| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is glmU [H]
Identifier: 197103668
GI number: 197103668
Start: 199420
End: 200136
Strand: Reverse
Name: glmU [H]
Synonym: PHZ_c0202
Alternate gene names: 197103668
Gene position: 200136-199420 (Counterclockwise)
Preceding gene: 197103669
Following gene: 197103667
Centisome position: 5.01
GC content: 72.66
Gene sequence:
>717_bases GTGAGCCAGGCGCCCACGACGGCGATGGTGCTGGCGGCGGGGCTCGGCACCCGCATGCGGCCGCTGACGGACACCACGCC CAAGTGCCTGGTCCCGGTGGCGGGCCGGCCGCTGATCGACCACGTGCTGGACGAGTTGGTCGCCGCCGGCGTCACCCGCG CCGTGGTCAACGTCCACCACTTCGCCGACCAGGTGGAGGCGCACCTGGCGCGCCGCACGGACCTCGAGATCCGCATCTCC GACGAGCGGGCCGAGCTGCTGGATTCCGGCGGCGGCATCCAGCACGCCCGGCCGCTGCTGGGCGATGAGCCGATCTTCGT CGCCAACATCGACTCGCTGTGGATCACCGAGGGCGAGCCGCCGCTGGAGACCCTGAAGCGGGTCTGGGACCCGGCGGCCA TGGACATCCTCCTGCTGCTGGTCCGCCGCGGCCACGGCCTGGGCTTCGAGGGGCCCAACGGCTTCTTCATGGACGCGCAG GGCCGACTGACCCATTCGGTCGCGCCCAAGCCGCCGACGCCCTACGCCAACACCGGCTTCGGCATCCTCAAGCCCCAGGT CCTCGACGCCTCGCCCAGGACGGGCCCGTTCTCGATCCTGCCGGTCTGGCATGAGCTGCAGGCCGCAGGCCGGCTCCGCG GCGTGGCCATGGACGCTTTCTGGATGCACGTGGGCGACCCCGCCGCGCGCGAGGCGGCGGAGCAGAGGCTGTCGTGA
Upstream 100 bases:
>100_bases TGCCGCGCACCTGGCGCTACCTGGAGCGCAACCTGCAGGATCCCGAGCTCGCCGGCCTGAAGGCCTGGTTCGACCGCCAC GTTCCGCCCGAGGCCCGCGC
Downstream 100 bases:
>100_bases CCCGCTTCTTCGAGCGGCCGGGTCCTCGCTGGTTCAACATCCCGGCGCACCGGCCGTTCGCCGAAGACCTCGCCCGCGGG CTCTACGAGGCCCTGGCCGA
Product: mannose-1-phosphate guanyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine pyrophosphorylase; N-acetylglucosamine-1-phosphate uridyltransferase; Glucosamine-1-phosphate N-acetyltransferase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSQAPTTAMVLAAGLGTRMRPLTDTTPKCLVPVAGRPLIDHVLDELVAAGVTRAVVNVHHFADQVEAHLARRTDLEIRIS DERAELLDSGGGIQHARPLLGDEPIFVANIDSLWITEGEPPLETLKRVWDPAAMDILLLLVRRGHGLGFEGPNGFFMDAQ GRLTHSVAPKPPTPYANTGFGILKPQVLDASPRTGPFSILPVWHELQAAGRLRGVAMDAFWMHVGDPAAREAAEQRLS
Sequences:
>Translated_238_residues MSQAPTTAMVLAAGLGTRMRPLTDTTPKCLVPVAGRPLIDHVLDELVAAGVTRAVVNVHHFADQVEAHLARRTDLEIRIS DERAELLDSGGGIQHARPLLGDEPIFVANIDSLWITEGEPPLETLKRVWDPAAMDILLLLVRRGHGLGFEGPNGFFMDAQ GRLTHSVAPKPPTPYANTGFGILKPQVLDASPRTGPFSILPVWHELQAAGRLRGVAMDAFWMHVGDPAAREAAEQRLS >Mature_237_residues SQAPTTAMVLAAGLGTRMRPLTDTTPKCLVPVAGRPLIDHVLDELVAAGVTRAVVNVHHFADQVEAHLARRTDLEIRISD ERAELLDSGGGIQHARPLLGDEPIFVANIDSLWITEGEPPLETLKRVWDPAAMDILLLLVRRGHGLGFEGPNGFFMDAQG RLTHSVAPKPPTPYANTGFGILKPQVLDASPRTGPFSILPVWHELQAAGRLRGVAMDAFWMHVGDPAAREAAEQRLS
Specific function: Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-GlcNAc. Responsible for the acetylation of Glc-N-1-P to give GlcNAc-1-P and for the uridyl transfer from UTP to GlcNAc-1-P which produces UDP-GlcNAc [H]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Homo sapiens, GI11761621, Length=233, Percent_Identity=28.3261802575107, Blast_Score=77, Evalue=1e-14, Organism=Homo sapiens, GI11761619, Length=233, Percent_Identity=28.3261802575107, Blast_Score=77, Evalue=1e-14, Organism=Escherichia coli, GI1787488, Length=123, Percent_Identity=31.7073170731707, Blast_Score=65, Evalue=5e-12, Organism=Caenorhabditis elegans, GI133931050, Length=233, Percent_Identity=29.6137339055794, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI21355443, Length=232, Percent_Identity=29.7413793103448, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI24644084, Length=232, Percent_Identity=29.7413793103448, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005882 - InterPro: IPR018357 - InterPro: IPR005835 - InterPro: IPR011004 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.23; =2.3.1.157 [H]
Molecular weight: Translated: 25769; Mature: 25638
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQAPTTAMVLAAGLGTRMRPLTDTTPKCLVPVAGRPLIDHVLDELVAAGVTRAVVNVHH CCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH FADQVEAHLARRTDLEIRISDERAELLDSGGGIQHARPLLGDEPIFVANIDSLWITEGEP HHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEECCCC PLETLKRVWDPAAMDILLLLVRRGHGLGFEGPNGFFMDAQGRLTHSVAPKPPTPYANTGF HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCC GILKPQVLDASPRTGPFSILPVWHELQAAGRLRGVAMDAFWMHVGDPAAREAAEQRLS CCCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHEEHHHHHEECCCHHHHHHHHHHCC >Mature Secondary Structure SQAPTTAMVLAAGLGTRMRPLTDTTPKCLVPVAGRPLIDHVLDELVAAGVTRAVVNVHH CCCCHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHH FADQVEAHLARRTDLEIRISDERAELLDSGGGIQHARPLLGDEPIFVANIDSLWITEGEP HHHHHHHHHHHHCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCEEEEECCEEEEECCCC PLETLKRVWDPAAMDILLLLVRRGHGLGFEGPNGFFMDAQGRLTHSVAPKPPTPYANTGF HHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCEEECCCCCCCCCCCCCCC GILKPQVLDASPRTGPFSILPVWHELQAAGRLRGVAMDAFWMHVGDPAAREAAEQRLS CCCCCEEECCCCCCCCEEEEHHHHHHHHHHHHHHEEHHHHHEECCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA