| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is argG [H]
Identifier: 197103514
GI number: 197103514
Start: 38611
End: 39885
Strand: Reverse
Name: argG [H]
Synonym: PHZ_c0048
Alternate gene names: 197103514
Gene position: 39885-38611 (Counterclockwise)
Preceding gene: 197103515
Following gene: 197103512
Centisome position: 1.0
GC content: 67.61
Gene sequence:
>1275_bases ATGGCCGACAAGAAGCCCGTCAAGAAGGTCGTGCTCGCCTACTCCGGCGGCCTCGACACCTCGATCATCCTGAAGTGGCT GCAGACCGAGTACCGCGCCGAGGTGGTCACCTTCACCGCCGACCTCGGCCAGGGCGAGGAGCTGACCCCCGCCCGCGAGA AGGCGCTGATGCTGGGCATCAAGCCCGAGAACATCTTCATCGACGACCTGCGCGAGGAGTTCGTCCGGGACTTCGTCTTC CCGATGTTCCGCGCCAACACCGTCTACGAGGGCCAGTACCTGCTCGGCACCTCGATCGCCCGGCCGCTGATCGCCAAGCG CCAGATCGAGATCGCCCGCCAGGTTGGCGCCGACGCCGTCTGCCACGGCGCCACGGGCAAGGGGAACGACCAGGTCCGCT TCGAGCTGGGCTACTACGCCCTCGAGCCCGACATCCGGGTGATCGCCCCCTGGCGCGAATGGGACTTCCGCAGCCGCGAG GCCCTGATCGACTTCGCCGAGAAGCACCAGATCCCGATCAGCAAGGACAAGCGCGGCGAGGCGCCGTTCAGCGTGGACGC CAACCTGCTGCACTCCTCCTCGGAAGGTAAGGTGCTGGAAGACCCTTCGGTCGAGGCCCCCGAGTTCGTGCACATGCGCA CGATCGCCCCCGAGGACGCGCCCGACAAGGCGACCGTCATCACCATCGACTTCGAGAAGGGCGACCCCGTCGCCATCGAC GGCCAGAAGCTGTCGCCCGCCGCCCTGCTGGCGAGGCTGAACGAGCTCGGCCACGACAATGGGATCGGCCGCCTCGACCT GGTGGAGAATCGCTTCGTCGGCATGAAGTCGCGCGGCGTCTACGAGACGCCCGGCGGGACCATCCTGCTCGCCGCCCACC GCGGCATCGAGAGCATCACCCTCGACCGGGGCGCCATGCACCTGAAGGACGAGCTGATGCCGAAGTACGCCGGCCTGATC TACAACGGCTTCTGGTTCTCGGCCGAGCGCGAGATGCTGCAGGCGGCCATCGACAAGAGCCAGGAGCCGGTGGCCGGCCA GGTGCGGGTCAAGCTCTACAAGGGCAATGTCACGGTCATCGGCCGCACCAGCCCCTACTCGCTCTACGACCAGGAGCTGG TGACCTTCGAGGAAGGCGCGGTCGCCTACGACCACCGCGACGCCGAGGGCTTCATCAAGCTGAACGCCCTGCGCCTGCGG GTCATGGCCAATCGCGACCGCCGCCGGGGCAAGCCGCTGGCGGAGATCCCCGACGGCGAACACTTCACGGGCTAG
Upstream 100 bases:
>100_bases GGAGGACGAAGGCGCACTCAGGCCTTGAACCGCAGAGCCGCGTGCCCTTAAAGGCGCGCGACCGTTCCTCCGCACCTCAT TTCGCAAGGTCCCAGCCCCG
Downstream 100 bases:
>100_bases CCGTCCAGGCGGTTGTAAGGATAGCGGTCGCGGATCTCGGCCTGGAAGAACCGCCCCTTCGACGGGGCGTCCAGGAACGA GCGGTGCACCTCGCCCGGCA
Product: argininosuccinate synthase
Products: NA
Alternate protein names: Citrulline--aspartate ligase [H]
Number of amino acids: Translated: 424; Mature: 423
Protein sequence:
>424_residues MADKKPVKKVVLAYSGGLDTSIILKWLQTEYRAEVVTFTADLGQGEELTPAREKALMLGIKPENIFIDDLREEFVRDFVF PMFRANTVYEGQYLLGTSIARPLIAKRQIEIARQVGADAVCHGATGKGNDQVRFELGYYALEPDIRVIAPWREWDFRSRE ALIDFAEKHQIPISKDKRGEAPFSVDANLLHSSSEGKVLEDPSVEAPEFVHMRTIAPEDAPDKATVITIDFEKGDPVAID GQKLSPAALLARLNELGHDNGIGRLDLVENRFVGMKSRGVYETPGGTILLAAHRGIESITLDRGAMHLKDELMPKYAGLI YNGFWFSAEREMLQAAIDKSQEPVAGQVRVKLYKGNVTVIGRTSPYSLYDQELVTFEEGAVAYDHRDAEGFIKLNALRLR VMANRDRRRGKPLAEIPDGEHFTG
Sequences:
>Translated_424_residues MADKKPVKKVVLAYSGGLDTSIILKWLQTEYRAEVVTFTADLGQGEELTPAREKALMLGIKPENIFIDDLREEFVRDFVF PMFRANTVYEGQYLLGTSIARPLIAKRQIEIARQVGADAVCHGATGKGNDQVRFELGYYALEPDIRVIAPWREWDFRSRE ALIDFAEKHQIPISKDKRGEAPFSVDANLLHSSSEGKVLEDPSVEAPEFVHMRTIAPEDAPDKATVITIDFEKGDPVAID GQKLSPAALLARLNELGHDNGIGRLDLVENRFVGMKSRGVYETPGGTILLAAHRGIESITLDRGAMHLKDELMPKYAGLI YNGFWFSAEREMLQAAIDKSQEPVAGQVRVKLYKGNVTVIGRTSPYSLYDQELVTFEEGAVAYDHRDAEGFIKLNALRLR VMANRDRRRGKPLAEIPDGEHFTG >Mature_423_residues ADKKPVKKVVLAYSGGLDTSIILKWLQTEYRAEVVTFTADLGQGEELTPAREKALMLGIKPENIFIDDLREEFVRDFVFP MFRANTVYEGQYLLGTSIARPLIAKRQIEIARQVGADAVCHGATGKGNDQVRFELGYYALEPDIRVIAPWREWDFRSREA LIDFAEKHQIPISKDKRGEAPFSVDANLLHSSSEGKVLEDPSVEAPEFVHMRTIAPEDAPDKATVITIDFEKGDPVAIDG QKLSPAALLARLNELGHDNGIGRLDLVENRFVGMKSRGVYETPGGTILLAAHRGIESITLDRGAMHLKDELMPKYAGLIY NGFWFSAEREMLQAAIDKSQEPVAGQVRVKLYKGNVTVIGRTSPYSLYDQELVTFEEGAVAYDHRDAEGFIKLNALRLRV MANRDRRRGKPLAEIPDGEHFTG
Specific function: Arginine biosynthesis; seventh step. [C]
COG id: COG0137
COG function: function code E; Argininosuccinate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the argininosuccinate synthase family. Type 1 subfamily [H]
Homologues:
Organism=Homo sapiens, GI53759107, Length=400, Percent_Identity=48.25, Blast_Score=357, Evalue=1e-98, Organism=Homo sapiens, GI16950633, Length=400, Percent_Identity=48.25, Blast_Score=357, Evalue=1e-98, Organism=Escherichia coli, GI1789563, Length=417, Percent_Identity=26.378896882494, Blast_Score=124, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6324514, Length=421, Percent_Identity=43.4679334916865, Blast_Score=330, Evalue=2e-91, Organism=Drosophila melanogaster, GI21358151, Length=408, Percent_Identity=45.0980392156863, Blast_Score=338, Evalue=3e-93,
Paralogues:
None
Copy number: 380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001518 - InterPro: IPR018223 - InterPro: IPR014729 [H]
Pfam domain/function: PF00764 Arginosuc_synth [H]
EC number: =6.3.4.5 [H]
Molecular weight: Translated: 47343; Mature: 47211
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: PS00564 ARGININOSUCCIN_SYN_1 ; PS00565 ARGININOSUCCIN_SYN_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADKKPVKKVVLAYSGGLDTSIILKWLQTEYRAEVVTFTADLGQGEELTPAREKALMLGI CCCCCCHHHEEEEECCCCCHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCHHCCEEEEEC KPENIFIDDLREEFVRDFVFPMFRANTVYEGQYLLGTSIARPLIAKRQIEIARQVGADAV CCCCEEHHHHHHHHHHHHHHHHHHCCEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCCE CHGATGKGNDQVRFELGYYALEPDIRVIAPWREWDFRSREALIDFAEKHQIPISKDKRGE EECCCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC APFSVDANLLHSSSEGKVLEDPSVEAPEFVHMRTIAPEDAPDKATVITIDFEKGDPVAID CCCEECHHHEECCCCCCEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEC GQKLSPAALLARLNELGHDNGIGRLDLVENRFVGMKSRGVYETPGGTILLAAHRGIESIT CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEECCCCEEEEEECCCCCEEE LDRGAMHLKDELMPKYAGLIYNGFWFSAEREMLQAAIDKSQEPVAGQVRVKLYKGNVTVI ECCCCHHHHHHHHHHHHCEEEECEEEHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEE GRTSPYSLYDQELVTFEEGAVAYDHRDAEGFIKLNALRLRVMANRDRRRGKPLAEIPDGE ECCCCCCCCCCCEEEEECCCEEECCCCCCCEEEEEEEEEEEEECCHHHCCCCCCCCCCCC HFTG CCCC >Mature Secondary Structure ADKKPVKKVVLAYSGGLDTSIILKWLQTEYRAEVVTFTADLGQGEELTPAREKALMLGI CCCCCHHHEEEEECCCCCHHHHHHHHHHHHCEEEEEEEECCCCCCCCCCHHCCEEEEEC KPENIFIDDLREEFVRDFVFPMFRANTVYEGQYLLGTSIARPLIAKRQIEIARQVGADAV CCCCEEHHHHHHHHHHHHHHHHHHCCEEECCCEEECHHHHHHHHHHHHHHHHHHCCCCCE CHGATGKGNDQVRFELGYYALEPDIRVIAPWREWDFRSREALIDFAEKHQIPISKDKRGE EECCCCCCCCEEEEEEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC APFSVDANLLHSSSEGKVLEDPSVEAPEFVHMRTIAPEDAPDKATVITIDFEKGDPVAID CCCEECHHHEECCCCCCEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCCCCEEEC GQKLSPAALLARLNELGHDNGIGRLDLVENRFVGMKSRGVYETPGGTILLAAHRGIESIT CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCEECCCCEEEEEECCCCCEEE LDRGAMHLKDELMPKYAGLIYNGFWFSAEREMLQAAIDKSQEPVAGQVRVKLYKGNVTVI ECCCCHHHHHHHHHHHHCEEEECEEEHHHHHHHHHHHCCCCCCCCCEEEEEEEECCEEEE GRTSPYSLYDQELVTFEEGAVAYDHRDAEGFIKLNALRLRVMANRDRRRGKPLAEIPDGE ECCCCCCCCCCCEEEEECCCEEECCCCCCCEEEEEEEEEEEEECCHHHCCCCCCCCCCCC HFTG CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA