTPRIVAMGE CCHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECCCCCCCCEEEEEEC GEGYARAVILVLRRRALEVLTERTAWHCGRLGVAVPKVTVTDTRSRWGSCRPAVGRLPAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCHHHCCCCCCHHHCCCCC IRYSWRLALAPFEVADYVAAHESAHLLELNHGPRFWAHVRGLVGDERRHREWLRAEGARL EEEEEEEEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCEE HAFGR EECCC >Mature Secondary Structure SPFGRAFTDGDRLEVAGAVVRLRVNRRARRVSLRLDRARREIVATAPSPRRLAEAAAFA CCCCCCCCCCCCEEHHHEEEEEEEHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHC NDRAAWIAERLAELPATAPVGPGLELEVFGEAVRLEAGTGRARWLAPEDGSTPRIVAMGE CCHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCEEEECCCCCCCCEEEEEEC GEGYARAVILVLRRRALEVLTERTAWHCGRLGVAVPKVTVTDTRSRWGSCRPAVGRLPAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCEEEEECCHHHCCCCCCHHHCCCCC IRYSWRLALAPFEVADYVAAHESAHLLELNHGPRFWAHVRGLVGDERRHREWLRAEGARL EEEEEEEEECCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCHHHHHHHHHHCCCEE HAFGR EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA