Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197103641

Identifier: 197103641

GI number: 197103641

Start: 170122

End: 171600

Strand: Direct

Name: 197103641

Synonym: PHZ_c0175

Alternate gene names: NA

Gene position: 170122-171600 (Clockwise)

Preceding gene: 197103640

Following gene: 197103643

Centisome position: 4.26

GC content: 57.67

Gene sequence:

>1479_bases
ATGCGCTCTGACAAACGGGAGCTCGACAAGATTTTCAAGCGCCGTGATCGCTACGAGATCCCGGACTGGCAGCGTGACGA
GGTCTGGGATGTTCCGCGCAAGCAGAAGCTGATCGACTCCATCCTGAGAGGTTGGCGACTTCCGAAATTCTACTTCGTCG
TCACGGGGCCACAGACGTATGAGGTCGTGGATGGTCAGCAGAGACTTTCGACCATATTTGAGTTTCTTTCTGGAGAACTG
ACCCTCTCTGAGCAAACGGCCGAGGAATTTGGAGGTGCGACCTACGCCGAGCTGCCCGCCGACATCTCCGATCAAGTAGA
TGACTTCGAAATCGACTTTGACGAGATCAGCGACGCCTCAGATGACGAGCTGATGGATTTCTTCCAACGGCTGCAGAGTG
GCCTGCAGCTGAACTCGAGCGAGAAACTTAACGCGGTTCCAGGCAAGCTGAAGGATTTCTGCAAGAAGTCAGCGAAACAC
AAGTTCTTCAAGGACTGCGTTGCATTCAGCGACCGCCGATACGCACACTTTGACGTTATGGCAAAGGTAGCTACCCTCGA
AGTGGAGGGTCCGGGAACGGGCCTGAGATATCAGGACGTGAAGCAGGTGTTCGAAAGCAACGCCGGCTTTTCCGAGCAGT
CACAGGTGGCGAAACGGATCAAAGCTGCGCTTGACCTGCTCGCTGGGGCGGTGCCCGTCGGCTCGAAGACCTTCCGTAGT
CGGTCGATCACACAATCGTTCATTACCATGGTCTGCCACCTGCAGAAGACCACAAGCCTGAAAGGAAAAGAGCAGACAAT
CGGGGCCTTCGCCGAGCACTTCGTGAAGTCGCTCGCCGCCGAGGTGGAGAAGGGCCAAGACGCGACTGACGTCGACCTCA
TCGCCTTCCAGAAGAGCGTCAACGCCAATGTGAAGGCTGGCCCGATCGTCCGGCAGCAGGTACTGCTCCGGAAGCTCTTC
CAGTTCGCCCCGGACTTCCTCGACGCCGTGGATCCACAGGCGCTCGCCGGTGCGAACTTCAGCGGCGAGATCGCCAGTGT
TGCGAAGGCGATCCGCGCCGATATCCAGGCAATCAATGAAGCCTACGCCGGGACCCATGGCTCAGATCTGTTCAAGGCTA
CCAGCAAGACCGCTGAGGCCCAGGCGGTCATCGGGGAACCCGCAACCAACTACGACGCCTACAAAACCCTAGTGGACAAT
ATGTATTTCCTCTTTTGGGAGGGACCAGGGCCGAAGATCGACAGGCCGGCGTCATTCAAGGACGTCAACGCTCTCCGGAC
AGAGCTCCAGCACGACACTGACCACGGGAATGCCAAAGACGTAGCGAAGAAGAAAATGAAGAACGCCAGCGTCTTCCAGA
AGTACGCCGGTACCGCCTCGCCGCTCGTGGCCGCGCCTGCCCGCTTCCAAGTCCTGCAGTTGAATCTGCTGAGAGAGATC
CGCAACGACCTACAGGCGATGCTTGCCGAACTTGCGTGA

Upstream 100 bases:

>100_bases
CGTTGAGCGGATGGATTGCGTTGCTGTAAGTCTCGCCCGATACGCGTCGTGGCCGCCGCGGACGAACCGCGGTCGCGTAG
TGGGGGACTAAGCAGTGGAA

Downstream 100 bases:

>100_bases
GCGCTGGAGGTAGCGCTGGCGACCCCCGCGCCGCGCCTGATCGCGGCTTTCCCACCCCGATCGCTGCGCGATCTGGCCCT
CCCCAGACGGGGGCCTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 492; Mature: 492

Protein sequence:

>492_residues
MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTYEVVDGQQRLSTIFEFLSGEL
TLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDASDDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKH
KFFKDCVAFSDRRYAHFDVMAKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS
RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSVNANVKAGPIVRQQVLLRKLF
QFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINEAYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDN
MYFLFWEGPGPKIDRPASFKDVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI
RNDLQAMLAELA

Sequences:

>Translated_492_residues
MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTYEVVDGQQRLSTIFEFLSGEL
TLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDASDDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKH
KFFKDCVAFSDRRYAHFDVMAKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS
RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSVNANVKAGPIVRQQVLLRKLF
QFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINEAYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDN
MYFLFWEGPGPKIDRPASFKDVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI
RNDLQAMLAELA
>Mature_492_residues
MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTYEVVDGQQRLSTIFEFLSGEL
TLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDASDDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKH
KFFKDCVAFSDRRYAHFDVMAKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS
RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSVNANVKAGPIVRQQVLLRKLF
QFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINEAYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDN
MYFLFWEGPGPKIDRPASFKDVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI
RNDLQAMLAELA

Specific function: Unknown

COG id: COG1479

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54887; Mature: 54887

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEE
EVVDGQQRLSTIFEFLSGELTLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDAS
ECCCHHHHHHHHHHHHCCCCEECHHHHHHHCCCCHHHCCCCHHCCCCCCCCCHHHCCCCC
DDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKHKFFKDCVAFSDRRYAHFDVM
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS
HHHHEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NANVKAGPIVRQQVLLRKLFQFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINE
CCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDNMYFLFWEGPGPKIDRPASFK
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCHH
DVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH
RNDLQAMLAELA
HHHHHHHHHHHC
>Mature Secondary Structure
MRSDKRELDKIFKRRDRYEIPDWQRDEVWDVPRKQKLIDSILRGWRLPKFYFVVTGPQTY
CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEE
EVVDGQQRLSTIFEFLSGELTLSEQTAEEFGGATYAELPADISDQVDDFEIDFDEISDAS
ECCCHHHHHHHHHHHHCCCCEECHHHHHHHCCCCHHHCCCCHHCCCCCCCCCHHHCCCCC
DDELMDFFQRLQSGLQLNSSEKLNAVPGKLKDFCKKSAKHKFFKDCVAFSDRRYAHFDVM
CHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
AKVATLEVEGPGTGLRYQDVKQVFESNAGFSEQSQVAKRIKAALDLLAGAVPVGSKTFRS
HHHHEEEECCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
RSITQSFITMVCHLQKTTSLKGKEQTIGAFAEHFVKSLAAEVEKGQDATDVDLIAFQKSV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHC
NANVKAGPIVRQQVLLRKLFQFAPDFLDAVDPQALAGANFSGEIASVAKAIRADIQAINE
CCCCCCCHHHHHHHHHHHHHHHCHHHHHHCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AYAGTHGSDLFKATSKTAEAQAVIGEPATNYDAYKTLVDNMYFLFWEGPGPKIDRPASFK
HHCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCCCHH
DVNALRTELQHDTDHGNAKDVAKKKMKNASVFQKYAGTASPLVAAPARFQVLQLNLLREI
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHCCCHHHHHHHHHHHHHH
RNDLQAMLAELA
HHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA