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The map label for this gene is fdxB [H]

Identifier: 197103681

GI number: 197103681

Start: 212877

End: 213317

Strand: Direct

Name: fdxB [H]

Synonym: PHZ_c0215

Alternate gene names: 197103681

Gene position: 212877-213317 (Clockwise)

Preceding gene: 197103680

Following gene: 197103683

Centisome position: 5.33

GC content: 65.08

Gene sequence:

>441_bases
ATTCATGATGGGCAAGCAGCTCATCGCGAACCGCAAGCCGGTGGACCCCGCAAGGCTTGCCGACCCCACGATTTCCATGA
AAGAGGTCGCCGCTTAAGCGAGCGGCTCACGAGGAGCGCCATGGCCAAGATCACCTACATCGAGCACGACGGCACCGAAC
ACGTCATCGACGTGAAGCCCGGGCTCTCGGTCATGGAAGGCGCGGTGAAGAACAACATCCCGGGCATCGACGCCGACTGC
GGCGGCGCCTGCGCCTGCGCCACCTGCCACGTCTATGTGGACGAGGCGTTCCTGGCCAAGACGGGCACGCGCTCGGCCAT
GGAGGAGTCGATGCTCGACTTCGCCGAGGGCGTCGAGGAGAACAGCCGCCTGTCGTGCCAGATCAAGGTCACCGACGACC
TGGACGGCCTCGTCGTCCGCATGCCCGAGAGCCAGCACTAG

Upstream 100 bases:

>100_bases
AGATCGTGGTGCGGGGCGACCCGGCCACGGCGAAGTTCGCCGTCTTCCACCTGAAGGGGAGCCAGGTGCAGGCCGTCGAG
GCGATCAACGCCCCGCCCGA

Downstream 100 bases:

>100_bases
GGAAGACGCGGCAGGCCCCGCTTGGGTCCCCCGGATCAGCCTTCGGCTGACCGTGGGATGACGAAGGGGGGTGCGGCCCC
CCAACAGCTCGTCATCCTCC

Product: ferredoxin, 2Fe-2S

Products: NA

Alternate protein names: FdII [H]

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MHDGQAAHREPQAGGPRKACRPHDFHERGRRLSERLTRSAMAKITYIEHDGTEHVIDVKPGLSVMEGAVKNNIPGIDADC
GGACACATCHVYVDEAFLAKTGTRSAMEESMLDFAEGVEENSRLSCQIKVTDDLDGLVVRMPESQH

Sequences:

>Translated_146_residues
MHDGQAAHREPQAGGPRKACRPHDFHERGRRLSERLTRSAMAKITYIEHDGTEHVIDVKPGLSVMEGAVKNNIPGIDADC
GGACACATCHVYVDEAFLAKTGTRSAMEESMLDFAEGVEENSRLSCQIKVTDDLDGLVVRMPESQH
>Mature_146_residues
MHDGQAAHREPQAGGPRKACRPHDFHERGRRLSERLTRSAMAKITYIEHDGTEHVIDVKPGLSVMEGAVKNNIPGIDADC
GGACACATCHVYVDEAFLAKTGTRSAMEESMLDFAEGVEENSRLSCQIKVTDDLDGLVVRMPESQH

Specific function: Ferredoxin Are Iron-Sulfur Proteins That Transfer Electrons In A Wide Variety Of Metabolic Reactions. Although The Function Of This Ferredoxin Is Unknown It Is Probable That It Has A Role As A Cellular Electron Transfer Protein. Involved In The In Vivo As

COG id: COG0633

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI4758352, Length=106, Percent_Identity=38.6792452830189, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788874, Length=107, Percent_Identity=40.1869158878505, Blast_Score=64, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17544202, Length=102, Percent_Identity=44.1176470588235, Blast_Score=82, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6325004, Length=101, Percent_Identity=40.5940594059406, Blast_Score=82, Evalue=4e-17,
Organism=Drosophila melanogaster, GI24661503, Length=104, Percent_Identity=33.6538461538462, Blast_Score=69, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001055
- InterPro:   IPR018298
- InterPro:   IPR012675
- InterPro:   IPR001041 [H]

Pfam domain/function: PF00111 Fer2 [H]

EC number: NA

Molecular weight: Translated: 15946; Mature: 15946

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS51085 2FE2S_FER_2 ; PS00814 ADX

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.1 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
4.1 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHDGQAAHREPQAGGPRKACRPHDFHERGRRLSERLTRSAMAKITYIEHDGTEHVIDVKP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCC
GLSVMEGAVKNNIPGIDADCGGACACATCHVYVDEAFLAKTGTRSAMEESMLDFAEGVEE
CHHHHHHHHHCCCCCCCCCCCCCEEHHEEHEEHHHHHHHCCCCHHHHHHHHHHHHHCCCC
NSRLSCQIKVTDDLDGLVVRMPESQH
CCEEEEEEEECCCCCCEEEECCCCCC
>Mature Secondary Structure
MHDGQAAHREPQAGGPRKACRPHDFHERGRRLSERLTRSAMAKITYIEHDGTEHVIDVKP
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCC
GLSVMEGAVKNNIPGIDADCGGACACATCHVYVDEAFLAKTGTRSAMEESMLDFAEGVEE
CHHHHHHHHHCCCCCCCCCCCCCEEHHEEHEEHHHHHHHCCCCHHHHHHHHHHHHHCCCC
NSRLSCQIKVTDDLDGLVVRMPESQH
CCEEEEEEEECCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: 2Fe-2S Cluster. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7751304; 11259647 [H]