| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103641
Identifier: 197103641
GI number: 197103641
Start: 170122
End: 171600
Strand: Direct
Name: 197103641
Synonym: PHZ_c0175
Alternate gene names: NA
Gene position: 170122-171600 (Clockwise)
Preceding gene: 197103640
Following gene: 197103643
Centisome position: 4.26
GC content: 57.67
Gene sequence:
>1479_bases ATGCGCTCTGACAAACGGGAGCTCGACAAGATTTTCAAGCGCCGTGATCGCTACGAGATCCCGGACTGGCAGCGTGACGA GGTCTGGGATGTTCCGCGCAAGCAGAAGCTGATCGACTCCATCCTGAGAGGTTGGCGACTTCCGAAATTCTACTTCGTCG TCACGGGGCCACAGACGTATGAGGTCGTGGATGGTCAGCAGAGACTTTCGACCATATTTGAGTTTCTTTCTGGAGAACTG ACCCTCTCTGAGCAAACGGCCGAGGAATTTGGAGGTGCGACCTACGCCGAGCTGCCCGCCGACATCTCCGATCAAGTAGA TGACTTCGAAATCGACTTTGACGAGATCAGCGACGCCTCAGATGACGAGCTGATGGATTTCTTCCAACGGCTGCAGAGTG GCCTGCAGCTGAACTCGAGCGAGAAACTTAACGCGGTTCCAGGCAAGCTGAAGGATTTCTGCAAGAAGTCAGCGAAACAC AAGTTCTTCAAGGACTGCGTTGCATTCAGCGACCGCCGATACGCACACTTTGACGTTATGGCAAAGGTAGCTACCCTCGA AGTGGAGGGTCCGGGAACGGGCCTGAGATATCAGGACGTGAAGCAGGTGTTCGAAAGCAACGCCGGCTTTTCCGAGCAGT CACAGGTGGCGAAACGGATCAAAGCTGCGCTTGACCTGCTCGCTGGGGCGGTGCCCGTCGGCTCGAAGACCTTCCGTAGT CGGTCGATCACACAATCGTTCATTACCATGGTCTGCCACCTGCAGAAGACCACAAGCCTGAAAGGAAAAGAGCAGACAAT CGGGGCCTTCGCCGAGCACTTCGTGAAGTCGCTCGCCGCCGAGGTGGAGAAGGGCCAAGACGCGACTGACGTCGACCTCA TCGCCTTCCAGAAGAGCGTCAACGCCAATGTGAAGGCTGGCCCGATCGTCCGGCAGCAGGTACTGCTCCGGAAGCTCTTC CAGTTCGCCCCGGACTTCCTCGACGCCGTGGATCCACAGGCGCTCGCCGGTGCGAACTTCAGCGGCGAGATCGCCAGTGT TGCGAAGGCGATCCGCGCCGATATCCAGGCAATCAATGAAGCCTACGCCGGGACCCATGGCTCAGATCTGTTCAAGGCTA CCAGCAAGACCGCTGAGGCCCAGGCGGTCATCGGGGAACCCGCAACCAACTACGACGCCTACAAAACCCTAGTGGACAAT ATGTATTTCCTCTTTTGGGAGGGACCAGGGCCGAAGATCGACAGGCCGGCGTCATTCAAGGACGTCAACGCTCTCCGGAC AGAGCTCCAGCACGACACTGACCACGGGAATGCCAAAGACGTAGCGAAGAAGAAAATGAAGAACGCCAGCGTCTTCCAGA AGTACGCCGGTACCGCCTCGCCGCTCGTGGCCGCGCCTGCCCGCTTCCAAGTCCTGCAGTTGAATCTGCTGAGAGAGATC CGCAACGACCTACAGGCGATGCTTGCCGAACTTGCGTGA
Upstream 100 bases:
>100_bases CGTTGAGCGGATGGATTGCGTTGCTGTAAGTCTCGCCCGATACGCGTCGTGGCCGCCGCGGACGAACCGCGGTCGCGTAG TGGGGGACTAAGCAGTGGAA
Downstream 100 bases:
>100_bases GCGCTGGAGGTAGCGCTGGCGACCCCCGCGCCGCGCCTGATCGCGGCTTTCCCACCCCGATCGCTGCGCGATCTGGCCCT CCCCAGACGGGGGCCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 492; Mature: 492
Protein sequence:
>492_residues MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTYEVVDGQQRLSTIFEFLSGEL TLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDASDDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKH KFFKDCVAFSDRRYAHFDVMAKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSVNANVKAGPIVRQQVLLRKLF QFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINEAYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDN MYFLFWEGPGPKIDRPASFKDVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI RNDLQAMLAELA
Sequences:
>Translated_492_residues MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTYEVVDGQQRLSTIFEFLSGEL TLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDASDDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKH KFFKDCVAFSDRRYAHFDVMAKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSVNANVKAGPIVRQQVLLRKLF QFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINEAYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDN MYFLFWEGPGPKIDRPASFKDVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI RNDLQAMLAELA >Mature_492_residues MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTYEVVDGQQRLSTIFEFLSGEL TLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDASDDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKH KFFKDCVAFSDRRYAHFDVMAKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSVNANVKAGPIVRQQVLLRKLF QFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINEAYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDN MYFLFWEGPGPKIDRPASFKDVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI RNDLQAMLAELA
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54887; Mature: 54887
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTY CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEE EVVDGQQRLSTIFEFLSGELTLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDAS ECCCHHHHHHHHHHHHCCCCEECHHHHHHHCCCCHHHCCCCHHCCCCCCCCCHHHCCCCC DDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKHKFFKDCVAFSDRRYAHFDVM CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS HHHHEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC NANVKAGPIVRQQVLLRKLFQFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINE CCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH AYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDNMYFLFWEGPGPKIDRPASFK HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCHH DVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH RNDLQAMLAELA HHHHHHHHHHHC >Mature Secondary Structure MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTY CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEE EVVDGQQRLSTIFEFLSGELTLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDAS ECCCHHHHHHHHHHHHCCCCEECHHHHHHHCCCCHHHCCCCHHCCCCCCCCCHHHCCCCC DDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKHKFFKDCVAFSDRRYAHFDVM CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH AKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS HHHHEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSV HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC NANVKAGPIVRQQVLLRKLFQFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINE CCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH AYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDNMYFLFWEGPGPKIDRPASFK HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCHH DVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH RNDLQAMLAELA HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA