Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is cmk [H]

Identifier: 197103655

GI number: 197103655

Start: 183121

End: 183789

Strand: Direct

Name: cmk [H]

Synonym: PHZ_c0189

Alternate gene names: 197103655

Gene position: 183121-183789 (Clockwise)

Preceding gene: 197103654

Following gene: 197103656

Centisome position: 4.58

GC content: 75.93

Gene sequence:

>669_bases
ATGAGGGGCCCGTTCGTGATCACGGTCGACGGGCCGGCGGCCTCGGGCAAGGGCACGATCGCCAGCCGCCTGGCGCGGGA
ATACGACCTGCCGATGCTGGATTCCGGCCTGCTCTACCGGGCGGTCGGCGTGCTCGCGACCCGGGCGGGCCTCGACCTGG
ACGACGGCGAGGCCGTCGCGCGCCTCGCGCGCGGGCTGAAGGCGGAGCACCTGGGCGATCCCGAGTTCCGCACCCGCGGG
GCGGGCGAGGCGGCGAGCCGGGTGGCGGTGCACACGCCCGTGCGGCTGGCCCTGCGCGACGTGCAGCTCGCCTTCGCGCG
CCGGCCGGGCGGGGCGGTGCTGGACGGCCGCGACCAGGGGACGGTGATCTGCCCCGAGGCGCCGGCGAAGCTGTATGTCA
CCGCGAGCCCCGAGGTGCGCGCCGAGCGGCGCTGGAAGCAGCTGAAGGGCCAGGGCGAGGACGTACCCTACGCGGAGGTG
CTGGCCGACATCGTGCGCCGGGACGAGCGCGACGGCGGGCGGGCCGACTCGCCCATGCGGCCCGCGCCGGACGCCGTCTT
GCTGGACACCTCCGAATTGAGTATAGACGGCGCCTTCGATGCGGCCCGCCGCATCGTCGAGGCGGCGCGCGCCCGCTGGG
GGAGGTCCCAAGAGGACGCCTCCCGGTAG

Upstream 100 bases:

>100_bases
CCACCAGCTTCCCCGGCTTCGTCGAGATGATGCGCGGCCTCGGAGCGGACGTGGGAGCGGACGTGGGAGGGGATGTGGGC
GCGGACTCGCCGGTCGGCGC

Downstream 100 bases:

>100_bases
GGCAATCCAACCGCGCCACACCCTCCGGACGGCCGCGGGCGATCTCACCTCTCAAACCCGACGCCTGGACTCCGCCCGAC
CTCGGTCGGCGGGCCTCGCG

Product: cytidylate monophosphate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MRGPFVITVDGPAASGKGTIASRLAREYDLPMLDSGLLYRAVGVLATRAGLDLDDGEAVARLARGLKAEHLGDPEFRTRG
AGEAASRVAVHTPVRLALRDVQLAFARRPGGAVLDGRDQGTVICPEAPAKLYVTASPEVRAERRWKQLKGQGEDVPYAEV
LADIVRRDERDGGRADSPMRPAPDAVLLDTSELSIDGAFDAARRIVEAARARWGRSQEDASR

Sequences:

>Translated_222_residues
MRGPFVITVDGPAASGKGTIASRLAREYDLPMLDSGLLYRAVGVLATRAGLDLDDGEAVARLARGLKAEHLGDPEFRTRG
AGEAASRVAVHTPVRLALRDVQLAFARRPGGAVLDGRDQGTVICPEAPAKLYVTASPEVRAERRWKQLKGQGEDVPYAEV
LADIVRRDERDGGRADSPMRPAPDAVLLDTSELSIDGAFDAARRIVEAARARWGRSQEDASR
>Mature_222_residues
MRGPFVITVDGPAASGKGTIASRLAREYDLPMLDSGLLYRAVGVLATRAGLDLDDGEAVARLARGLKAEHLGDPEFRTRG
AGEAASRVAVHTPVRLALRDVQLAFARRPGGAVLDGRDQGTVICPEAPAKLYVTASPEVRAERRWKQLKGQGEDVPYAEV
LADIVRRDERDGGRADSPMRPAPDAVLLDTSELSIDGAFDAARRIVEAARARWGRSQEDASR

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=211, Percent_Identity=38.8625592417062, Blast_Score=132, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003136
- InterPro:   IPR011994 [H]

Pfam domain/function: PF02224 Cytidylate_kin [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 23848; Mature: 23848

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGPFVITVDGPAASGKGTIASRLAREYDLPMLDSGLLYRAVGVLATRAGLDLDDGEAVA
CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
RLARGLKAEHLGDPEFRTRGAGEAASRVAVHTPVRLALRDVQLAFARRPGGAVLDGRDQG
HHHHCCCHHCCCCCHHHHCCCCHHHHHEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCC
TVICPEAPAKLYVTASPEVRAERRWKQLKGQGEDVPYAEVLADIVRRDERDGGRADSPMR
CEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PAPDAVLLDTSELSIDGAFDAARRIVEAARARWGRSQEDASR
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRGPFVITVDGPAASGKGTIASRLAREYDLPMLDSGLLYRAVGVLATRAGLDLDDGEAVA
CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHH
RLARGLKAEHLGDPEFRTRGAGEAASRVAVHTPVRLALRDVQLAFARRPGGAVLDGRDQG
HHHHCCCHHCCCCCHHHHCCCCHHHHHEECCCHHHHHHHHHHHHHHCCCCCCEECCCCCC
TVICPEAPAKLYVTASPEVRAERRWKQLKGQGEDVPYAEVLADIVRRDERDGGRADSPMR
CEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
PAPDAVLLDTSELSIDGAFDAARRIVEAARARWGRSQEDASR
CCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA