| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
Click here to switch to the map view.
The map label for this gene is 197103569
Identifier: 197103569
GI number: 197103569
Start: 94946
End: 95350
Strand: Reverse
Name: 197103569
Synonym: PHZ_c0103
Alternate gene names: NA
Gene position: 95350-94946 (Counterclockwise)
Preceding gene: 197103570
Following gene: 197103568
Centisome position: 2.39
GC content: 70.37
Gene sequence:
>405_bases ATGGCGGGCTGGCTGGTGAAGTCGGAACCCAACACCTACAGCTTCGAGGACCTGCAGCGCGACGGCCGCACCGTCTGGGA CGGCGTCCGCAACAACGCCGCGGCCCTGCACCTGAAGGCGATGAAGGCGGGCGACGAGGTGCTCTTCTACCATTCCCAGG AAGGCCTGGCGGTGGTGGGGATCGCCAGGGTCTCCCGCGAGGCCTTCCCGGACGCCACCGACCCTTCCGGCCGTTTCGTC GCCGTCGAGCTCGAGCCCGTGCGGCCGCTGGCCAGACCCGTGACCCTGGCCGAGATGAAGGCGAACCCCGCCCTCTCCGA AATGGCGATGCTGCGGCAGTCGCGGCTGTCGGTCTCGCCCGTCCGCCCCGAGGAATGGCGCGCGATCCTGGGCATGGCCG GCTGA
Upstream 100 bases:
>100_bases GGCCCTGGAGAAGGGGGCGCGCACGCCGGATCTCGGCGGTAAGCTCACCACGATCCAGATGGGCGAGGCGGTGCTCGCCG AACTCTAGCGGGAGGGGACG
Downstream 100 bases:
>100_bases GGGCGCACTCAACCCTCTCGCGCCGCACTCGCCTTAAGGTCGTGTTAAAGAACAAGTTCCCGGCAAGCTCGTGTTAACCG TGCTCACGGCAAAGCTTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAGWLVKSEPNTYSFEDLQRDGRTVWDGVRNNAAALHLKAMKAGDEVLFYHSQEGLAVVGIARVSREAFPDATDPSGRFV AVELEPVRPLARPVTLAEMKANPALSEMAMLRQSRLSVSPVRPEEWRAILGMAG
Sequences:
>Translated_134_residues MAGWLVKSEPNTYSFEDLQRDGRTVWDGVRNNAAALHLKAMKAGDEVLFYHSQEGLAVVGIARVSREAFPDATDPSGRFV AVELEPVRPLARPVTLAEMKANPALSEMAMLRQSRLSVSPVRPEEWRAILGMAG >Mature_133_residues AGWLVKSEPNTYSFEDLQRDGRTVWDGVRNNAAALHLKAMKAGDEVLFYHSQEGLAVVGIARVSREAFPDATDPSGRFVA VELEPVRPLARPVTLAEMKANPALSEMAMLRQSRLSVSPVRPEEWRAILGMAG
Specific function: Unknown
COG id: COG2947
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI83267861, Length=165, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI40806221, Length=165, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=1e-16, Organism=Homo sapiens, GI7661804, Length=165, Percent_Identity=33.3333333333333, Blast_Score=82, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14733; Mature: 14602
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGWLVKSEPNTYSFEDLQRDGRTVWDGVRNNAAALHLKAMKAGDEVLFYHSQEGLAVVG CCCCEECCCCCCCCHHHHHHCCCEEHHHCCCCCEEEEEEEECCCCEEEEEECCCCEEEEE IARVSREAFPDATDPSGRFVAVELEPVRPLARPVTLAEMKANPALSEMAMLRQSRLSVSP HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEHHCCCCCHHHHHHHHHHCCCCCC VRPEEWRAILGMAG CCHHHHHHHHCCCC >Mature Secondary Structure AGWLVKSEPNTYSFEDLQRDGRTVWDGVRNNAAALHLKAMKAGDEVLFYHSQEGLAVVG CCCEECCCCCCCCHHHHHHCCCEEHHHCCCCCEEEEEEEECCCCEEEEEECCCCEEEEE IARVSREAFPDATDPSGRFVAVELEPVRPLARPVTLAEMKANPALSEMAMLRQSRLSVSP HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEHHCCCCCHHHHHHHHHHCCCCCC VRPEEWRAILGMAG CCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA