| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197103542
Identifier: 197103542
GI number: 197103542
Start: 73152
End: 73811
Strand: Direct
Name: 197103542
Synonym: PHZ_c0076
Alternate gene names: NA
Gene position: 73152-73811 (Clockwise)
Preceding gene: 197103540
Following gene: 197103543
Centisome position: 1.83
GC content: 68.64
Gene sequence:
>660_bases ATGAGCATCGAGGCGGTGATCTGGGATTTCGGCGGGGTGTTCACCTCCTCGCCCTTCGAGGCCTTCAACCGCTACGAGGC CGAGAAGGGGCTGCCGCGGGACTTCATCCGGCGGGTGAACGCCACCAACCCCGACCACAACGCCTGGGCGCTGTTCGAGC GCAACGAGATCGACGCCTTCCGCTTCGACGAGCTGTTCCTGGCTGAGTCCACGACCCTGGGCCATCCGGTCCCCGGCCGC GAGGTGCTGCCGCTGCTGTCGGGCCAGCTGCGCCCGCGGATGGTGGCGGCGCTCAAGGCGTGCAAGGCGCAGTTCAAGGT GGGCTGCATCACCAACAACGTCGTCTCCGAGCACAGCCCCGGCCAGGACGAGGGCCAGCGGATGGCCGGCGCCATGGCCC AGGTGATGCCGCTGTTCGACGCCATCATCGAGAGCAGCAAGGCCGGCGTGCGCAAGCCCGACCCGCGGATCTACCTGATG ATGTGCGACCTGCTGGACGTGCGGCCCGAGGCCTGCGTCTACCTCGACGACCTGGGTATCAACTGCAAGCCGGCCGCGGG CCTGGGCATGCAGGCCATCAAGGTGACCACCGAGGCCCAGGCGCTGGCCGACCTGTCGGCCATCGTCGGCCTCGACTTCC CCGAGGAGGAGCCGGCATGA
Upstream 100 bases:
>100_bases GACGGCGAGGGGCAGGCGGTCGGGGCGCATCGGCCCTTAGTTGCACGGCCGGCGCAGCCTCTCTAGACCGCTGGTGACGA TCAGGAAGGCGGAGCGGCGG
Downstream 100 bases:
>100_bases GCCGCCCCAAGAAGATCGGCGCCGAGGCGGCGCTGGCGCGCCTGCCGACCTGGGCCAAGGCCGAGGGCGGGCGCGATGCG ATCTGCAAGACCTTCCGCTT
Product: hydrolase, haloacid dehalogenase-like family
Products: NA
Alternate protein names: Hydrolase; HAD Family Phosphatase; Epoxide Hydrolase Domain-Containing Phosphatase; Phosphatase; HAD-Superfamily Hydrolase Subfamily IA; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; HAD Family Hydrolase; Phosphoglycolate Phosphatase; Epoxide Hydrolase-Like Phosphatase; Epoxide Hydrolase
Number of amino acids: Translated: 219; Mature: 218
Protein sequence:
>219_residues MSIEAVIWDFGGVFTSSPFEAFNRYEAEKGLPRDFIRRVNATNPDHNAWALFERNEIDAFRFDELFLAESTTLGHPVPGR EVLPLLSGQLRPRMVAALKACKAQFKVGCITNNVVSEHSPGQDEGQRMAGAMAQVMPLFDAIIESSKAGVRKPDPRIYLM MCDLLDVRPEACVYLDDLGINCKPAAGLGMQAIKVTTEAQALADLSAIVGLDFPEEEPA
Sequences:
>Translated_219_residues MSIEAVIWDFGGVFTSSPFEAFNRYEAEKGLPRDFIRRVNATNPDHNAWALFERNEIDAFRFDELFLAESTTLGHPVPGR EVLPLLSGQLRPRMVAALKACKAQFKVGCITNNVVSEHSPGQDEGQRMAGAMAQVMPLFDAIIESSKAGVRKPDPRIYLM MCDLLDVRPEACVYLDDLGINCKPAAGLGMQAIKVTTEAQALADLSAIVGLDFPEEEPA >Mature_218_residues SIEAVIWDFGGVFTSSPFEAFNRYEAEKGLPRDFIRRVNATNPDHNAWALFERNEIDAFRFDELFLAESTTLGHPVPGRE VLPLLSGQLRPRMVAALKACKAQFKVGCITNNVVSEHSPGQDEGQRMAGAMAQVMPLFDAIIESSKAGVRKPDPRIYLMM CDLLDVRPEACVYLDDLGINCKPAAGLGMQAIKVTTEAQALADLSAIVGLDFPEEEPA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI48976061, Length=226, Percent_Identity=31.4159292035398, Blast_Score=92, Evalue=4e-19, Organism=Homo sapiens, GI211971008, Length=207, Percent_Identity=31.8840579710145, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI27597073, Length=123, Percent_Identity=35.7723577235772, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17562446, Length=222, Percent_Identity=31.0810810810811, Blast_Score=102, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17557590, Length=118, Percent_Identity=38.135593220339, Blast_Score=84, Evalue=6e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24029; Mature: 23898
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEAVIWDFGGVFTSSPFEAFNRYEAEKGLPRDFIRRVNATNPDHNAWALFERNEIDAF CCCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCE RFDELFLAESTTLGHPVPGREVLPLLSGQLRPRMVAALKACKAQFKVGCITNNVVSEHSP EHHHHHEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCHHHCCCC GQDEGQRMAGAMAQVMPLFDAIIESSKAGVRKPDPRIYLMMCDLLDVRPEACVYLDDLGI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCCCCCEEEEECCCC NCKPAAGLGMQAIKVTTEAQALADLSAIVGLDFPEEEPA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SIEAVIWDFGGVFTSSPFEAFNRYEAEKGLPRDFIRRVNATNPDHNAWALFERNEIDAF CCEEEEECCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCEEEEEECCCCCCE RFDELFLAESTTLGHPVPGREVLPLLSGQLRPRMVAALKACKAQFKVGCITNNVVSEHSP EHHHHHEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHEEEEEECCHHHCCCC GQDEGQRMAGAMAQVMPLFDAIIESSKAGVRKPDPRIYLMMCDLLDVRPEACVYLDDLGI CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECHHHCCCCCEEEEECCCC NCKPAAGLGMQAIKVTTEAQALADLSAIVGLDFPEEEPA CCCCCCCCCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA